BAC Information

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BAC

Clone NameB6Ng01-206D24
Chromosome17 (Build37)
Map Location 57,435,064 - 57,435,913
singlet/doubletsinglet
Overlap geneVav1
Upstream geneArrdc5, Uhrf1, Jmjd2b, Ptprs, EG668592, Znrf4, Safb2, Safb, 2410015M20Rik, Rpl36, Lonp1, LOC619718, Tmem146, Ranbp3, Ccpn-ps, AI662250, Ndufa11, Fut4-ps1, Nrtn, Dus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635
Downstream geneEmr1, EG224916, Cntnap5c, LOC674419
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206D24.bB6Ng01-206D24.g
ACCGA025715GA025716
length1,022850
definitionB6Ng01-206D24.b B6Ng01-206D24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtaggcttcttgtatgttcatgggcatctctttctttaggttt
gggaagttttcttctataattttgttgaagatatttgctggcccgttgag
ttgaaaatcttcattctcgactcgagactcgagccccgtgctaccttgcc
agcagagtcttgcccaacacccgcaagggtccacacaggactccccacgg
gaccctaagacctctggcgagtggaccacagtgcctgccccaatccaatc
gcgcggaactcgagactgcggtacatagggaagcaggctacccgggcctg
atctggggcacaagtcccttccgctcgactcgagactcgagccccgggct
accttgccagcagagtcttgcccaacacccgcaagggcccacacgggact
ccccacgggaccctaagacctctggtgagtggaacacagcgcctacccca
atccaatcgcgtggaacttgagactgcggtacatagggaagcaggctacc
cgggcttgatctggggcacaaaccccttccactccacttgagccccgggc
taccttgccagctgagtcgcctgacacccgcaagggcccacacaggtttc
cacacgtgatcctaagacctctagtgagtggaacacaacttctgccagga
gtctgggtcgaacaccagatatctgggtacctgccttgcaagaagagagc
ttgcctgcagagaatactctgcccactgaaactaaagagagtgctaccct
ccaggtctgctcatagaggctaacagagtcacctgaagaacaagctctta
acagtgacaactaaaaacagctagcttcggagtattaccagatggcgaaa
ggcaaaacgtaggattcctactaacagaaatcaagaccactcatccatca
ccagaacgcagcacgtccaccccaacctagtcctggggcaccccaacact
aaccgaaatcttgacccggatttaaaaacctttctcctgatgattgatag
aggacatcaaagaaggactttc
gaattcaaggccagcacaaggcgagcacagtttttgttaattatcattat
tattgtgggtgtgactgtacctgcatgcgccacagctcccatgtagaggt
gaaaggacaactttgtggagtcttcttctccttgtccatctttgtgtggg
ttctgtggattaaactcaggcttacacagcacgcactttcagctgaagag
ctatcctgccagccctattttgcttttatttacacatatatttatttttt
atatctgtgttttctggtttgcctgtgtgtgtatgtgtgtgtacacacac
acaccatattgtatccccagcctcatttctctttgccatagttcctttgt
cttaagaacattcgaaccttcctgtctacttgctgtgagaagttcggcct
caagcgcagtgaactctttgaggcttttgacctcttcgatgtgcaggact
ttggaaaggtgagctggattcccagtgcccaaagactggactttgattca
tttctagtactgactagtatgcttgagtgcgcgcgtgcgcctgagggtct
gcctgtgcatgtgcccatagactactagggagcttcctgctcgtgagctt
ggggcatggggaacaagttcaagggtctgttcacctacttttctgtgtga
ccttggctggtgctgtgtggttctgcccctctgatctctcatctttccta
cgtaacaagttattgccttgtcttgcctgagtgattgtgtggacctgata
gtggggagacattgtctggggtgcagggatgtatagaagatgctgggtta
tgctcctcaaagtctggtgggcatgtctaacatcaagggatacttcaggt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_57435064_57435913
seq2: B6Ng01-206D24.g_64_913

seq1  GAATTCAAGGCCAGCACAAGGCGAGCACAGTTTTTGTTAATTATCATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCACAAGGCGAGCACAGTTTTTGTTAATTATCATTAT  50

seq1  TATTGTGGGTGTGACTGTACCTGCATGCGCCACAGCTCCCATGTAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGGTGTGACTGTACCTGCATGCGCCACAGCTCCCATGTAGAGGT  100

seq1  GAAAGGACAACTTTGTGGAGTCTTCTTCTCCTTGTCCATCTTTGTGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACAACTTTGTGGAGTCTTCTTCTCCTTGTCCATCTTTGTGTGGG  150

seq1  TTCTGTGGATTAAACTCAGGCTTACACAGCACGCACTTTCAGCTGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGATTAAACTCAGGCTTACACAGCACGCACTTTCAGCTGAAGAG  200

seq1  CTATCCTGCCAGCCCTATTTTGCTTTTATTTACACATATATTTATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGCCAGCCCTATTTTGCTTTTATTTACACATATATTTATTTTTT  250

seq1  ATATCTGTGTTTTCTGGTTTGCCTGTGTGTGTATGTGTGTGTACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTGTTTTCTGGTTTGCCTGTGTGTGTATGTGTGTGTACACACAC  300

seq1  ACACCATATTGTATCCCCAGCCTCATTTCTCTTTGCCATAGTTCCTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATATTGTATCCCCAGCCTCATTTCTCTTTGCCATAGTTCCTTTGT  350

seq1  CTTAAGAACATTCGAACCTTCCTGTCTACTTGCTGTGAGAAGTTCGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAACATTCGAACCTTCCTGTCTACTTGCTGTGAGAAGTTCGGCCT  400

seq1  CAAGCGCAGTGAACTCTTTGAGGCTTTTGACCTCTTCGATGTGCAGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGCAGTGAACTCTTTGAGGCTTTTGACCTCTTCGATGTGCAGGACT  450

seq1  TTGGAAAGGTGAGCTGGATTCCCAGTGCCCAAAGACTGGACTTTGATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGGTGAGCTGGATTCCCAGTGCCCAAAGACTGGACTTTGATTCA  500

seq1  TTTCTAGTACTGACTAGTATGCTTGAGTGCGCGCGTGCGCCTGAGGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTACTGACTAGTATGCTTGAGTGCGCGCGTGCGCCTGAGGGTCT  550

seq1  GCCTGTGCATGTGCCCATAGACTACTAGGGAGCTTCCTGCTCGTGAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGCATGTGCCCATAGACTACTAGGGAGCTTCCTGCTCGTGAGCTT  600

seq1  GGGGCATGGGGAACAAGTTCAAGGGTCTGTTCACCTAC-TTTCTGTGTGA  649
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGGGCATGGGGAACAAGTTCAAGGGTCTGTTCACCTACTTTTCTGTGTGA  650

seq1  CCTTGGCTGGTGCTGTGTGGTTCTGCCCCTCTGATCTCTCATCTTTCCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTGGTGCTGTGTGGTTCTGCCCCTCTGATCTCTCATCTTTCCTA  700

seq1  CGTAACAAGTTATTGCCTTGTCTTGCCTGAGTGATTGTGTGGACCTGATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAACAAGTTATTGCCTTGTCTTGCCTGAGTGATTGTGTGGACCTGATA  750

seq1  GTGGGGAGACATTGTCTGGGGTGCAGGGATGTATAGAAGATGCTGGGTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGACATTGTCTGGGGTGCAGGGATGTATAGAAGATGCTGGGTTA  800

seq1  TGCTCCTCAAAGTCTGGTGGGCATGTCTAACATCAAGGGATAGCTTCAGG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCTCCTCAAAGTCTGGTGGGCATGTCTAACATCAAGGGATA-CTTCAGG  849

seq1  T  850
      |
seq2  T  850