MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-197D21
Chromosome	17 (Build37)
Map Location	52,028,045 - 52,028,482
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Tbc1d5, LOC100043451, LOC100043452, Satb1, EG628919
Downstream gene	LOC672987, EG328839
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tbc1d5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72238 MGI:1919488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043451 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC100043452 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043452
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Satb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20230 MGI:105084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628919 MGI:3648115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC672987 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG328839 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328839 MGI:3647348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:36287143 GeneID:72238 MGI:1919488
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 5 transcript_id : NM_028162.2

name	LOC100043451 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268736 GeneID:100043451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001480189.1

name	Satb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677850 GeneID:20230 MGI:105084
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : special AT-rich sequence binding protein 1 transcript_id : NM_009122.1

name	EG628919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268740 GeneID:628919 MGI:3648115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG628919 transcript_id : XM_893730.3

name	LOC672987 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268742 GeneID:672987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC672987 transcript_id : XM_001480203.1

name	EG328839 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364417 GeneID:328839 MGI:3647348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG328839 transcript_id : NM_177825.3

name	Tbc1d5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:36287144 GeneID:72238 MGI:1919488
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : TBC1 domain family, member 5 protein_id : NP_082438.2

name	LOC100043451 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268737 GeneID:100043451
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480239.1

name	Satb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677851 CCDS:CCDS28876.1 GeneID:20230 MGI:105084
definition	GO_component : GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence IDA]; GO:0016571 - histone methylation [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : special AT-rich sequence binding protein 1 protein_id : NP_033148.1

name	EG628919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268741 GeneID:628919 MGI:3648115
definition	codon_start : 1 product : similar to predicted protein protein_id : XP_898823.3

name	LOC672987 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268743 GeneID:672987
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480253.1

name	EG328839 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244392 GeneID:328839 MGI:3647348
definition	codon_start : 1 product : hypothetical protein LOC328839 protein_id : NP_808493.1

name	LOC100043452 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043452
definition	number : 2 pseudo : _no_value

name	LOC100043452 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043452
definition	number : 1 pseudo : _no_value

clone name	MSMg01-398C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-197D21.g
ACC		GA019160
length		194
definition		B6Ng01-197D21.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		taaggggtggacctctataaaaagagagccgcggattccacaccttccat ttttgtctcttttcaggctctccttcatgcacggtcatgctaattttaat atcagaatgatggtatttgttattctgttagcacagttttattaactttt cccagtgctggtctattttttcagagaactgcaacctaatctat
quality values		Open. Hide. 14 5 6 5 4 9 14 5 5 11 9 9 6 7 21 13 10 13 10 7 8 24 34 16 9 30 24 9 11 13 7 13 26 15 23 13 18 18 14 12 13 8 20 23 18 8 12 17 6 10 7 11 6 6 10 9 18 14 27 19 19 23 23 25 15 27 40 19 36 36 28 29 18 11 13 11 18 10 24 22 15 23 18 17 10 11 13 23 28 11 5 18 13 9 5 15 18 17 11 11 25 10 13 19 18 23 27 33 25 34 24 27 29 19 29 23 39 27 23 12 12 8 19 24 34 25 34 27 22 17 5 9 10 18 11 16 7 25 16 19 25 15 25 11 18 13 23 13 13 17 16 27 27 27 11 21 24 13 18 20 13 10 13 18 8 11 11 7 10 16 19 16 14 17 40 16 46 34 24 21 23 18 25 30 13 23 23 16 8 11 27 8 10 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_52028045_52028482
seq2: B6Ng01-197D21.g_35_194 (reverse)

seq1  ATAGATCTTATACTATACAGATTTTTGAACACGTGTTTTATACATAATTG  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATATATTATGGGCTTCTAGGTGATGAAGCTGTATTAGGGTGGCTGGGTAC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TCAGATATTGTAGGGAGACATGATCAGTTCCAAACTGAGAGCCCAAGTGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  CCAGGAGTAGTGGGGCAATTCATTCTTAAACTCCAAATTCTATGATCCCT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCAAGTTCCCACTATGTGTTTTAAGAAGACGGTGCTCTCAGAAAGTGT  250
                                                        
seq2  --------------------------------------------------  0

seq1  AGGTACCATATGATCACAGTAGAATGTATAGACTAGGTTGCAGTTCTCTG  300
                                 ||||| |||||||||||||||||
seq2  ---------------------------ATAGATTAGGTTGCAGTTCTCTG  23

seq1  AATACAAAGACCAGCACTGGG-AAAGTTAATAAAACTGTGCTAACAGAAT  349
      || | | |||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAAAATAGACCAGCACTGGGAAAAGTTAATAAAACTGTGCTAACAGAAT  73

seq1  AACAAATACCATCATTCTACTCCTAAGCTTCTGCATGCCCGTGCATGAAG  399
      ||||||||||||||||||  |  |||  ||  ||||| ||||||||||||
seq2  AACAAATACCATCATTCTGATATTAAAATT-AGCATGACCGTGCATGAAG  122

seq1  GAGAGCCTGAAAAGAGAGATATGTAGAAGGTGTTGGAAT  438
      ||||||||||||||||| | |  | ||||||| ||||||
seq2  GAGAGCCTGAAAAGAGACAAAAATGGAAGGTG-TGGAAT  160

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information