BAC Information

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BAC

Clone NameB6Ng01-192D22
Chromosome17 (Build37)
Map Location 37,112,033 - 37,271,820
singlet/doubletdoublet
Overlap gene2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973
Upstream genePrr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps
Downstream geneOlfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192D22.bB6Ng01-192D22.g
ACCGA015532GA015533
length1,0501,093
definitionB6Ng01-192D22.b B6Ng01-192D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,112,033 - 37,113,073)(37,270,727 - 37,271,820)
sequence
gaattcatgatcatccgcaactacatacatagtgagagtttggtgcccac
ggggataaaacaatacaatacaaaacaaagcacaaagggggaacccaaga
tgtcctaccaacaggacagctagtatggcagtggagctgagggatggtga
gggtaagatgaaggagatccaggtagatactgtacaccaggtaggtggga
tccaaactgggtaggatgggggctgtgggatatttgtcccaaagaaagaa
ctttcaatcttcatgcctcagcctcctgggtgctagtcttacagacattt
gtcaccaggtctgaatctcattgaacgtatcaaaggggaatctggaccgt
gggaaataaatgtttgagagcgacctgtagcatgtcccatgtgaataaag
catatttgtttgtactgctacagcaaaataccacggactggttagctcac
accgatcacaagtttatttctcatagtcaagatgatggctaattcagtat
ctggtgagtgctcacttattaatgcatggatattgtgtctttgctaagtt
ctgagcatgtcagacatgggagacaagccccctgggctctctgttgtgag
aggaccaatcccattcataaagtttccaccatcctgttctcatcatttcc
aaagtctttaacctcaaataccatcacatccaggattaggtttcaaatgt
gaactttgggacatgaccggtctagcagggatgaggatagtctaaagtca
atgtgtccttcctttggaacatatggctgtgaattaaagcacctccagga
tttgcagtcatcccaggaatctcacgctgagagacagacactgaaacctt
gtgtcagccagaggaggaactcgtctccagaaaagaaatttcaatattac
tttctaatgattgtattggccaactttgggatgtgaagacaaccagaacc
agacaatggtgggttgatgatgaagcctagatcaccacctttatcacaca
atttgttacaacctaacctctgcatgtctcttgtcttctgttaaacattg

gaattccaggacagccagagatgtcctgaggttcaattgggacacaaaat
gcaaattgatgttcttcctcttagctctcatagtcatctgacctttcatg
actctgatggatatgtaccacccaaattaattatgcccttcctgagtgag
tccttgggggaaatgctgagtacaaacccaggaattccataaaatactta
aagttgaaacgtcttctttttcaactcccttgactgtttgttttccatat
cagtgctttcctcatgacactggctcacaactacatcaacactgtgaaag
atttcctaggagatctgctccagaatcaaggacattcttgaagtataaga
ttagtattgatattcagggcttgattcaaagacaaaagtaaggctctttc
taaaaacaatgagtcttacagtgaaagtaatttttactaaatctcaagaa
cagttttttcaacaacaacaaaaaaaaagccttgaaaaatatagtttgta
aatatgattaaaataaacgtagtaagagaatgcaattgtatttcttttat
atttgttctatggaaggaaacatctcacttttagcaaatgaaagacagaa
gtagtttattacttgaatcaggcatcaaaaaatagtatgtatctaatgct
cgaagggacagatttatgtgtagcatggcattttcccataaagtgcatgt
gtcgggccgtgataggtagtctattttggctgaatgaggcttgctccagc
aacccagtagaaaactccatgggacagaaaagctagccatgttcccagag
tcagctgcctgacaccacagagcccccaactccataattctgtgactata
agtcacaatgtcccaagcttctggcattctggctagtctccatccccaca
gttaccagactagagccaggtatacctcctccccacagttacctgaatag
cccagaccacttataaaaggacctgttcggtctctcactctctctcaaag
ctcctccacttttctactctcatctctagccctcttctctctctccgttc
cccccctctccaaccttggtcatgcgcctcctctcttttctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37112033_37113073
seq2: B6Ng01-192D22.b_45_1094

seq1  GAATTCATGATCATCCGCAACTACATACATAGTGAGAGTTTGGTGCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATCATCCGCAACTACATACATAGTGAGAGTTTGGTGCCCAC  50

seq1  GGGGATAAAACAATACAATACAAAACAAAGCACAAAGGGGGAACCCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAAAACAATACAATACAAAACAAAGCACAAAGGGGGAACCCAAGA  100

seq1  TGTCCTACCAACAGGACAGCTAGTATGGCAGTGGAGCTGAGGGATGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTACCAACAGGACAGCTAGTATGGCAGTGGAGCTGAGGGATGGTGA  150

seq1  GGGTAAGATGAAGGAGATCCAGGTAGATACTGTACACCAGGTAGGTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGATGAAGGAGATCCAGGTAGATACTGTACACCAGGTAGGTGGGA  200

seq1  TCCAAACTGGGTAGGATGGGGGCTGTGGGATATTTGTCCCAAAGAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTGGGTAGGATGGGGGCTGTGGGATATTTGTCCCAAAGAAAGAA  250

seq1  CTTTCAATCTTCATGCCTCAGCCTCCTGGGTGCTAGTCTTACAGACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATCTTCATGCCTCAGCCTCCTGGGTGCTAGTCTTACAGACATTT  300

seq1  GTCACCAGGTCTGAATCTCATTGAACGTATCAAAGGGGAATCTGGACCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAGGTCTGAATCTCATTGAACGTATCAAAGGGGAATCTGGACCGT  350

seq1  GGGAAATAAATGTTTGAGAGCGACCTGTAGCATGTCCCATGTGAATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATAAATGTTTGAGAGCGACCTGTAGCATGTCCCATGTGAATAAAG  400

seq1  CATATTTGTTTGTACTGCTACAGCAAAATACCACGGACTGGTTAGCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGTTTGTACTGCTACAGCAAAATACCACGGACTGGTTAGCTCAC  450

seq1  ACCGATCACAAGTTTATTTCTCATAGTCAAGATGATGGCTAATTCAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGATCACAAGTTTATTTCTCATAGTCAAGATGATGGCTAATTCAGTAT  500

seq1  CTGGTGAGTGCTCACTTATTAATGCATGGATATTGTGTCTTTGCTAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAGTGCTCACTTATTAATGCATGGATATTGTGTCTTTGCTAAGTT  550

seq1  CTGAGCATGTCAGACATGGGAGACAAGCCCCCTGGGCTCTCTGTTGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCATGTCAGACATGGGAGACAAGCCCCCTGGGCTCTCTGTTGTGAG  600

seq1  AGGACCAATCCCATTCATAAAG-TTCCACCATCCTGTTCTCATCATTTCC  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGACCAATCCCATTCATAAAGTTTCCACCATCCTGTTCTCATCATTTCC  650

seq1  AAAGTCTTTAACCTCAAATACCATCACATCCAGGATTAGGTTTCAAATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTTAACCTCAAATACCATCACATCCAGGATTAGGTTTCAAATGT  700

seq1  GAACTTTGGGACATGACCGGTCTAGCAGGGATGAGGATAGTCTAAAGTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTGGGACATGACCGGTCTAGCAGGGATGAGGATAGTCTAAAGTCA  750

seq1  ATGTGTCCTTCCTTTGGAACATATGGCTGTGAATTAAGGCACCTCCAGGA  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGTGTCCTTCCTTTGGAACATATGGCTGTGAATTAAAGCACCTCCAGGA  800

seq1  TTTGCAGTCATCCCAGGAATCTCACGCTGAGAGACAGACACTGAAACCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGCAGTCATCCCAGGAATCTCACGCTGAGAGACAGACACTGAAACCTT  850

seq1  GTGTCAGCCAGAGGAGGAACTCGTCTCCAGAAAAGAAATTTC-ATA-TAC  897
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  GTGTCAGCCAGAGGAGGAACTCGTCTCCAGAAAAGAAATTTCAATATTAC  900

seq1  -TTCTAATGA-TGTATTGGGCCAAC-TTGGGATGTG-AGACAA-CAG-AC  941
       ||||||||| |||||| ||||||| |||||||||| |||||| ||| ||
seq2  TTTCTAATGATTGTATT-GGCCAACTTTGGGATGTGAAGACAACCAGAAC  949

seq1  CAGACAATGGTGGGTTGATGATGAAG-CTAGATCA-CACCTTGGTCACAC  989
      |||||||||||||||||||||||||| |||||||| ||||||  ||||||
seq2  CAGACAATGGTGGGTTGATGATGAAGCCTAGATCACCACCTTTATCACAC  999

seq1  AATTGTGTCACAGCCTAA-CTCTGCATGTCTCTTGTCTTCTGTTTAAACA  1038
      |||| ||| ||| ||||| ||||||||||||||||||||||| |||||||
seq2  AATT-TGTTACAACCTAACCTCTGCATGTCTCTTGTCTTCTG-TTAAACA  1047

seq1  TTG  1041
      |||
seq2  TTG  1050

seq1: chr17_37270727_37271820
seq2: B6Ng01-192D22.g_69_1161 (reverse)

seq1  GTAGAAAGAGAGAGAGGCCGGCCATGACCA--GGTGGAGAGGGGGGAAAG  48
      |||||||   |||||||  |  ||||||||  | |||||||||||| || 
seq2  GTAGAAA---AGAGAGGAGGCGCATGACCAAGGTTGGAGAGGGGGGGAAC  47

seq1  GGAGAGAGAGAAGGAGGGCTAGAGATGAGAGTAAGAAAAGTG--AGAGCT  96
      |||||||||||| ||||||||||||||||||| |||||||||   |||||
seq2  GGAGAGAGAGAA-GAGGGCTAGAGATGAGAGT-AGAAAAGTGGAGGAGCT  95

seq1  TTGAGAGAGAGTGAGGAGGGGCCGAACAGGTCCTTTTAT-AGTGGTCTGG  145
      ||||||||||||   ||| | |||||||||||||||||| ||||||||||
seq2  TTGAGAGAGAGT---GAGAGACCGAACAGGTCCTTTTATAAGTGGTCTGG  142

seq1  GCTA-TCAGGTAACTGTGGGGAGGA-GTATACCTGGCTCTAGTCTGGTAA  193
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTATTCAGGTAACTGTGGGGAGGAGGTATACCTGGCTCTAGTCTGGTAA  192

seq1  CTGTGGGGATGGAGACTAGCCAGAATGCCAGAAGCTTGGGACATTGTGAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGGATGGAGACTAGCCAGAATGCCAGAAGCTTGGGACATTGTGAC  242

seq1  TTATAGTCACAGAATTATGGAGTTGGGGGCTCTGTGGTGTCAGGCAGCTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCACAGAATTATGGAGTTGGGGGCTCTGTGGTGTCAGGCAGCTG  292

seq1  ACTCTGGGAACATGGCTAGCTTTTCTGTCCCATGGAGTTTTCTACTGGGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGGAACATGGCTAGCTTTTCTGTCCCATGGAGTTTTCTACTGGGT  342

seq1  TGCTGGAGCAAGCCTCATTCAGCCAAAATAGACTACCTATCACGGCCCGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGCAAGCCTCATTCAGCCAAAATAGACTACCTATCACGGCCCGA  392

seq1  CACATGCACTTTATGGGAAAATGCCATGCTACACATAAATCTGTCCCTTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCACTTTATGGGAAAATGCCATGCTACACATAAATCTGTCCCTTC  442

seq1  GAGCATTAGATACATACTATTTTTTGATGCCTGATTCAAGTAATAAACTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTAGATACATACTATTTTTTGATGCCTGATTCAAGTAATAAACTA  492

seq1  CTTCTGTCTTTCATTTGCTAAAAGTGAGATGTTTCCTTCCATAGAACAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCTTTCATTTGCTAAAAGTGAGATGTTTCCTTCCATAGAACAAA  542

seq1  TATAAAAGAAATACAATTGCATTCTCTTACTACGTTTATTTTAATCATAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAAATACAATTGCATTCTCTTACTACGTTTATTTTAATCATAT  592

seq1  TTACAAACTATATTTTTCAAGGCTTTTTTTTTGTTGTTGTTGAAAAAACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACTATATTTTTCAAGGCTTTTTTTTTGTTGTTGTTGAAAAAACT  642

seq1  GTTCTTGAGATTTAGTAAAAATTACTTTCACTGTAAGACTCATTGTTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGAGATTTAGTAAAAATTACTTTCACTGTAAGACTCATTGTTTTT  692

seq1  AGAAAGAGCCTTACTTTTGTCTTTGAATCAAGCCCTGAATATCAATACTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGCCTTACTTTTGTCTTTGAATCAAGCCCTGAATATCAATACTA  742

seq1  ATCTTATACTTCAAGAATGTCCTTGATTCTGGAGCAGATCTCCTAGGAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATACTTCAAGAATGTCCTTGATTCTGGAGCAGATCTCCTAGGAAA  792

seq1  TCTTTCACAGTGTTGATGTAGTTGTGAGCCAGTGTCATGAGGAAAGCACT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACAGTGTTGATGTAGTTGTGAGCCAGTGTCATGAGGAAAGCACT  842

seq1  GATATGGAAAACAAACAGTCAAGGGAGTTGAAAAAGAAGACGTTTCAACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGAAAACAAACAGTCAAGGGAGTTGAAAAAGAAGACGTTTCAACT  892

seq1  TTAAGTATTTTATGGAATTCCTGGGTTTGTACTCAGCATTTCCCCCAAGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATTTTATGGAATTCCTGGGTTTGTACTCAGCATTTCCCCCAAGG  942

seq1  ACTCACTCAGGAAGGGCATAATTAATTTGGGTGGTACATATCCATCAGAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCAGGAAGGGCATAATTAATTTGGGTGGTACATATCCATCAGAG  992

seq1  TCATGAAAGGTCAGATGACTATGAGAGCTAAGAGGAAGAACATCAATTTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAAGGTCAGATGACTATGAGAGCTAAGAGGAAGAACATCAATTTG  1042

seq1  CATTTTGTGTCCCAATTGAACCTCAGGACATCTCTGGCTGTCCTGGAATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTGTCCCAATTGAACCTCAGGACATCTCTGGCTGTCCTGGAATT  1092

seq1  C  1094
      |
seq2  C  1093