BAC Information

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BAC

Clone NameB6Ng01-211H02
Chromosome17 (Build37)
Map Location 71,538,951 - 71,540,071
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623112, LOC623143, Dlgap1, Tgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1
Downstream geneLpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451, Wdr43, 4632412N22Rik, BC027072, Clip4, Alk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211H02.bB6Ng01-211H02.g
ACCGA029509GA029510
length1,119929
definitionB6Ng01-211H02.b B6Ng01-211H02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaagccaagagatgtagggaagggctcacagcaaatagctact
ctcctttggcccttgggccttgctgcccaaggatttacaattcatatgca
tttacttgatatccctaagtcaactttaggaatttgtttttgcttgcatt
tgctagaataagaaactgttcttaatgccagcatttataaactggtagta
gagtgcacctgctgtggagccctgggtttctcggaagcatttatgtgtac
aaggccaattgaaccagggagaggaaaaacatctgggaaaataatggcat
tgagaggccccaccattgcctgtcaggtgcctgtactgggacgaactggg
catcatccagctgttgttcccctggggacctctcattaggctgagactgg
gtcagaggaaatgtttaaaaattgtttttcaaatatggcaggtggctctg
tgtcactgttgggaaggaggagaaatggttgttggactgtttgatacacg
ctcgtttgtccgctgtgctgctgccttaacggattttcttcagtcactat
aatactaccagttcctgacttgagagtatacaccagatccccgcagaaca
gtactgagcagagggactaagcattaagtactgagcattaacctgtcagc
attagatgcagaagtgcctgtctctttctgtgttccaagtctggattcca
tcacactggtacccagctgagacctcagtaccgcacatggatggatcctg
tttgtcctccagggctttccttacagtgtcacttgactcactcagtactt
acatgtgcagataaggtccctgtgatggcaccttttattttatgtaatag
aatcaatgagtggctaagaatctttcattagacgaagtatatttagaacc
acttaaaatgtattagcttatactaattgtgcaaaaataactgactttat
cgaggcattttctcatgatacttttggcacatggttcactcggttgtctc
ttggagacctgcatgctgcccgcttggctatgtctgatactagatgaggg
tgtgtgttaagcattacctgtttggagactgctagcctaatggcgagtca
cgggcaaagggagactgaa
gaattctttgtttagctctgtaccccattttttaatagggtaaattgttt
ctctggagtccaacttcttgagttctttatatatattggatattagccct
ctattggatgtagggttggtaaatatcttttcccaatctgttggttgcct
ttttgtcctattgacagtttcctttgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattgttgatcttacagcataagccattgctgtt
ctgttcaggaaaatttcccctgtgccaagtggttccccactttctcttct
attagtttcagtgtttctggttttatgtggagggccttgatacatttgga
ctagagctatatacaaggagataagaatgaatctatgtgcattcttctac
atgctgactaccagttgaaccttcatgatttgtataaaatgctgtctttt
ttccactggatggttttagctactctgtcaaagatcaagtgtccataggt
gtgtgcatttatttctgggtctttaattctattccattgatctaactgcc
tgtctctgtaccaataccatgcagtttttatcactattgctctgtagtac
agcttgaggtcagggatggtgatttccccagaagtttcttttattgttga
aaatagttttcactatcctgggctttttgttattccaaatgaaattttgc
aaatttgtctttctcattctatgaagaattgatttggaatttttgatggg
gattgcacctgaatctctagattgcttttcagctagatggccatgtttta
tatattaaccttgccaatccatgagcatgagagatctttcccatcttctg
agatcttctccaatttccttccttcagagacttgaagttcttgatctaca
gctcttttccttgcttagagtctacagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_71538951_71540071
seq2: B6Ng01-211H02.b_46_1164

seq1  GAATTCTGAAGCCAAGAGATGTAGGGAAGGGCTCACAGCAAATAGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGCCAAGAGATGTAGGGAAGGGCTCACAGCAAATAGCTACT  50

seq1  CTCCTTTGGCCCTTGGGCCTTGCTGCCCAAGGATTTACAATTCATATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGGCCCTTGGGCCTTGCTGCCCAAGGATTTACAATTCATATGCA  100

seq1  TTTACTTGATATCCCTAAGTCAACTTTAGGAATTTGTTTTTGCTTGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTGATATCCCTAAGTCAACTTTAGGAATTTGTTTTTGCTTGCATT  150

seq1  TGCTAGAATAAGAAACTGTTCTTAATGCCAGCATTTATAAACTGGTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAATAAGAAACTGTTCTTAATGCCAGCATTTATAAACTGGTAGTA  200

seq1  GAGTGCACCTGCTGTGGAGCCCTGGGTTTCTCGGAAGCATTTATGTGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCACCTGCTGTGGAGCCCTGGGTTTCTCGGAAGCATTTATGTGTAC  250

seq1  AAGGCCAATTGAACCAGGGAGAGGAAAAACATCTGGGAAAATAATGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAATTGAACCAGGGAGAGGAAAAACATCTGGGAAAATAATGGCAT  300

seq1  TGAGAGGCCCCACCATTGCCTGTCAGGTGCCTGTACTGGGACGAACTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCCCCACCATTGCCTGTCAGGTGCCTGTACTGGGACGAACTGGG  350

seq1  CATCATCCAGCTGTTGTTCCCCTGGGGACCTCTCATTAGGCTGAGACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCAGCTGTTGTTCCCCTGGGGACCTCTCATTAGGCTGAGACTGG  400

seq1  GTCAGAGGAAATGTTTAAAAATTGTTTTTCAAATATGGCAGGTGGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGAAATGTTTAAAAATTGTTTTTCAAATATGGCAGGTGGCTCTG  450

seq1  TGTCACTGTTGGGAAGGAGGAGAAATGGTTGTTGGACTGTTTGATACACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGTTGGGAAGGAGGAGAAATGGTTGTTGGACTGTTTGATACACG  500

seq1  CTCGTTTGTCCGCTGTGCTGCTGCCTTAACGGATTTTCTTCAGTCACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTTGTCCGCTGTGCTGCTGCCTTAACGGATTTTCTTCAGTCACTAT  550

seq1  AATACTACCAGTTCCTGACTTGAGAGTATACACCAGATCCCCGCAGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTACCAGTTCCTGACTTGAGAGTATACACCAGATCCCCGCAGAACA  600

seq1  GTACTGAGCAGAGGGACTAAGCATTAAGTACTGAGCATTAACCTGTCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGCAGAGGGACTAAGCATTAAGTACTGAGCATTAACCTGTCAGC  650

seq1  ATTAGATGCAGAAGTGCCTGTCTCTTTCTGTGTTCCAAGTCTGGATTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGCAGAAGTGCCTGTCTCTTTCTGTGTTCCAAGTCTGGATTCCA  700

seq1  TCACACTGGTACCCAGCTGAGACCTCAGTACCGCACATGGATGGATCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGGTACCCAGCTGAGACCTCAGTACCGCACATGGATGGATCCTG  750

seq1  TTTGTCCTCCAGGGCTTTCCTTACAGTGTCACTTGACTCACTCAGTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTCCAGGGCTTTCCTTACAGTGTCACTTGACTCACTCAGTACTT  800

seq1  ACATGTGCAGATAAGGTCCCTGTGATGGCACCTTTTATTTTATGTAATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGCAGATAAGGTCCCTGTGATGGCACCTTTTATTTTATGTAATAG  850

seq1  AATCAATGAGTGGCTAAGAATCTTTCATTAGACGAAGTATATTTAGAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGAGTGGCTAAGAATCTTTCATTAGACGAAGTATATTTAGAACC  900

seq1  ACTTAAAATGTATTAGCTTATACTAATTGTGC-AAAATAACTGACTTTAT  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTTAAAATGTATTAGCTTATACTAATTGTGCAAAAATAACTGACTTTAT  950

seq1  CGAGGCATTTTCTCATGATACTTTTGGCACATGGTTCACTCGGTTGTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCATTTTCTCATGATACTTTTGGCACATGGTTCACTCGGTTGTCTC  1000

seq1  TTGGAGACCTGCATGCCTGCCCGCTTGGCTATGTCTGATACTAGATGAGG  1049
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGGAGACCTGCATG-CTGCCCGCTTGGCTATGTCTGATACTAGATGAGG  1049

seq1  GTGTGTGTTAAAGCA-TACCTGTTTGGAAGACTGCGAG-CTAAGGGCGAG  1097
      ||||||||| ||||| ||||||||||| ||||||| || |||| ||||||
seq2  GTGTGTGTT-AAGCATTACCTGTTTGG-AGACTGCTAGCCTAATGGCGAG  1097

seq1  TCACGGGGCAAAGGGAGACCTGAA  1121
      |||| ||||||||||||| |||||
seq2  TCAC-GGGCAAAGGGAGA-CTGAA  1119