BAC Information

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BAC

Clone NameB6Ng01-200F16
Chromosome17 (Build37)
Map Location 63,333,913 - 63,334,845
singlet/doubletsinglet
Overlap genenone
Upstream geneEfna5
Downstream geneFbxl17, Ppia-ps17_1026.1, LOC638867, LOC668677, A930002H24Rik, Fert2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200F16.bB6Ng01-200F16.g
ACCGA021440GA021441
length633953
definitionB6Ng01-200F16.b B6Ng01-200F16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttggagtttcct
aaggtgccatgaacatagtggaacatgtccccctgtagcatggcagggat
tcttttgggtatattcccaaaagtggtatagctgggtcttcaggtaaatc
tattttcaattttctgagaaacctcctgcttgatttccagaatggttgta
ccagtctgaaatcccaccaacaatggaggagagttcctctttgtccacat
tctctccaacttgtgctgtcacctgaagttttgatcttaaccattctgac
tggtgtaaggtggaatctcagggtcattgtgatttgcatttctctaatta
ctaaggacttccaaacatttctctaggtgcttctcagccgtttgagattc
cctcagttgttaatctcggttttagctctatacctcatttttttgtagtg
ttgtgtgtatatctgttttaggtaaccaacttg

gaattccaggtccctgctggacatgtccttatagggagagaggaaattga
actgtgatttggccaccaggctacctcacaggtggcagagaggccacatg
taccagaacatgcagacccagagtaagaggggaactatcctaactcctgc
cagtctcaggatgtttagcatttggacacgtctccacctcactcttgctc
tagactggggaccctaaaagcttggctttccagccccacactacacctta
ctctcagccccctccttctctgttccagttgaccattgagtcaacaacct
catcctcgccctcctgccagccatggtgaacccaggatcattacagccaa
ggactgcagacagaaatccctggagctgtgaactaaagttaagtccttac
aactttcagttgtttcaggcatccggccataggatcagggagctaagtaa
agcagagtattggtgtcagaggacgcccactgctatgattaaacctgact
ctgtggttgctaagcctctggaactggcttatgagagaaagctaggaagt
tggacagagatgctctaaatgctgtaaacacaacttaatgagaggctgca
gcaggagcccaggagaccagcgtgctgacagggaatgcagacggtggagc
aaagaccagtctcaaaagctttctgagtagaaagaaaataaggacttgac
tgggactcagattagaagccagtcatgtaaaatcccccagagggtctgtg
gctcacaacttggagtgaggctgaattttaaagtaatggacctattaatt
tgggggggggggccagtatttccaatacaaattagagctatgggttattg
aaacatgttcacaatctaaaaaagatatcgagtagggtaattgagactcc
aggcttgttggctaagaagaatcatcctgtagtcgatgcccagcctgggc
tac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_63333913_63334845
seq2: B6Ng01-200F16.g_70_1022

seq1  GAATTCCAGGTCCCTGCTGGACATGTCCTTATAGGGAGAGAGGAAATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCCCTGCTGGACATGTCCTTATAGGGAGAGAGGAAATTGA  50

seq1  ACTGTGATTTGGCCACCAGGCTACCTCACAGGTGGCAGAGAGGCCACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATTTGGCCACCAGGCTACCTCACAGGTGGCAGAGAGGCCACATG  100

seq1  TACCAGAACATGCAGACCCAGAGTAAGAGGGGAACTATCCTAACTCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAACATGCAGACCCAGAGTAAGAGGGGAACTATCCTAACTCCTGC  150

seq1  CAGTCTCAGGATGTTTAGCATTTGGACACGTCTCCACCTCACTCTTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCAGGATGTTTAGCATTTGGACACGTCTCCACCTCACTCTTGCTC  200

seq1  TAGACTGGGGACCCTAAAAGCTTGGCTTTCCAGCCCCACACTACACCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGGGGACCCTAAAAGCTTGGCTTTCCAGCCCCACACTACACCTTA  250

seq1  CTCTCAGCCCCCTCCTTCTCTGTTCCAGTTGACCATTGAGTCAACAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCCCCCTCCTTCTCTGTTCCAGTTGACCATTGAGTCAACAACCT  300

seq1  CATCCTCGCCCTCCTGCCAGCCATGGTGAACCCAGGATCATTACAGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCGCCCTCCTGCCAGCCATGGTGAACCCAGGATCATTACAGCCAA  350

seq1  GGACTGCAGACAGAAATCCCTGGAGCTGTGAACTAAAGTTAAGTCCTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGCAGACAGAAATCCCTGGAGCTGTGAACTAAAGTTAAGTCCTTAC  400

seq1  AACTTTCAGTTGTTTCAGGCATCCGGCCATAGGATCAGGGAGCTAAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCAGTTGTTTCAGGCATCCGGCCATAGGATCAGGGAGCTAAGTAA  450

seq1  AGCAGAGTATTGGTGTCAGAGGACGCCCACTGCTATGATTAAACCTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTATTGGTGTCAGAGGACGCCCACTGCTATGATTAAACCTGACT  500

seq1  CTGTGGTTGCTAAGCCTCTGGAACTGGCTTATGAGAGAAAGCTAGGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTGCTAAGCCTCTGGAACTGGCTTATGAGAGAAAGCTAGGAAGT  550

seq1  TGGACAGAGATGCTCTAAATGCTGTAAACACAACTTAATGAGAGGCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGAGATGCTCTAAATGCTGTAAACACAACTTAATGAGAGGCTGCA  600

seq1  GCAGGAGCCCAGGAGACCAGCGTGCTGACA-GGAATGCAGACGGTGGAGC  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCAGGAGCCCAGGAGACCAGCGTGCTGACAGGGAATGCAGACGGTGGAGC  650

seq1  -AAGACCAGTCTCAAAAGC-TTCTGAGTAGAAAG-AAATAAGGACTTGAC  696
       |||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  AAAGACCAGTCTCAAAAGCTTTCTGAGTAGAAAGAAAATAAGGACTTGAC  700

seq1  TGGGACTCAGATTAGAAGCCAGTCATGTAAAATCCCCCAAGAGGGTCTGT  746
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGGACTCAGATTAGAAGCCAGTCATGTAAAATCCCCC-AGAGGGTCTGT  749

seq1  GGCTCACAACTTGGAGTGAGGCTGAA-TTTAAAGTAATGGACCTATTAAT  795
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGCTCACAACTTGGAGTGAGGCTGAATTTTAAAGTAATGGACCTATTAAT  799

seq1  TTGGGGGGGGGG--CAGTATTT-CAATACAAATTAGAGC-AT-GGTTATT  840
      ||||||||||||  |||||||| |||||||||||||||| || |||||||
seq2  TTGGGGGGGGGGGCCAGTATTTCCAATACAAATTAGAGCTATGGGTTATT  849

seq1  GAAA-ATG-TCACAA-CT-AAAAAGAAATCGAGTAGGGT-ATTGAGACT-  884
      |||| ||| |||||| || ||||||| |||||||||||| ||||||||| 
seq2  GAAACATGTTCACAATCTAAAAAAGATATCGAGTAGGGTAATTGAGACTC  899

seq1  CAGGCT--GTGGC-AAG-AGAATCACCATGAGTTCGAAG-CCAGCCTGGG  929
      ||||||   |||| ||| ||||||| | ||   |||| | ||||||||||
seq2  CAGGCTTGTTGGCTAAGAAGAATCATCCTGTAGTCGATGCCCAGCCTGGG  949

seq1  CTAC  933
      ||||
seq2  CTAC  953


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