BAC Information

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BAC

Clone NameB6Ng01-209G22
Chromosome17 (Build37)
Map Location 76,954,821 - 77,097,658
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234, LOC100043887
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209G22.bB6Ng01-209G22.g
ACCGA028050GA028051
length8251,102
definitionB6Ng01-209G22.b B6Ng01-209G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,954,821 - 76,955,645)(77,096,559 - 77,097,658)
sequence
gaattcctacccttgcttcccaatgatcttttcacttattctctaccagc
atcgtgtatttggatatgaacagttgctagagttttagtgtacactttaa
atttataaatgatcaaaatttataacatgttgatattaaatgacaaggta
tagatttgctgggatcaaataatattttatctcctattttaaagattgga
gtgcctgccatgcttttaagtcttacagtctatggagctccagtctttga
tcttctcaacaacatacacaaaatcacacttttctgccttaagccattgg
tggttctatttgctactgttttgtgtgtgatgctgtagaagggctctgtg
ttttgccttctaaatcaccagcactgccctaatcatcttttctgaagcca
gaggaaggaagatgtcagcgttgagtcagcagttgtatgctctctgtgga
agtcatgcttttaacgtttctaaatctcatggatatttggggagatgagc
acaatgaaaatattcattgacatgtgttggatctcatggcaaacttgtat
ttttgtaagtctatttccagagcttttttttcctctcatcaaataatttt
agatagtctccagtagcttcatcatttttaaattttagtgtgaaatactt
tatcctcttcagtgctagcttatatgcaagaatcattattttacttgttt
atacaattggaacgactgagctgtggaaaggatcatctttgaagaagaaa
acaggacatctaaagagtatttccctaccgattcaaaagatcaagctgtg
cactagaatattgggtggggggggg

gaattctttccagctaagattctgagtcttaaggcagatcatcctaaaca
cccacacaaataccatttcttttactgttcattttttttgctgtttttgt
ttgtttttactttattatataattctctttttaatagaaaatacattgtt
ctaggaggtaatacatcccaaccacagattcccctccttctatgtttccc
agcatcacctccaacctgctcacccccatctgctcagctgctacctcacc
tcgccctctgattcactcctcctcagactcccctcagaaaacagcagacc
tccaagacacaacaagcaaacaggacaaaaaacaaaagacagtgatggga
gtccccaaaatgaactctgaactaggggattctgaggaagattggaggaa
agatttaagtcagagaggttggaggacaccagagaacacagttcactgaa
tcaactaaccatagtccatatgaacacacagcaactgaagtgagaagcat
gggtgtacatgggtatggacctggtcatttgtgtatatgctgtggttgtt
agcttgatatttttgttgggctgctaactgtgagatcaggtgagtctctg
actctttgaattgctctttcagactttttcttgaagatgtgcatgaggaa
tgtctattcagagaaattggattactagcctcttgtagccatgtggccaa
ttacagttaggggcttacatgcatgcatctcattgcgtgccctcccatga
tcttccatagtggatatctgaagtagtctctttgtcatgcactggtccat
cttgctttgtaatcttcagagacataatggcacttcaatctaagaaaata
gctcacactaagaggaaaaaaatgttaattcgaaacaagacaaaataaga
aaaataaaaaataagccagaatcactgagaattttgtaaatagtctccat
tcttctgctgaattacatattagactttatgataaacgatgaagaggact
gtttctgtttaaaatgcgttttagttgggaaatcttgataatctatgagc
ccaattgtttctctagcagaagctttaaattctagacgaatgtctttcat
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76954821_76955645
seq2: B6Ng01-209G22.b_49_873

seq1  GAATTCCTACCCTTGCTTCCCAATGATCTTTTCACTTATTCTCTACCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACCCTTGCTTCCCAATGATCTTTTCACTTATTCTCTACCAGC  50

seq1  ATCGTGTATTTGGATATGAACAGTTGCTAGAGTTTTAGTGTACACTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGTATTTGGATATGAACAGTTGCTAGAGTTTTAGTGTACACTTTAA  100

seq1  ATTTATAAATGATCAAAATTTATAACATGTTGATATTAAATGACAAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAATGATCAAAATTTATAACATGTTGATATTAAATGACAAGGTA  150

seq1  TAGATTTGCTGGGATCAAATAATATTTTATCTCCTATTTTAAAGATTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGCTGGGATCAAATAATATTTTATCTCCTATTTTAAAGATTGGA  200

seq1  GTGCCTGCCATGCTTTTAAGTCTTACAGTCTATGGAGCTCCAGTCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGCCATGCTTTTAAGTCTTACAGTCTATGGAGCTCCAGTCTTTGA  250

seq1  TCTTCTCAACAACATACACAAAATCACACTTTTCTGCCTTAAGCCATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCAACAACATACACAAAATCACACTTTTCTGCCTTAAGCCATTGG  300

seq1  TGGTTCTATTTGCTACTGTTTTGTGTGTGATGCTGTAGAAGGGCTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTATTTGCTACTGTTTTGTGTGTGATGCTGTAGAAGGGCTCTGTG  350

seq1  TTTTGCCTTCTAAATCACCAGCACTGCCCTAATCATCTTTTCTGAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTTCTAAATCACCAGCACTGCCCTAATCATCTTTTCTGAAGCCA  400

seq1  GAGGAAGGAAGATGTCAGCGTTGAGTCAGCAGTTGTATGCTCTCTGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGAAGATGTCAGCGTTGAGTCAGCAGTTGTATGCTCTCTGTGGA  450

seq1  AGTCATGCTTTTAACGTTTCTAAATCTCATGGATATTTGGGGAGATGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGCTTTTAACGTTTCTAAATCTCATGGATATTTGGGGAGATGAGC  500

seq1  ACAATGAAAATATTCATTGACATGTGTTGGATCTCATGGCAAACTTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAAAATATTCATTGACATGTGTTGGATCTCATGGCAAACTTGTAT  550

seq1  TTTTGTAAGTCTATTTCCAGAGCTTTTTTTTCCTCTCATCAAATAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAGTCTATTTCCAGAGCTTTTTTTTCCTCTCATCAAATAATTTT  600

seq1  AGATAGTCTCCAGTAGCTTCATCATTTTTAAATTTTAGTGTGAAATACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTCTCCAGTAGCTTCATCATTTTTAAATTTTAGTGTGAAATACTT  650

seq1  TATCCTCTTCAGTGCTAGCTTATATGCAAGAATCATTATTTTACTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTTCAGTGCTAGCTTATATGCAAGAATCATTATTTTACTTGTTT  700

seq1  ATACAATTGGAACGACTGAGCTGTGGAAAGGATCATCTTTGAAGAAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTGGAACGACTGAGCTGTGGAAAGGATCATCTTTGAAGAAGAAA  750

seq1  ACAGGACATCTAAAGAGTATTTCCCTACCGATTCAAAAGATCAAGCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACATCTAAAGAGTATTTCCCTACCGATTCAAAAGATCAAGCTGTG  800

seq1  CACTAGAATATTGGGTGGGGGGGGG  825
      |||||||||||||||||||||||||
seq2  CACTAGAATATTGGGTGGGGGGGGG  825


seq1: chr17_77096559_77097658
seq2: B6Ng01-209G22.g_67_1168 (reverse)

seq1  TCATGAAGGACA-TCGTCTAG-ATTTAAAGC-TCTGCTAAGAGAAACAAT  47
      ||||||| |||| |||||||| ||||||||| |||||| |||||||||||
seq2  TCATGAAAGACATTCGTCTAGAATTTAAAGCTTCTGCT-AGAGAAACAAT  49

seq1  TTGGCTCATAGA-TATCAAAGAATTTCCAACTAAAACGCATTTTAAACAG  96
      | |||||||||| |||| |||| || ||||||||||||||||||||||||
seq2  TGGGCTCATAGATTATC-AAGATTTCCCAACTAAAACGCATTTTAAACAG  98

seq1  AAACAGTCCTCTTCATCGTTTATCATAAAGTCTAATATGTAATTCAGCAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCCTCTTCATCGTTTATCATAAAGTCTAATATGTAATTCAGCAG  148

seq1  AAGAATGGAGACTATTTACAAAATTCTCAGTGATTCTGGCTTATTTTTTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGAGACTATTTACAAAATTCTCAGTGATTCTGGCTTATTTTTTA  198

seq1  TTTTTCTTATTTTGTCCTGTTTCGAATTAACATTTTTTTCCTCTTAGTGT  246
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTTTCTTATTTTGTCTTGTTTCGAATTAACATTTTTTTCCTCTTAGTGT  248

seq1  GAGCTATTTTCTTAGATTGAAGTGCCATTATGTCTCTGAAGATTACAAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATTTTCTTAGATTGAAGTGCCATTATGTCTCTGAAGATTACAAAG  298

seq1  CAAGATGGACCAGTGCATGACAAAGAGACTACTTCAGATATCCACTATGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGGACCAGTGCATGACAAAGAGACTACTTCAGATATCCACTATGG  348

seq1  AAGATCATGGGAGGGCACGCAATGAGATGCATGCATGTAAGCCCCTAACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATGGGAGGGCACGCAATGAGATGCATGCATGTAAGCCCCTAACT  398

seq1  GTAATTGGCCACATGGCTACAAGAGGCTAGTAATCCAATTTCTCTGAATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGGCCACATGGCTACAAGAGGCTAGTAATCCAATTTCTCTGAATA  448

seq1  GACATTCCTCATGCACATCTTCAAGAAAAAGTCTGAAAGAGCAATTCAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCCTCATGCACATCTTCAAGAAAAAGTCTGAAAGAGCAATTCAAA  498

seq1  GAGTCAGAGACTCACCTGATCTCACAGTTAGCAGCCCAACAAAAATATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAGACTCACCTGATCTCACAGTTAGCAGCCCAACAAAAATATCA  548

seq1  AGCTAACAACCACAGCATATACACAAATGACCAGGTCCATACCCATGTAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACAACCACAGCATATACACAAATGACCAGGTCCATACCCATGTAC  598

seq1  ACCCATGCTTCTCACTTCAGTTGCTGTGTGTTCATATGGACTATGGTTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGCTTCTCACTTCAGTTGCTGTGTGTTCATATGGACTATGGTTAG  648

seq1  TTGATTCAGTGAACTGTGTTCTCTGGTGTCCTCCAACCTCTCTGACTTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCAGTGAACTGTGTTCTCTGGTGTCCTCCAACCTCTCTGACTTAA  698

seq1  ATCTTTCCTCCAATCTTCCTCAGAATCCCCTAGTTCAGAGTTCATTTTGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCTCCAATCTTCCTCAGAATCCCCTAGTTCAGAGTTCATTTTGG  748

seq1  GGACTCCCATCACTGTCTTTTGTTTTTTGTCCTGTTTGCTTGTTGTGTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCCATCACTGTCTTTTGTTTTTTGTCCTGTTTGCTTGTTGTGTCT  798

seq1  TGGAGGTCTGCTGTTTTCTGAGGGGAGTCTGAGGAGGAGTGAATCAGAGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCTGCTGTTTTCTGAGGGGAGTCTGAGGAGGAGTGAATCAGAGG  848

seq1  GCGAGGTGAGGTAGCAGCTGAGCAGATGGGGGTGAGCAGGTTGGAGGTGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGTGAGGTAGCAGCTGAGCAGATGGGGGTGAGCAGGTTGGAGGTGA  898

seq1  TGCTGGGAAACATAGAAGGAGGGGAATCTGTGGTTGGGATGTATTACCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAAACATAGAAGGAGGGGAATCTGTGGTTGGGATGTATTACCTC  948

seq1  CTAGAACAATGTATTTTCTATTAAAAAGAGAATTATATAATAAAGTAAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACAATGTATTTTCTATTAAAAAGAGAATTATATAATAAAGTAAAA  998

seq1  ACAAACAAAAACAGCAAAAAAAATGAACAGTAAAAGAAATGGTATTTGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAACAGCAAAAAAAATGAACAGTAAAAGAAATGGTATTTGTG  1048

seq1  TGGGTGTTTAGGATGATCTGCCTTAAGACTCAGAATCTTAGCTGGAAAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTTAGGATGATCTGCCTTAAGACTCAGAATCTTAGCTGGAAAGA  1098

seq1  ATTC  1100
      ||||
seq2  ATTC  1102


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