BAC Information

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BAC

Clone NameB6Ng01-207B13
Chromosome17 (Build37)
Map Location 32,662,363 - 32,801,742
singlet/doubletdoublet
Overlap geneEG208285, Cyp4f16, LOC667178, LOC677156, EG631304
Upstream gene1500032D16Rik, Pknox1, Cbs, LOC623242, U2af1, Cryaa, Snf1lk, Hsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik
Downstream geneCyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207B13.bB6Ng01-207B13.g
ACCGA026339GA026340
length918682
definitionB6Ng01-207B13.b B6Ng01-207B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,662,363 - 32,663,269)(32,801,061 - 32,801,742)
sequence
gaattcctaggtcatatcctctatctacttttctcttgggttatgtatcc
tttgcttgtggcttgcacaatttacacacacacacacacacacacacaca
cacatgataatagacagacaggatcccagaaacccgtgaatgactctttt
gaatactattgtggtccatggtattttttttttttcttttgagacagggt
ttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctg
gcctagaactcagaagtcctcctgcctctgcctctcaagtgctgggatta
aaggcgtcagccaccaccgcctgttttttttttttttgttgttgttgttg
ttgttgttaagatttatttattattatacctaagtacactgtagctgtct
tcagatacaccaaaagaaggtgccagatctcattaccatgcggttgctgg
gatttgaactcaggaccttcgccatggtatgttaagacatatagattgtt
gatttctgtgaataacatactccctcttccttctggtatttaagtttaag
cttttggtgttctgtcataaagctgtcacttgtgctattttacttggact
tttttttttttttttaaattctcctcagtcagtctggtaaggatctgaga
cgtgggtacagaattgcagtcagtcagtggtgctctctccactagttcag
gtgtggttaacaatacatgctgcacgttttattctcacacaaatacatga
tagtggaaaattccgttcttagtcagaacagacaaatatttatttttaaa
ctttactcacttttaaaaaagattgacttttattttctgtctgtgtgttg
ggttgtgtacaggtgagtgagtgtgagtgcccttggaagccaaaaaggtg
tctaaactcccctggatc
gaattctagccagccctttctccatccctgcctgaggttcctccagacat
cttctgtacatagcaatcctcaaccctcagttagagggacagaaagacac
attcactcttacgatctcaaacacctgggttctcttccctacccttctcc
agactgaaggccaggcattcaagtccattgagctcagtctcccacatagt
aagtgaagtatctgagacctgatcctgagactttacatcagtatcctgga
ttcttaccagtgcatctatctgctttgcgtttcccaggtcttcccaagat
cgcatagagacggtgacttaataaggactctctgtcttgtggttcagggc
agcaaattcaaattagttacaagcccagaactcctgggaacgccacgcgt
gagacaggttgtctcgtggtctgagactcatcacttagaccttgttgaaa
atgcttgtctgaaaggaaaagcgaggcctgggaaggtaaaacagacctga
agacaattctcccaggcaggccttcacagtctacagattccctttatttc
tttgaactaaaccaggtggacagcactcacacccaacaaagacctagcca
tgcacagagagcagacagccttcctggcagatgtcagagccatggtgtgg
gcccgtgggtgtggggggaaaatggagtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_32662363_32663269
seq2: B6Ng01-207B13.b_48_965

seq1  GAATTCCTAGGTCATATCCTCTATCTACTTTTCTCTTGGGTTATGTATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGTCATATCCTCTATCTACTTTTCTCTTGGGTTATGTATCC  50

seq1  TTTGCTTGTGGCTTGCACAATTTACACACACACACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGTGGCTTGCACAATTTACACACACACACACACACACACACACA  100

seq1  CACATGATAATAGACAGACAGGATCCCAGAAACCCGTGAATGACTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATAATAGACAGACAGGATCCCAGAAACCCGTGAATGACTCTTTT  150

seq1  GAATACTATTGTGGTCCATGGTATTTTTTTTTTTTCTTTTGAGACAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTATTGTGGTCCATGGTATTTTTTTTTTTTCTTTTGAGACAGGGT  200

seq1  TTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTG  250

seq1  GCCTAGAACTCAGAAGTCCTCCTGCCTCTGCCTCTCAAGTGCTGGGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGAACTCAGAAGTCCTCCTGCCTCTGCCTCTCAAGTGCTGGGATTA  300

seq1  AAGGCGTCAGCCACCACCGCCTGTTTTTTTTTTTTTTGTTGTTGTTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTCAGCCACCACCGCCTGTTTTTTTTTTTTTTGTTGTTGTTGTTG  350

seq1  TTGTTGTTAAGATTTATTTATTATTATACCTAAGTACACTGTAGCTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTAAGATTTATTTATTATTATACCTAAGTACACTGTAGCTGTCT  400

seq1  TCAGATACACCAAAAGAAGGTGCCAGATCTCATTACCATGCGGTTGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATACACCAAAAGAAGGTGCCAGATCTCATTACCATGCGGTTGCTGG  450

seq1  GATTTGAACTCAGGACCTTCGCCATGGTATGTTAAGACATATAGATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAACTCAGGACCTTCGCCATGGTATGTTAAGACATATAGATTGTT  500

seq1  GATTTCTGTGAATAACATACTCCCTCTTCCTTCTGGTATTTAAGTTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGTGAATAACATACTCCCTCTTCCTTCTGGTATTTAAGTTTAAG  550

seq1  CTTTTGGTGTTCTGTCATAAAGCTGTCACTTGTGCTATTTTACTTGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTGTTCTGTCATAAAGCTGTCACTTGTGCTATTTTACTTGGACT  600

seq1  TTTTTTTTTTTTTTTAAATTCTCCTCAGTCAGTCTGGTAAGGATCTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTAAATTCTCCTCAGTCAGTCTGGTAAGGATCTGAGA  650

seq1  CGTGGGTACAGAATTGCAGTCAGTCAGTGGTGCTCTCTCCACTAGTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGTACAGAATTGCAGTCAGTCAGTGGTGCTCTCTCCACTAGTTCAG  700

seq1  GTGTGGTTAACAATACATGCTGCACG-TTTATTCTCACACAAATACATGA  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTGTGGTTAACAATACATGCTGCACGTTTTATTCTCACACAAATACATGA  750

seq1  TAGTGGAAAATTCCG-TCCTAGTCAGAACAGACAAATATTTATTTTTAA-  797
      ||||||||||||||| || |||||||||||||||||||||||||||||| 
seq2  TAGTGGAAAATTCCGTTCTTAGTCAGAACAGACAAATATTTATTTTTAAA  800

seq1  -CTTACTCAC-TTTAAAAAAGATTGACTTTTA-TTTCTGTCTGTGTGT--  842
        |||||||| ||||||||||||||||||||| |||||||||||||||  
seq2  CTTTACTCACTTTTAAAAAAGATTGACTTTTATTTTCTGTCTGTGTGTTG  850

seq1  GGGTGTGTACAGGTGAGTGAGTGTGAGTGCCCTTGGAAGCC-AGAAGGTG  891
      || |||||||||||||||||||||||||||||||||||||| | ||||||
seq2  GGTTGTGTACAGGTGAGTGAGTGTGAGTGCCCTTGGAAGCCAAAAAGGTG  900

seq1  TC--AAATCCCCTGGAGC  907
      ||  || ||||||||| |
seq2  TCTAAACTCCCCTGGATC  918

seq1: chr17_32801061_32801742
seq2: B6Ng01-207B13.g_65_746 (reverse)

seq1  TCCCACTCCATTTTCCCCCCACACCCACGGGCCCACACCATGGCTCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCCATTTTCCCCCCACACCCACGGGCCCACACCATGGCTCTGAC  50

seq1  ATCTGCCAGGAAGGCTGTCTGCTCTCTGTGCATGGCTAGGTCTTTGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCAGGAAGGCTGTCTGCTCTCTGTGCATGGCTAGGTCTTTGTTGG  100

seq1  GTGTGAGTGCTGTCCACCTGGTTTAGTTCAAAGAAATAAAGGGAATCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTGCTGTCCACCTGGTTTAGTTCAAAGAAATAAAGGGAATCTGT  150

seq1  AGACTGTGAAGGCCTGCCTGGGAGAATTGTCTTCAGGTCTGTTTTACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGAAGGCCTGCCTGGGAGAATTGTCTTCAGGTCTGTTTTACCTT  200

seq1  CCCAGGCCTCGCTTTTCCTTTCAGACAAGCATTTTCAACAAGGTCTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCCTCGCTTTTCCTTTCAGACAAGCATTTTCAACAAGGTCTAAGT  250

seq1  GATGAGTCTCAGACCACGAGACAACCTGTCTCACGCGTGGCGTTCCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTCTCAGACCACGAGACAACCTGTCTCACGCGTGGCGTTCCCAGG  300

seq1  AGTTCTGGGCTTGTAACTAATTTGAATTTGCTGCCCTGAACCACAAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGGCTTGTAACTAATTTGAATTTGCTGCCCTGAACCACAAGACA  350

seq1  GAGAGTCCTTATTAAGTCACCGTCTCTATGCGATCTTGGGAAGACCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCCTTATTAAGTCACCGTCTCTATGCGATCTTGGGAAGACCTGGG  400

seq1  AAACGCAAAGCAGATAGATGCACTGGTAAGAATCCAGGATACTGATGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCAAAGCAGATAGATGCACTGGTAAGAATCCAGGATACTGATGTAA  450

seq1  AGTCTCAGGATCAGGTCTCAGATACTTCACTTACTATGTGGGAGACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGATCAGGTCTCAGATACTTCACTTACTATGTGGGAGACTGAG  500

seq1  CTCAATGGACTTGAATGCCTGGCCTTCAGTCTGGAGAAGGGTAGGGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGGACTTGAATGCCTGGCCTTCAGTCTGGAGAAGGGTAGGGAAGA  550

seq1  GAACCCAGGTGTTTGAGATCGTAAGAGTGAATGTGTCTTTCTGTCCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGGTGTTTGAGATCGTAAGAGTGAATGTGTCTTTCTGTCCCTCT  600

seq1  AACTGAGGGTTGAGGATTGCTATGTACAGAAGATGTCTGGAGGAACCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGGGTTGAGGATTGCTATGTACAGAAGATGTCTGGAGGAACCTCA  650

seq1  GGCAGGGATGGAGAAAGGGCTGGCTAGAATTC  682
      ||||||||||||||||||||||||||||||||
seq2  GGCAGGGATGGAGAAAGGGCTGGCTAGAATTC  682