BAC Information

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BAC

Clone NameB6Ng01-200C17
Chromosome17 (Build37)
Map Location 41,467,895 - 41,468,586
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668229, LOC100043756, EG433107, EG619517, Crisp2, Rhag, 9130008F23Rik, EG435528, Cenpq, Mut, Ldha-ps3
Downstream geneLOC627577, LOC627626
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200C17.bB6Ng01-200C17.g
ACCGA021306GA021307
length1,196960
definitionB6Ng01-200C17.b B6Ng01-200C17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgctagtttttgtatacaattgaagttttcaacagttgtttg
ggttttttttttctactttttagataatgtttttcttctctgtgcacttc
acattctgtattttgatcatatttattctgtacctccaacttctcttata
atctaacctctaactaccttctttctctttgccttctccttctgtcctcc
ccgacagcagctctgtctctttttctctgtctgcctgtctgtctgtctgt
ctctctctgtctctctctgtctctctctgtctctctctctgtctctctct
gtctgtctctgtctctgtctgtctgtctgtctctctctctctctctctct
ctctctctctctggagtctatgttcactgactactccaggtcattgagtc
tgtgataaactatggcagatagaccaacatatgaaactgtggaaggcaac
tgattttctgtcttgtagttagattcaatgcctttagctctttagctagg
cttgggggtttctattcagctcccctcatctgtgcttggattttgtctgg
actgagcttgtgcaatcttttgcacttaaaatgagttcatatatgcttcc
tctctgttgtacctgtgtcctagttaggatttccgttgaaacaccatgat
caaaaaataagttggcaagaaaagagtttattaggcttacacttctagtt
catagtccattactggaggaagtcaggacaggaactgaagcaggcctgga
ccctggagaaaggaactggggtagaggcttcacatggatttctcagcctg
ctttcttgtagaatttaggactaccagcccagggatgtttcacccacatt
aggctgagcctgcccttgttgatcattaattaagaaaataccttgcagct
gcatctcatggagacattttctcaattgaggattgtttgctctgataact
ctagcttgagtatagtgatatataaaacatccagtgcagtctgaaaacac
tgtttcttgagtccacctacagttctggcctttagaatatttctgccctt
ctttttacaatagatcctctgagccttagcaatggggtttgacatagaaa
ttccgttagacctggacccactctaagatcctcttatattctcgcacatt
gacaagttgtggaaggcatctcatcttgcaggaccctctctcctgc

gaattcctgggaggcttgctgttttctgtagggaaatggaggagtagatc
ttgtggaaaggcactggggtaggggactgagagtgagtggagtgaagaaa
aactgcacttaggaggtaatgcttgagagaataataataataaaagaatg
gctttacaatatcttactagtgagagatttttagttcctttagtcgggtt
tttaaatttttttcttcaatcttgagaatttttttcccacccacaggtct
acaggtctacaaagcagatacacagatctgatatgtactgataataaatg
acaaagaaatatattttagaaaatttgcttgatatacataaatattatta
cttattaaagataaaaacaaatttgtcaactggcaagataaatgtgcttg
tttgttgaacacaataaaataaaaatatactgatttaatatattctgatt
aataatggtaggaaaatattaaaagttttgttcttggaaattaaaccatt
tcatttctattagagcagaaactttcatatgtacaatggaaaccactgca
gttcactgcagttcaacacacacacacacacacagacacacacacacaaa
cacatacacactaattttgagtctgagtcaaggtgtcttgtgcagttttc
attgatactatttgacatcacattgtagggtttatagaatgtgagtgatg
tgtgctcagaatcaaatttgccatgaggtcctatgatacaacataagcta
gtgttgttataatcacttcatatttggtacatatttggctttgaattaag
tttttgttccttgtatacagaaatcttttatttcaaaggatgctacatcc
actccaatagtgacaaggctacaggccccagaaccctgggtgctgtcctg
aggcgaaaagttcactgaaacttagtctcctggaaccatgggcatcctgt
ataaagaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_41467895_41468586
seq2: B6Ng01-200C17.g_66_757

seq1  GAATTCCTGGGAGGCTTGCTGTTTTCTGTAGGGAAATGGAGGAGTAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGAGGCTTGCTGTTTTCTGTAGGGAAATGGAGGAGTAGATC  50

seq1  TTGTGGAAAGGCACTGGGGTAGGGGACTGAGAGTGAGTGGAGTGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAAAGGCACTGGGGTAGGGGACTGAGAGTGAGTGGAGTGAAGAAA  100

seq1  AACTGCACTTAGGAGGTAATGCTTGAGAGAATAATAATAATAAAAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCACTTAGGAGGTAATGCTTGAGAGAATAATAATAATAAAAGAATG  150

seq1  GCTTTACAATATCTTACTAGTGAGAGATTTTTAGTTCCTTTAGTCGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACAATATCTTACTAGTGAGAGATTTTTAGTTCCTTTAGTCGGGTT  200

seq1  TTTAAATTTTTTTCTTCAATCTTGAGAATTTTTTTCCCACCCACAGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTTTCTTCAATCTTGAGAATTTTTTTCCCACCCACAGGTCT  250

seq1  ACAGGTCTACAAAGCAGATACACAGATCTGATATGTACTGATAATAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCTACAAAGCAGATACACAGATCTGATATGTACTGATAATAAATG  300

seq1  ACAAAGAAATATATTTTAGAAAATTTGCTTGATATACATAAATATTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAATATATTTTAGAAAATTTGCTTGATATACATAAATATTATTA  350

seq1  CTTATTAAAGATAAAAACAAATTTGTCAACTGGCAAGATAAATGTGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAAGATAAAAACAAATTTGTCAACTGGCAAGATAAATGTGCTTG  400

seq1  TTTGTTGAACACAATAAAATAAAAATATACTGATTTAATATATTCTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAACACAATAAAATAAAAATATACTGATTTAATATATTCTGATT  450

seq1  AATAATGGTAGGAAAATATTAAAAGTTTTGTTCTTGGAAATTAAACCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGGTAGGAAAATATTAAAAGTTTTGTTCTTGGAAATTAAACCATT  500

seq1  TCATTTCTATTAGAGCAGAAACTTTCATATGTACAATGGAAACCACTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTATTAGAGCAGAAACTTTCATATGTACAATGGAAACCACTGCA  550

seq1  GTTCACTGCAGTTCAACACACACACACACACACAGACACACACACACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTGCAGTTCAACACACACACACACACACAGACACACACACACAAA  600

seq1  CACATACACACTAATTTTGAGTCTGAGTCAAGGTGTCTTGTGCAGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACACTAATTTTGAGTCTGAGTCAAGGTGTCTTGTGCAGTTTTC  650

seq1  ATTGATACTATTTGACATCACATTGTAGGGTTTATAGAATGT  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATACTATTTGACATCACATTGTAGGGTTTATAGAATGT  692


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