BAC Information

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BAC

Clone NameB6Ng01-214N18
Chromosome17 (Build37)
Map Location 54,847,157 - 54,847,330
singlet/doubletsinglet
Overlap genenone
Upstream gene4932415M13Rik, Ck-ps1, EG637939, Sult1c2, LOC100043826, LOC100043471, EG668523, LOC629121, Gm324, Sult1c1, LOC100043829, EG435531, Slc5a7, LOC668529, 1700025K24Rik, Trp53-ps, LOC240117
Downstream geneEG629178, LOC100043833, LOC100043485, LOC677496, St6gal2, LOC383258, Pot1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214N18.bB6Ng01-214N18.g
ACCGA031993GA031994
length1,0081,166
definitionB6Ng01-214N18.b B6Ng01-214N18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaagaatgttgcctattcagtgacattcagaattgcctttag
tattgtaagagagatagtgaaagaaatcaggcattactatctactacata
gagttagaaatctcagggcaagcttagcaaagtaaatttagaattcttac
tatagttatgtatggcagactacatcacttattagaagaaagttccccca
cagtatcacttagaataaaagccaagtctctcccatatacaggaatttac
aatggtttaggaagtagatctagctgtggttttagagtattgcattattc
atgacaaggttagctagagcagaactccctaattagaaccatgacttggg
cgtgaaagcccttgccctgggtgtgtaaatacctcacacctggcttctga
gaatgtagctgaccttagatagagctgactttgtctcagttgttttattg
cccagttcctgcaagtctttgtgtttacattcctctgttttgtgtaagag
ccatcaagcatccggtaacctcattgtagcttgccgatgtgtcacctaac
tttcctattttcctctgtataaaaatttgatgctcaattggacaaattac
atccagattcagcacactcccttgtgtcctgtctgtttgtcaccccattc
ccgccgactctatgctcatctgtctgagactctgattggcatggattgag
acgggccacacagagagagagagagggtggggtaagaaacttgaatgcat
taacctgcagccactgtggttgtgtgtacatatcagaacaaaatcaagtc
caacaacataccagcatgaaagggtagaattcatggggctgtggtgctag
ctgaggaactattggcaactaatggctttgctaaacatttttattctgaa
ttgtagccactggcaatttgctcatatcccagtaataactccaactcaca
aacatgcacaaccctaatgaaacttcaaaggattttttttttcattacag
aaggaaga
gaattcaaggcccatactgaaacataataaacaccgtacacagcaaacca
tcaaactaaatggagagaaacttgaagaaatcccactaaaatcagggact
agaaaaggctgtccactttctcactgcctagtaaatatagtacttgaatt
cctagccagatcaattcgacaacaaaaggagatcaaggggataaaaattg
caaaggaagatttaaaatatcactattagcagatgatatgatagtatata
taagtgaccctaaaaatcccaccagggaactcctaaacctgataaacagc
ttcagtgcagtagccggatataaaattaactcaaagaaatcagtgtcctt
tctctacacaaaggataaacaggttgagaaagaaattaatgaaacaacac
ccttcataatagtcacaaataatataaaataccttgatgtgaatctaacc
aaggaagtgaaagatctgtgtaataatttcaagtctctgaagaaggagat
caaagaagatctcagaagatggaaagatctcccatgctcacgcattcact
ggcaggattaatatagtaaaaatgactatactgctgaaagcaatctacac
tttcaatgcaatccccatcaaaattccaaatcagttcttcactgagttgg
aaagggcaatttgcaaattcatctggaataacaaataacctaggatagca
aaaactcttctcaacaatcgaagaacctgtagtggaatcaccatgcctga
cctcgagctgtactacagagtaattgtgattaaaaactgcatggtactgg
ttcagtaacagacaggtagatcaatggaatagaattgaagatgaagaaat
gaaccctcacacatattgtcacttcatctttgacaaggtgttaaaaccca
tccagtggaaaaaagacagcatcttcaacacatgggtggtggctcaactg
gcagttacatgtagagatgtgaatgatccattcttatctcctgtactaag
tcagtctaatgggtcaggaactcacataaacagagaactgaacttataga
ggacatgtgagcagcttgagaattgtatcagagaaaatcatgaaagagaa
cagcatggcttggtgcgaaccagatcacaatacgaactactaatttggtc
caaacattccggattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_54847157_54847330
seq2: B6Ng01-214N18.b_124_303 (reverse)

seq1  CCATTGTAAATTCCTGTGTATGGGTGTAACTCAGCTATCTATAGTTCTAA  50
      ||||||||||||||||| |||||| |  |||  |||   | || ||||||
seq2  CCATTGTAAATTCCTGTATATGGGAGAGACTTGGCT---TTTA-TTCTAA  46

seq1  GT-AT-CTATTCTGGTTCCTCCTTAGACCACAACCTTTCTTTTTCC-TAG  97
      || || || |   ||  | | |||  |  |     | |  | | || || 
seq2  GTGATACTGTGGGGGAACTTTCTTCTAATAAGTGATGTAGTCTGCCATAC  96

seq1  ATA---ATGGTAA-ATTCCTGCAT---ATGGGAGTAGCTTGCCCTGAGAT  140
      |||   || |||| | | ||  ||    |  |   |||||||||||||||
seq2  ATAACTATAGTAAGAATTCTAAATTTACTTTGCTAAGCTTGCCCTGAGAT  146

seq1  TTCTAACTCTATGTAGTAGATAGTAATGCCTGAT  174
      ||||||||||||||||||||||||||||||||||
seq2  TTCTAACTCTATGTAGTAGATAGTAATGCCTGAT  180