BAC Information

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BAC

Clone NameB6Ng01-204N04
Chromosome17 (Build37)
Map Location 59,957,638 - 59,958,566
singlet/doubletsinglet
Overlap genenone
Upstream gene2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204N04.bB6Ng01-204N04.g
ACCGA024660GA024661
length965524
definitionB6Ng01-204N04.b B6Ng01-204N04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactattacaaataactgtatttctctttatgtactgttctctg
actcacaaaatcactagacttttttagatagcttgaatactctaacttcc
cacttcaggactatatttatgaaagtagtactacaatattcaggaaataa
tatacttttgtgtatacaaattaatgataactatgtgtttgtgtgtggca
agtgagttagtgtatttacatgtttatgtgcatgtgcttgtgagtagaga
tcaggggttgatgaggattcctgttagaccccccccaactgggttattaa
caccaccttttttccaatttttaattaaatttatttattaaaattaattt
attaattaataagcactaactttttattaataaaattattaatttagcaa
aactattcattatctattgacagaagagtcttttttaattaggtattttc
ttcatttacatttcaaatgctatcccaaaagtcccccaggccctcccccc
tcccactgccctccccctccactcccacttcttggccctggcgttcctct
gtactgaggcatataaagtttgcacgaccaatgggcctctcttcccaatg
atagccgactaggccatcttctgatacatatgcagctagagacatgagct
cccggggatactggttagttcatatttgttgtttcaccctatagggttgc
agacctctttagctccttggggtactttcctctagctcctccatttggga
gtcctgtgttccatcccaatagctgtatttaagaccatcctttggactct
accaaacttatcttccctgatttcattacaaaaccaccacttcaacactt
gggggtgacagctccttaattttatgttttaaccagtcaactatgaatgc
cccaagaatttggtctttaattccctcaaaagctttttaagccaaattta
atccattaaattgaa

actctcgcacctgcatacaaggcttgtttactagttaggcacagcggagg
cctgcaccatcttataatggcaattgctcacggcacacacggctctcctc
agagattactggcggcacgtatgcgattgctcgcagcacgtaccggccct
ccacacatctcctgatgtcttcttcgatttctttgaatggctgagaagca
cctaaagaaatgtttaacttccttagtcatcagagaaatgcaacaaatga
gagacccctgtgtttgaattagaggaaagatggaagaaactgaggaggag
catcaccctgtaggaggattagcagtctcaattaacctggacccagaata
tctctgacactggaacaccaaccaggcagcatacatcagctgatatgagg
ccctcaacacatatatagcagaggactgcagggtctgggttcattcagag
atgttgtatgtaaccctcaagagactggaagtcccaaagaatggtcggga
ctggtggggtggagggtggagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59957638_59958566
seq2: B6Ng01-204N04.b_43_995

seq1  GAATTCAACTATTACAAATAACTGTATTTCTCTTTATGTACTGTTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTATTACAAATAACTGTATTTCTCTTTATGTACTGTTCTCTG  50

seq1  ACTCACAAAATCACTAGACTTTTTTAGATAGCTTGAATACTCTAACTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAAATCACTAGACTTTTTTAGATAGCTTGAATACTCTAACTTCC  100

seq1  CACTTCAGGACTATATTTATGAAAGTAGTACTACAATATTCAGGAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGGACTATATTTATGAAAGTAGTACTACAATATTCAGGAAATAA  150

seq1  TATACTTTTGTGTATACAAATTAATGATAACTATGTGTTTGTGTGTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTGTGTATACAAATTAATGATAACTATGTGTTTGTGTGTGGCA  200

seq1  AGTGAGTTAGTGTATTTACATGTTTATGTGCATGTGCTTGTGAGTAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTAGTGTATTTACATGTTTATGTGCATGTGCTTGTGAGTAGAGA  250

seq1  TCAGGGGTTGATGAGGATTCCTGTTAGACCCCCCCCAACTGGGTTATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGTTGATGAGGATTCCTGTTAGACCCCCCCCAACTGGGTTATTAA  300

seq1  CACCACCTTTTTTCCAATTTTTAATTAAATTTATTTATTAAAATTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCTTTTTTCCAATTTTTAATTAAATTTATTTATTAAAATTAATTT  350

seq1  ATTAATTAATAAGCACTAACTTTTTATTAATAAAATTATTAATTTAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAATAAGCACTAACTTTTTATTAATAAAATTATTAATTTAGCAA  400

seq1  AACTATTCATTATCTATTGACAGAAGAGTCTTTTTTAATTAGGTATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCATTATCTATTGACAGAAGAGTCTTTTTTAATTAGGTATTTTC  450

seq1  TTCATTTACATTTCAAATGCTATCCCAAAAGTCCCCCAGGCCCTCCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTACATTTCAAATGCTATCCCAAAAGTCCCCCAGGCCCTCCCCCC  500

seq1  TCCCACTGCCCTCCCCCTCCACTCCCACTTCTTGGCCCTGGCGTTCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGCCCTCCCCCTCCACTCCCACTTCTTGGCCCTGGCGTTCCTCT  550

seq1  GTACTGAGGCATATAAAGTTTGCACGACCAATGGGCCTCTCTTCCCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGGCATATAAAGTTTGCACGACCAATGGGCCTCTCTTCCCAATG  600

seq1  ATAGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCT  650

seq1  -CCGGGGATACTGGTTAGTTCATA-TTGTTGTTTCA-CCTATAGGGTTGC  697
       ||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  CCCGGGGATACTGGTTAGTTCATATTTGTTGTTTCACCCTATAGGGTTGC  700

seq1  AGACCTCTTTAGCTCCTT-GGGTACTTT-CTCTAGCTCCTCCA-TTGGGA  744
      |||||||||||||||||| ||||||||| |||||||||||||| ||||||
seq2  AGACCTCTTTAGCTCCTTGGGGTACTTTCCTCTAGCTCCTCCATTTGGGA  750

seq1  GTCCTGTGTTCCAT-CCAATAGCTGTA-TTAAGACCATC--TTTGACTCT  790
      |||||||||||||| |||||||||||| |||||||||||  || ||||||
seq2  GTCCTGTGTTCCATCCCAATAGCTGTATTTAAGACCATCCTTTGGACTCT  800

seq1  ACC-AACTTATCTT-CCTGATTTCATTAC-AAACCACCAC-TCAACACT-  835
      ||| |||||||||| |||||||||||||| |||||||||| |||||||| 
seq2  ACCAAACTTATCTTCCCTGATTTCATTACAAAACCACCACTTCAACACTT  850

seq1  -GGGGTGACAGCT-CTTAA-TTTATGTTTTAA-CAGTCAACTTTGAATG-  880
       |||||||||||| ||||| |||||||||||| ||||||||| |||||| 
seq2  GGGGGTGACAGCTCCTTAATTTTATGTTTTAACCAGTCAACTATGAATGC  900

seq1  CCCTAGA--TTTGTCTTTTATTCCCTCAAAAGC-TTTTAAG-CAAAATTA  926
      ||| |||  || |||||| |||||||||||||| ||||||| |||| |||
seq2  CCCAAGAATTTGGTCTTTAATTCCCTCAAAAGCTTTTTAAGCCAAATTTA  950

seq1  ATC  929
      |||
seq2  ATC  953


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