BAC Information

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BAC

Clone NameB6Ng01-193D24
Chromosome17 (Build37)
Map Location 69,530,948 - 69,669,322
singlet/doubletdoublet
Overlap geneEpb4.1l3, 2410021H03Rik
Upstream geneD930040M24Rik, EG622645
Downstream geneZfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193D24.bB6Ng01-193D24.g
ACCGA016275GA016276
length6491,182
definitionB6Ng01-193D24.b B6Ng01-193D24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,668,674 - 69,669,322)(69,530,948 - 69,532,123)
sequence
gaattcaaaaagatcacctgcttctacatctcaagtgccaggattgatgg
ccatggcaccacagcaggccaaagattttcatctcaggagacaaggcgat
ctgggaatgacagagggattttctgctgtgtggagatgggggtggatgat
aacctcgaaagaccttgcagtgagcaaactcgagaagaagatagaaatag
tggaaatgtatatcagacaccagaatagaaaatgcagtgttgaaagggaa
tttaaaatgtattcattctgtctcttagatataaatacagaaattggtgc
ctttacaggctatcacccgtccagcatctcaggtctcatggaggaaccag
gcaatcgccaaggtgaagaaagcctctgtgtaccgtgtcccacacgaatg
ctttggctactccttttttgtttgtttgttttgttttgttttcgagacag
ggtttctctgtgaagtcctggaactcactctgtagaccaggctggcctcg
aactcagaaatccgcgtgcctctgcctcccaagtgctgggattaaaggcg
tgcgctaccacacccggctgtctactccttcttccttacccttcaatata
ggccacagataaggaaatttaaggtccagggaggaagggtgatttgttg

gaattcacattttctatccaggctgaatcccaagcagtgtgatttcagcg
accgaccgaggatttttgtagggagagctgtaaagcagagacctctctga
gacaccctgcagtgtccatggctgcagctggcgggtctaattatagtgtg
ggaagccccttaggaatttcagaaagtgttagcaaaaggcccgaagcaaa
tggcagctgtttgccttgggcaccagggagccaaagtccatgtataataa
aaatagcatgccctagccagcctttgctggcctcagacacttacagaatc
actctccttatggctagtaattaataatagactgatggccagttatcaaa
agggttggctccagagatctgggagcaggggggacacatattcatctttc
atagtttaatactgaaagcattggcttccccaggacacattaacttaaag
gtagccaagcaaataaatattgcacaaggttgtttggaatatcaggatat
tacgggtgcagctgtaccctgcctggcctcatgatgataacatgaaggaa
accccaccttctaacatacgatgtgagaagtagtctgtaatggttttttg
tttgtttgtttgtttattttgaaataaagactcaaacacaaggactacca
gcaaagtgacaatgattcattcccatgaggaactacatgcccaagtcttc
acagagttgtgtgtcattttagaaaaccatgctacttccagctaggctct
tggacaagcaaccgccccgcctgccagctaaggtttttcccacaaatgct
gagagcgtcatcccggctatgcttcaagaaaggccgctgccacgctgcct
gctgatgtttttcctccagcagccacccatacttgctccttcttgtgagc
ttcagccccgcccgagcttcttttcaatctctgggtgggctagttccacc
aaggccgccaatagaccacccttgtctggtcttgctcagctcctggtcaa
ggctagttggagaattatactgggccatccctcttgggctcgcagttgcc
tgccaagcttaacgaactaatggatggcccaaagacttcatgtcttgcag
ctcttatcctctctggcacttggcttcgctaatcctctcatcctttccta
tcctgcctggaaactctctcataatctctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69668674_69669322
seq2: B6Ng01-193D24.b_47_695 (reverse)

seq1  CAACAAATCACCCTTCCTCCCTGGACCTTAAATTTCCTTATCTGTGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATCACCCTTCCTCCCTGGACCTTAAATTTCCTTATCTGTGGCCT  50

seq1  ATATTGAAGGGTAAGGAAGAAGGAGTAGACAGCCGGGTGTGGTAGCGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAAGGGTAAGGAAGAAGGAGTAGACAGCCGGGTGTGGTAGCGCAC  100

seq1  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCACGCGGATTTCTGAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCACGCGGATTTCTGAGTTC  150

seq1  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACTTCACAGAGAAACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACTTCACAGAGAAACCC  200

seq1  TGTCTCGAAAACAAAACAAAACAAACAAACAAAAAAGGAGTAGCCAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGAAAACAAAACAAAACAAACAAACAAAAAAGGAGTAGCCAAAGC  250

seq1  ATTCGTGTGGGACACGGTACACAGAGGCTTTCTTCACCTTGGCGATTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTGTGGGACACGGTACACAGAGGCTTTCTTCACCTTGGCGATTGCC  300

seq1  TGGTTCCTCCATGAGACCTGAGATGCTGGACGGGTGATAGCCTGTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTCCATGAGACCTGAGATGCTGGACGGGTGATAGCCTGTAAAGG  350

seq1  CACCAATTTCTGTATTTATATCTAAGAGACAGAATGAATACATTTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATTTCTGTATTTATATCTAAGAGACAGAATGAATACATTTTAAAT  400

seq1  TCCCTTTCAACACTGCATTTTCTATTCTGGTGTCTGATATACATTTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCAACACTGCATTTTCTATTCTGGTGTCTGATATACATTTCCAC  450

seq1  TATTTCTATCTTCTTCTCGAGTTTGCTCACTGCAAGGTCTTTCGAGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTATCTTCTTCTCGAGTTTGCTCACTGCAAGGTCTTTCGAGGTTA  500

seq1  TCATCCACCCCCATCTCCACACAGCAGAAAATCCCTCTGTCATTCCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCACCCCCATCTCCACACAGCAGAAAATCCCTCTGTCATTCCCAGA  550

seq1  TCGCCTTGTCTCCTGAGATGAAAATCTTTGGCCTGCTGTGGTGCCATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTTGTCTCCTGAGATGAAAATCTTTGGCCTGCTGTGGTGCCATGGC  600

seq1  CATCAATCCTGGCACTTGAGATGTAGAAGCAGGTGATCTTTTTGAATTC  649
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATCCTGGCACTTGAGATGTAGAAGCAGGTGATCTTTTTGAATTC  649


seq1: chr17_69530948_69532123
seq2: B6Ng01-193D24.g_64_1245

seq1  GAATTCACATTTTCTATCCAGGCTGAATCCCAAGCAGTGTGATTTCAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTTCTATCCAGGCTGAATCCCAAGCAGTGTGATTTCAGCG  50

seq1  ACCGACCGAGGATTTTTGTAGGGAGAGCTGTAAAGCAGAGACCTCTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACCGAGGATTTTTGTAGGGAGAGCTGTAAAGCAGAGACCTCTCTGA  100

seq1  GACACCCTGCAGTGTCCATGGCTGCAGCTGGCGGGTCTAATTATAGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTGCAGTGTCCATGGCTGCAGCTGGCGGGTCTAATTATAGTGTG  150

seq1  GGAAGCCCCTTAGGAATTTCAGAAAGTGTTAGCAAAAGGCCCGAAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCCTTAGGAATTTCAGAAAGTGTTAGCAAAAGGCCCGAAGCAAA  200

seq1  TGGCAGCTGTTTGCCTTGGGCACCAGGGAGCCAAAGTCCATGTATAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTGTTTGCCTTGGGCACCAGGGAGCCAAAGTCCATGTATAATAA  250

seq1  AAATAGCATGCCCTAGCCAGCCTTTGCTGGCCTCAGACACTTACAGAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCATGCCCTAGCCAGCCTTTGCTGGCCTCAGACACTTACAGAATC  300

seq1  ACTCTCCTTATGGCTAGTAATTAATAATAGACTGATGGCCAGTTATCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCTTATGGCTAGTAATTAATAATAGACTGATGGCCAGTTATCAAA  350

seq1  AGGGTTGGCTCCAGAGATCTGGGAGCAGGGGGGACACATATTCATCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGCTCCAGAGATCTGGGAGCAGGGGGGACACATATTCATCTTTC  400

seq1  ATAGTTTAATACTGAAAGCATTGGCTTCCCCAGGACACATTAACTTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTAATACTGAAAGCATTGGCTTCCCCAGGACACATTAACTTAAAG  450

seq1  GTAGCCAAGCAAATAAATATTGCACAAGGTTGTTTGGAATATCAGGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAAGCAAATAAATATTGCACAAGGTTGTTTGGAATATCAGGATAT  500

seq1  TACGGGTGCAGCTGTACCCTGCCTGGCCTCATGATGATAACATGAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGTGCAGCTGTACCCTGCCTGGCCTCATGATGATAACATGAAGGAA  550

seq1  ACCCCACCTTCTAACATACGATGTGAGAAGTAGTCTGTAATGGTTTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCTTCTAACATACGATGTGAGAAGTAGTCTGTAATGGTTTTTTG  600

seq1  TTTGTTTGTTTGTTTATTTTGAAATAAAGACTCAAACACAAGGACTACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTATTTTGAAATAAAGACTCAAACACAAGGACTACCA  650

seq1  GCAAAGTGACAATGATTCATTCCCATGAGGAACTACATGCCCAAGTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTGACAATGATTCATTCCCATGAGGAACTACATGCCCAAGTCTTC  700

seq1  ACAGAGTTGTGTGTCATTTTAGAAAACCATGCTACTTCCAGCTAGGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTGTGTGTCATTTTAGAAAACCATGCTACTTCCAGCTAGGCTCT  750

seq1  TGGACAAGCAACCGCCCCGCCTGCCAGCTAAGGTTTTTCCCACAAATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAGCAACCGCCCCGCCTGCCAGCTAAGGTTTTTCCCACAAATGCT  800

seq1  GAGAGCGTCATCCCGGCTATGCTTCAAGAAAGGCCGCTGCCACGCTGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCGTCATCCCGGCTATGCTTCAAGAAAGGCCGCTGCCACGCTGCCT  850

seq1  GCTGATG-TTTTCCTCCAGCAGCCACCCATACTTGCTCCTTCTTGTGAGC  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGTTTTTCCTCCAGCAGCCACCCATACTTGCTCCTTCTTGTGAGC  900

seq1  -TCAGCCCCGCCCGAGCT--CTTTCAATCTCTGG--TGGCTAGTTCCACC  944
       |||||||||||||||||   |||||||||||||   |||||||||||||
seq2  TTCAGCCCCGCCCGAGCTTCTTTTCAATCTCTGGGTGGGCTAGTTCCACC  950

seq1  AA-GCCGCCAATAGACCACCC-TGTCTGGTCTTGCTCAGCTCCTGGTCAA  992
      || |||||||||||||||||| |||||||||||||||||||||||||| |
seq2  AAGGCCGCCAATAGACCACCCTTGTCTGGTCTTGCTCAGCTCCTGGTC-A  999

seq1  AGGCTAGGTGGAGAA-TATACTGGCCCATCCTCCTTGGCCTCCGCAGTTG  1041
      ||||||| ||||||| |||||||| ||||||  ||||| || ||||||||
seq2  AGGCTAGTTGGAGAATTATACTGGGCCATCCCTCTTGGGCT-CGCAGTTG  1048

seq1  CCTGCCCAGGCT-ACAGACT-ATTGATGCCCCAAGAGACTTTCATGTC-T  1088
      |||||| ||  | ||  ||| || |||| ||||| |||| |||||||| |
seq2  CCTGCCAAGCTTAACGAACTAATGGATGGCCCAA-AGAC-TTCATGTCTT  1096

seq1  GCAGCTTCTTATCCTCTCT-GCACCTGGTCTTCGTCTAATCCTCTCCATC  1137
      ||||| ||||||||||||| |||| ||| ||||| |||||||||| ||||
seq2  GCAGC-TCTTATCCTCTCTGGCACTTGG-CTTCG-CTAATCCTCT-CATC  1142

seq1  CCCCTCTTCCTATCCTGCCTGGAAA-TCTC-CATA---TCTTTG  1176
      |     ||||||||||||||||||| |||| ||||   ||||||
seq2  C----TTTCCTATCCTGCCTGGAAACTCTCTCATAATCTCTTTG  1182


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