BAC Information

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BAC

Clone NameB6Ng01-191F24
Chromosome17 (Build37)
Map Location 73,156,328 - 73,255,257
singlet/doubletdoublet
Overlap geneYpel5
Upstream geneClip4, Alk
Downstream geneLbh, Lycat, LOC668709, Capn13, LOC100043666, Galnt14, Ehd3, LOC240160, Xdh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191F24.bB6Ng01-191F24.g
ACCGA014883GA014884
length8331,064
definitionB6Ng01-191F24.b B6Ng01-191F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,254,431 - 73,255,257)(73,156,328 - 73,157,393)
sequence
gaattctggtctagattgaaaacaccccagtgcaagtgccggaggatcca
tagcacacaccaaggtagcaactgctctaggcttgacctgttcctgcctt
ctatgtttctctctctctccaaagtctctcactttctaaaagcctgtgct
ctaccctctatggctattataagcgtgaattcttcctagaaggatgtaaa
atattaataacaaaaacaaaaccaagtaatgccttttggggaggctgttt
gttttgggttttatctctccttttctatgtgggaccactttgaagggatg
atgcactagacttttagggggctcggggtatgccctcgcccactgcagtg
caaattatggtagcacttgagagagattagtatgcaaatggagtcaccga
gcagccagatgtgctgactgtatcacaaacatgaggtctcacagtcctca
gttatccagaggacagtgcatgctcaggagctggaagcctggctgcctca
cctgttttggtccagacatggtaaggcttctccctgggcacagctgaatt
tattttgtacaccacagacccttctcggtgtttacatctctccagaatgc
tccgtctagccaccatttgccttcgcagcatgtttcttcgagctggacat
ttctagtcttgcttttttgtctcctgcaatcctcagtggcctgcctgagt
gctcttttccaagctgatatatcaacacggctcctccaactccatgtccc
taggcggaacgtatcaccactgggagagatttgaaactcaacatgtccac
cttttcggcctggtgtggcagccaatagcttct
gaattcaagactagcctaggccatatgagaccttatcggggtagggggta
catagctcagatggtagagtgccagcatcaaatgagcaaggccctgggct
ccacccctaataccacataaagctgcataccccagagctggaaagtggca
ggagagggaaaggtctcaggggctcagttatgctggatgaaaagatcctg
gacaacagccatactacaccaagcctgctaccaacatcaaagcactcacc
tagagacctcttaagacagtaatctctcatttagtgttcctgttacacaa
atgtggataacatagaaatgctaaataggagacacagaggccactggctc
atacctgtaaccatcacattcagaggctgaggcaggaggaggaccaagaa
tttgaggcttgcctgagctactagcaagttctaggccagcctggatcata
gagtggaacctttttttcaataaatatataaagaaaggaagaaaaggaga
ggcaaggagggaaggagagaaagagataaaacacctaaccagagtcagca
gtgcacacaaagttcctgagactataaacagtataatcaaaaagtggcaa
gacagggattctgcacgagtgaaacacaggctaggcaaaagcaagcccca
gatataggaacacagcactggagctcagggtatggagttcagcgcagctc
ttgaatgctgaagagttaagctgaggtcaccagagggagaaggaattggt
gaattatctcaggccaatggcattgtccattccagtgagacagcaagcac
caggtatgtggagcccaggctctcccctttctgacaccccccccccccac
ccccgcttcctgtgggctttaaggaaggcacctgggccaacatcagtggt
tagtctactcaagttcactcagtgctcttcttgctgaaatactccagcca
actgaacggccatagtgcacactacttcatgagttcctaaagacgacgca
gcctccccgagaagatagtcctctgcaccacagttacaatctgcctagtt
cataggaaggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_73254431_73255257
seq2: B6Ng01-191F24.b_47_879 (reverse)

seq1  AGAAGCT-TTGGCTTCCACA-CAGGCCG-AAAGGTGGACATGTCTGGTTT  47
      ||||||| |||||| ||||| ||||||| |||||||||||||| ||  ||
seq2  AGAAGCTATTGGCTGCCACACCAGGCCGAAAAGGTGGACATGT-TGAGTT  49

seq1  TCAAATCTCT-CCAGTGCTGATACGTTCCGCCTAGGGACATGGAGTTGGA  96
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  TCAAATCTCTCCCAGTGGTGATACGTTCCGCCTAGGGACATGGAGTTGGA  99

seq1  GGAGCCGTGTTGATATATCAGCTTGG-AAAGAGCACTCAGGCAGGCCACT  145
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGAGCCGTGTTGATATATCAGCTTGGAAAAGAGCACTCAGGCAGGCCACT  149

seq1  GAGGATTGCAGGAGAC-AAAAAGCAAGACTAGAAATGTCCAGCTCGAAGA  194
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGGATTGCAGGAGACAAAAAAGCAAGACTAGAAATGTCCAGCTCGAAGA  199

seq1  AACACTGCTGCGAAGGC-AATGGTGGCTAGACGGAGCATTCTGGAGAGAT  243
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACA-TGCTGCGAAGGCAAATGGTGGCTAGACGGAGCATTCTGGAGAGAT  248

seq1  GTAAACACCGAGAA-GGTCTGTGGTGTACAAAATAAATTCAGCTGTGCCC  292
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTAAACACCGAGAAGGGTCTGTGGTGTACAAAATAAATTCAGCTGTGCCC  298

seq1  AGGGAGAAGCCTTACCATGTCTGGACCAAAACAGGTGAGGCAGCCAGGCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAAGCCTTACCATGTCTGGACCAAAACAGGTGAGGCAGCCAGGCT  348

seq1  TCCAGCTCCTGAGCATGCACTGTCCTCTGGATAACTGAGGACTGTGAGAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTCCTGAGCATGCACTGTCCTCTGGATAACTGAGGACTGTGAGAC  398

seq1  CTCATGTTTGTGATACAGTCAGCACATCTGGCTGCTCGGTGACTCCATTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTTGTGATACAGTCAGCACATCTGGCTGCTCGGTGACTCCATTT  448

seq1  GCATACTAATCTCTCTCAAGTGCTACCATAATTTGCACTGCAGTGGGCGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTAATCTCTCTCAAGTGCTACCATAATTTGCACTGCAGTGGGCGA  498

seq1  GGGCATACCCCGAGCCCCCTAAAAGTCTAGTGCATCATCCCTTCAAAGTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATACCCCGAGCCCCCTAAAAGTCTAGTGCATCATCCCTTCAAAGTG  548

seq1  GTCCCACATAGAAAAGGAGAGATAAAACCCAAAACAAACAGCCTCCCCAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACATAGAAAAGGAGAGATAAAACCCAAAACAAACAGCCTCCCCAA  598

seq1  AAGGCATTACTTGGTTTTGTTTTTGTTATTAATATTTTACATCCTTCTAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTACTTGGTTTTGTTTTTGTTATTAATATTTTACATCCTTCTAG  648

seq1  GAAGAATTCACGCTTATAATAGCCATAGAGGGTAGAGCACAGGCTTTTAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTCACGCTTATAATAGCCATAGAGGGTAGAGCACAGGCTTTTAG  698

seq1  AAAGTGAGAGACTTTGGAGAGAGAGAGAAACATAGAAGGCAGGAACAGGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGAGACTTTGGAGAGAGAGAGAAACATAGAAGGCAGGAACAGGT  748

seq1  CAAGCCTAGAGCAGTTGCTACCTTGGTGTGTGCTATGGATCCTCCGGCAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTAGAGCAGTTGCTACCTTGGTGTGTGCTATGGATCCTCCGGCAC  798

seq1  TTGCACTGGGGTGTTTTCAATCTAGACCAGAATTC  827
      |||||||||||||||||||||||||||||||||||
seq2  TTGCACTGGGGTGTTTTCAATCTAGACCAGAATTC  833

seq1: chr17_73156328_73157393
seq2: B6Ng01-191F24.g_62_1125

seq1  GAATTCAAGACTAGCCTAGGCCATATGAGACCTTATCGGGGTAGGGGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACTAGCCTAGGCCATATGAGACCTTATCGGGGTAGGGGGTA  50

seq1  CATAGCTCAGATGGTAGAGTGCCAGCATCAAATGAGCAAGGCCCTGGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTCAGATGGTAGAGTGCCAGCATCAAATGAGCAAGGCCCTGGGCT  100

seq1  CCACCCCTAATACCACATAAAGCTGCATACCCCAGAGCTGGAAAGTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTAATACCACATAAAGCTGCATACCCCAGAGCTGGAAAGTGGCA  150

seq1  GGAGAGGGAAAGGTCTCAGGGGCTCAGTTATGCTGGATGAAAAGATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGAAAGGTCTCAGGGGCTCAGTTATGCTGGATGAAAAGATCCTG  200

seq1  GACAACAGCCATACTACACCAAGCCTGCTACCAACATCAAAGCACTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAGCCATACTACACCAAGCCTGCTACCAACATCAAAGCACTCACC  250

seq1  TAGAGACCTCTTAAGACAGTAATCTCTCATTTAGTGTTCCTGTTACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACCTCTTAAGACAGTAATCTCTCATTTAGTGTTCCTGTTACACAA  300

seq1  ATGTGGATAACATAGAAATGCTAAATAGGAGACACAGAGGCCACTGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATAACATAGAAATGCTAAATAGGAGACACAGAGGCCACTGGCTC  350

seq1  ATACCTGTAACCATCACATTCAGAGGCTGAGGCAGGAGGAGGACCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGTAACCATCACATTCAGAGGCTGAGGCAGGAGGAGGACCAAGAA  400

seq1  TTTGAGGCTTGCCTGAGCTACTAGCAAGTTCTAGGCCAGCCTGGATCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCTTGCCTGAGCTACTAGCAAGTTCTAGGCCAGCCTGGATCATA  450

seq1  GAGTGGAACCTTTTTTTCAATAAATATATAAAGAAAGGAAGAAAAGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAACCTTTTTTTCAATAAATATATAAAGAAAGGAAGAAAAGGAGA  500

seq1  GGCAAGGAGGGAAGGAGAGAAAGAGATAAAACACCTAACCAGAGTCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGAGGGAAGGAGAGAAAGAGATAAAACACCTAACCAGAGTCAGCA  550

seq1  GTGCACACAAAGTTCCTGAGACTATAAACAGTATAATCAAAAAGTGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACAAAGTTCCTGAGACTATAAACAGTATAATCAAAAAGTGGCAA  600

seq1  GACAGGGATTCTGCACGAGTGAAACACAGGCTAGGCAAAAGCAAGCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGATTCTGCACGAGTGAAACACAGGCTAGGCAAAAGCAAGCCCCA  650

seq1  GATATAGGAACACAGCACTGGAGCTCAGGGTATGGAGTTCAGCGCAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGGAACACAGCACTGGAGCTCAGGGTATGGAGTTCAGCGCAGCTC  700

seq1  TTGAATGCTGAAGAGTTAAGCTGAGGTCACCAGAGGGAGAAGGAATTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGCTGAAGAGTTAAGCTGAGGTCACCAGAGGGAGAAGGAATTGGT  750

seq1  GAATTATCTCAGGCCAATGGCATTGTCCATTCCAGTGAGACAGCAAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCTCAGGCCAATGGCATTGTCCATTCCAGTGAGACAGCAAGCAC  800

seq1  CAGGTATGTGGAGCCCAGGCTCTCCCCTTTCTGACA-CCCCCCCCCCCAC  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGGTATGTGGAGCCCAGGCTCTCCCCTTTCTGACACCCCCCCCCCCCAC  850

seq1  CCCCGCTTCCTGTGGGCTTTAAGGAAGGCACCT-GGCCAACATCAGTGGT  898
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCCGCTTCCTGTGGGCTTTAAGGAAGGCACCTGGGCCAACATCAGTGGT  900

seq1  TAGTCTACTCAAGTTCACTCAGTGCTCT--CTGCTGAAATACTCCAGCCC  946
      ||||||||||||||||||||||||||||   |||||||||||||||||| 
seq2  TAGTCTACTCAAGTTCACTCAGTGCTCTTCTTGCTGAAATACTCCAGCCA  950

seq1  ACTGAACGGCCATAGTGCACACTACTTCATGAAGTTTCCTAAAGACGACG  996
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  ACTGAACGGCCATAGTGCACACTACTTCATGA--GTTCCTAAAGACGACG  998

seq1  CAGCCTCCCCGAGAGAATAGTCCTCTGCACCAACAGTTACCATCTGGCCT  1046
      ||||||||||||||  ||||||||||||||| |||||||| |||| ||||
seq2  CAGCCTCCCCGAGAAGATAGTCCTCTGCACC-ACAGTTACAATCT-GCCT  1046

seq1  AGTTCATTAGGAAGAGAGAG  1066
      |||||| ||||||| |||||
seq2  AGTTCA-TAGGAAG-GAGAG  1064