BAC Information

Click to search

BAC

Clone NameB6Ng01-194G23
Chromosome17 (Build37)
Map Location 50,279,922 - 50,280,632
singlet/doubletsinglet
Overlap geneRftn1
Upstream geneLOC672972, Mocs1, Daam2, Kif6, EG668470
Downstream geneEG668475, EG628747, LOC100043818, Dazl, Plcl2, EG654432, Tbc1d5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194G23.bB6Ng01-194G23.g
ACCGA017130GA017131
length712447
definitionB6Ng01-194G23.b B6Ng01-194G23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcttcggttcctgccttagcttctatcaaatatagacacgaca
aagctgaaacaaacctctccaagacatctgtggttaatggtttatcacag
agaccaaactaaaataatgtagcatgaagctgttctaagttaaaatacac
tcaagcaagcaaaaagtgctttgccaagtttcatgtatacccacttgcag
aattaaaatgtgaagttggggctggaggcatggcccagccgttaggacca
catgatgctcatgcagagaatctggagttagtacccagctcactcatggt
ggctcataaccacctgtcccagttccagagcatctgacactctctgaact
ccacaggcaccaggcatgcacatggtacatatacatacatgcaggcaaaa
cactcaaacacatacaataaaaataaaaaaaaaataagtaagggattttt
aaaatgtaatggaccttgttttctaaaggtgttctcaaaagtttctcaat
aaagcaaattacattaatgtacatatctttcttctcggaacaagcgacaa
tcaacaattgacttctgatcaaaagttcattttaaaatacgtcacaaaga
cacatagtaacctgttattgcaaatcagatctaaaaatgcctatactgca
agtctgttgggtgtttgttgttgttgtttggttttgcttgtttgttcaac
aagaattgaagc

aaaggattgtttatttaagagagaggggggagagggagtgggagagagag
atctcatattatcgatttaacagcacatttgaaagttatagaacaacaag
aagaaaccacacccaaaggaatagatgggaagaaataatcaaacacatgg
ctgctgaaattggtaaaatggaaacagagaatgatataaaaaatcaatga
aataaaaagttggctctttgagacaatcaaagaaaaaattctgattagtt
ttgaagtctattttgttagatattaaaaatggcaagccaggttgattctt
aggtccatttgcttgggatatctttttccaaacctttaccctgaggtaac
atctatccttgatactgaggtgtcttctttgggtacagaagaaaatggat
cctgttttcacatccattcttgttggtctgtgtctcttttcggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_50279922_50280632
seq2: B6Ng01-194G23.b_47_758

seq1  GAATTCTGCTTCGGTTCCTGCCTTAGCTTCTATCAAATATAGACACGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTCGGTTCCTGCCTTAGCTTCTATCAAATATAGACACGACA  50

seq1  AAGCTGAAACAAACCTCTCCAAGACATCTGTGGTTAATGGTTTATCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAACAAACCTCTCCAAGACATCTGTGGTTAATGGTTTATCACAG  100

seq1  AGACCAAACTAAAATAATGTAGCATGAAGCTGTTCTAAGTTAAAATACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAACTAAAATAATGTAGCATGAAGCTGTTCTAAGTTAAAATACAC  150

seq1  TCAAGCAAGCAAAAAGTGCTTTGCCAAGTTTCATGTATACCCACTTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAAGCAAAAAGTGCTTTGCCAAGTTTCATGTATACCCACTTGCAG  200

seq1  AATTAAAATGTGAAGTTGGGGCTGGAGGCATGGCCCAGCCGTTAGGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATGTGAAGTTGGGGCTGGAGGCATGGCCCAGCCGTTAGGACCA  250

seq1  CATGATGCTCATGCAGAGAATCTGGAGTTAGTACCCAGCTCACTCATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGCTCATGCAGAGAATCTGGAGTTAGTACCCAGCTCACTCATGGT  300

seq1  GGCTCATAACCACCTGTCCCAGTTCCAGAGCATCTGACACTCTCTGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATAACCACCTGTCCCAGTTCCAGAGCATCTGACACTCTCTGAACT  350

seq1  CCACAGGCACCAGGCATGCACATGGTACATATACATACATGCAGGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGCACCAGGCATGCACATGGTACATATACATACATGCAGGCAAAA  400

seq1  CACTCAAACACATACAATAAAAATAAAAAAAAAATAAGTAAGGGATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAACACATACAATAAAAATAAAAAAAAAATAAGTAAGGGATTTTT  450

seq1  AAAATGTAATGGACCTTGTTTTCTAAAGGTGTTCTCAAAAGTTTCTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAATGGACCTTGTTTTCTAAAGGTGTTCTCAAAAGTTTCTCAAT  500

seq1  AAAGCAAATTACATTAATGTACATATCTTTCTTCTCGGAACAAGCGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAATTACATTAATGTACATATCTTTCTTCTCGGAACAAGCGACAA  550

seq1  TCAACAATTGACTTCTGATCAAAAGTTCATTTT-AAATACGTCACAAAGA  599
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCAACAATTGACTTCTGATCAAAAGTTCATTTTAAAATACGTCACAAAGA  600

seq1  CACATAGTAACCTGTTATTGCAAATCAGATCTAAAAATGCCTATACTGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGTAACCTGTTATTGCAAATCAGATCTAAAAATGCCTATACTGCA  650

seq1  AGTCTGTTGGGTGTTTGTTGTTGTTGTTTGGTTTTGTTTGTTTGTTTAAC  699
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  AGTCTGTTGGGTGTTTGTTGTTGTTGTTTGGTTTTGCTTGTTTGTTCAAC  700

seq1  AAGAATTGAAGC  711
      ||||||||||||
seq2  AAGAATTGAAGC  712


| Home | SequenceCutter | Blast | Download |