BAC Information

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BAC

Clone NameB6Ng01-201D20
Chromosome17 (Build37)
Map Location 92,435,543 - 92,436,743
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
Downstream geneEG640442, LOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201D20.bB6Ng01-201D20.g
ACCGA022073GA022074
length1,0591,196
definitionB6Ng01-201D20.b B6Ng01-201D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccattcgtcaattctcgatcttacagcacaagccattgctgct
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtggaagatcaagt
ggccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtttgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgtgttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgaaatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttcctttgttagagtcacgccgggattcggtttagcga
gaatttaatgaggattttttatcgatattcattagagaatttggtctgta
gtctctatcttttgatggggttttttctgtgggttaggatatcagaagtt
atatgggcc
gaattcttagcaaaggaattttgaatggttaagaagcagttaaagagatg
ttcaatgcccctagttatcagggaaatgcaaatcaaaaagaccttgacat
tgcatcttgtacccatgagaatggctaatataaaaaattcaagtgacagt
acatgctggtgagggtgtggatgagaaaggaaaagacttctccattgctg
gcaggagtacaaaacaggtatcaaattcctttctctttcttttctttttc
tttcttttctctttctttctttctttcttcctttcttcctttctttctat
tttttttttatttacgtttcaagcccttcctggtttcccctccaaaaccc
ccctatctcctcactccttcccctgctcactaaccaactcctgcttccta
gccctggtattcccctacactaagtcttagagccttcacaggacaacggg
cctctcctcccattgatgaccgactaggccatcatctgctacatatacat
ctggagcaatgagtcccaccatgtgtgtttttggttggtgatttagtgcc
tgagcactctggacatactggttggctccattgttgttcctcctatgggg
ctgaaagcccctttagctccttgcgtactttctctagctccttcattggg
gaccctgtgctaagtccaatggatgactgtgagcacccacttctgtgttt
gtcaggcactggcagagcctttcaggagacagctataacaggcaagctct
ttttggcatccacaatagagtctggttttgtcaattgtatatgggatgga
tccccaggtaggacagtctctggatggtcattccttcactctctgctcca
tactttttctctgtaattctttccataagtgttttgttcccccttttaag
aaggatcgaagtatccacactatggtcttccttctttatgagtttcatgt
gtttgttaatgaaagccattctgattgtggtaatgttttaagtttaattt
gcatttccctgtgagagtcattttttaaaatcgtgatacaaaccacagaa
ggcttatgactactactaaatttacttaaatcttattgaaagtgttttat
ataattacattttacctctctcaaagaattataacatgcctgtgaaattt
catgtgatacctcactgatccagattctattatgaaagttctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92435543_92436743
seq2: B6Ng01-201D20.g_66_1261

seq1  GAATTCTTAGCAAAGGAATTTTGAATGGTTAAGAAGCAGTTAAAGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAAAGGAATTTTGAATGGTTAAGAAGCAGTTAAAGAGATG  50

seq1  TTCAATGCCCCTAGTTATCAGGGAAATGCAAATCAAAAAGACCTTGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGCCCCTAGTTATCAGGGAAATGCAAATCAAAAAGACCTTGACAT  100

seq1  TGCATCTTGTACCCATGAGAATGGCTAATATAAAAAATTCAAGTGACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTGTACCCATGAGAATGGCTAATATAAAAAATTCAAGTGACAGT  150

seq1  ACATGCTGGTGAGGGTGTGGATGAGAAAGGAAAAGACTTCTCCATTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGGTGAGGGTGTGGATGAGAAAGGAAAAGACTTCTCCATTGCTG  200

seq1  GCAGGAGTACAAAACAGGTATCAAATTCCTTTCTCTTTCTTTTCTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTACAAAACAGGTATCAAATTCCTTTCTCTTTCTTTTCTTTTTC  250

seq1  TTTCTTTTCTCTTTCTTTCTTTCTTTCTTCCTTTCTTCCTTTCTTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTCTTTCTTTCTTTCTTTCTTCCTTTCTTCCTTTCTTTCTAT  300

seq1  TTTTTTTTTATTTACGTTTCAAGCCCTTCCTGGTTTCCCCTCCAAAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTATTTACGTTTCAAGCCCTTCCTGGTTTCCCCTCCAAAACCC  350

seq1  CCCTATCTCCTCACTCCTTCCCCTGCTCACTAACCAACTCCTGCTTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCTCCTCACTCCTTCCCCTGCTCACTAACCAACTCCTGCTTCCTA  400

seq1  GCCCTGGTATTCCCCTACACTAAGTCTTAGAGCCTTCACAGGACAACGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGTATTCCCCTACACTAAGTCTTAGAGCCTTCACAGGACAACGGG  450

seq1  CCTCTCCTCCCATTGATGACCGACTAGGCCATCATCTGCTACATATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCCCATTGATGACCGACTAGGCCATCATCTGCTACATATACAT  500

seq1  CTGGAGCAATGAGTCCCACCATGTGTGTTTTTGGTTGGTGATTTAGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCAATGAGTCCCACCATGTGTGTTTTTGGTTGGTGATTTAGTGCC  550

seq1  TGAGCACTCTGGACATACTGGTTGGCTCCATTGTTGTTCCTCCTATGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACTCTGGACATACTGGTTGGCTCCATTGTTGTTCCTCCTATGGGG  600

seq1  CTGAAAGCCCCTTTAGCTCCTTGCGTACTTTCTCTAGCTCCTTCATTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGCCCCTTTAGCTCCTTGCGTACTTTCTCTAGCTCCTTCATTGGG  650

seq1  GACCCTGTGCTAAGTCCAATGGATGACTGTGAGCACCCACTTCTGTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGTGCTAAGTCCAATGGATGACTGTGAGCACCCACTTCTGTGTTT  700

seq1  GTCAGGCACTGGCAGAGCCTTTCAGGAGACAGCTATAACAGGCAAGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCACTGGCAGAGCCTTTCAGGAGACAGCTATAACAGGCAAGCTCT  750

seq1  TTTTGGCATCCACAATAGAGTCTGGTTTTGTCAATTGTATATGGGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCATCCACAATAGAGTCTGGTTTTGTCAATTGTATATGGGATGGA  800

seq1  TCCCCAGGTAGGACAGTCTCTGGATGGTCATTCCTTCACTCTCTGCTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGTAGGACAGTCTCTGGATGGTCATTCCTTCACTCTCTGCTCCA  850

seq1  TACTTTTTCTCTGTAATTCTTTCCATAGGTGTTTTGTTCCCCCTTTTAAG  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TACTTTTTCTCTGTAATTCTTTCCATAAGTGTTTTGTTCCCCCTTTTAAG  900

seq1  AAGGATCGAAGTATCCACACTATGGTCTTCCTTCTTTATGAGTTTCATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCGAAGTATCCACACTATGGTCTTCCTTCTTTATGAGTTTCATGT  950

seq1  GGTTTGTTAATGAAAGCCATTCTGATTGTGGTAATGTATTAAGTTTAATT  1000
       |||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  -GTTTGTTAATGAAAGCCATTCTGATTGTGGTAATGTTTTAAGTTTAATT  999

seq1  TGCATTTCCCTGTTGAGAGTCATTTTTTAAAAATCGTGATACAA--CACA  1048
      |||||||||||| ||||||||||||||| |||||||||||||||  ||||
seq2  TGCATTTCCCTG-TGAGAGTCATTTTTT-AAAATCGTGATACAAACCACA  1047

seq1  GA--GC-TATGAACTACCTACTAAATTAACTTAAATCTTTAATGAAAAGT  1095
      ||  || |||| |||| |||||||||| |||||||||||  ||  |||||
seq2  GAAGGCTTATG-ACTA-CTACTAAATTTACTTAAATCTT--ATTGAAAGT  1093

seq1  G-TTTATATAATTACTATTTTACTTTCTTCAAAGGATTATACAATG-CTG  1143
      | ||||||||||||| ||||||| |   |||||| ||||||  ||| |||
seq2  GTTTTATATAATTAC-ATTTTACCTCTCTCAAAGAATTATAACATGCCTG  1142

seq1  TGAATATTCATGTGATCACTTCACTGTATCTCAGTATCTATTTATGAAAG  1193
      ||||  |||||||||| || |||||| ||| |||  |||| |||||||||
seq2  TGAAATTTCATGTGAT-ACCTCACTG-ATC-CAGATTCTA-TTATGAAAG  1188

seq1  TTCTCTGA  1201
      ||||||||
seq2  TTCTCTGA  1196