BAC Information

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BAC

Clone NameB6Ng01-214O05
Chromosome17 (Build37)
Map Location 83,212,041 - 83,351,086
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
Downstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3, Haao
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214O05.bB6Ng01-214O05.g
ACCGA032015GA032016
length1,0981,097
definitionB6Ng01-214O05.b B6Ng01-214O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,212,041 - 83,213,140)(83,350,031 - 83,351,086)
sequence
gaattcaaagagaaatgtaaccatcatatcaacaatatgttttcatatat
tacactacaaggtactcaagagtttaatccactctaaattcaaaattcac
tctaaagagttcaaaaccacggagacaggattctccttcattcaatgtga
gacttacgacaaacaatcattaacagttaaaatgttttgcaagtgtctta
caaaagaaaccacatacacaccaaggaagattaggggtatgttctaggag
ttcccatgggggagaagatctatagatttatatgttactgacataaaatc
cttttgataatcacagttgttttaaaataccgtgtttcaatgtcaactgt
ttatgattagttcaggattcaaatactagcattgtctaagatcactttta
tcaaagaacatataatctcagggtaatgtgtttgacaaacctagaatgct
aacaaggagtagaagaaatagaatacatatgatgacatatggaaaatcct
gctcttaaacttggagaattttctacactgacattaatattaaaaacaaa
taaatacataggtatgtgggtaggtagtgagctagacaggcagatagaaa
agagacaggtagataatagacagatagaaaattagtcatgattctacttc
atttggtcagttaataaatattgtatttttataatataaatccaacacta
tcctaaacccttggaatatttcagtgaagcatattttagaatcaatgagg
agaaaatgaacaatgaacctaacagatgggcaaagcatgtgtgtgaagat
gtccagctcttctgggagggaagagaagaaagcattagctatggaaagga
agctggtgaggaagacagagtccactgagagaggaactagtaagctcagg
ctttgacagtgtttgttctgcggaagaacatttattcattggatatcaaa
aagatgaaaattctaaggtagaggcttggccataaatgtagttacattat
tttaatttctctcaatagaaacgaggtttttttgttgttgtgttgttgtt
agttataattaatcataggcaatatggcgtttattatgggtatttcca

gaattcagctgagaaagaggctactgagtggcagcccccgtcctcagggt
gatcagctgatctgccgattctgggagcaggtgtcccctccatgcagagc
aagcgtccccaggtggggctgcagcttccttcctttctctccctgtgagc
ggctgaatgagtgacagcttagtttccccatgagtacaaatgccacttgt
gaccaattcggtcttccaggaagagacctcgagacctgcatggtaatcta
catcatgttcagctctttttgaaaaacatgagctgggcagtggtggccca
tgcctttaattccagcacttgggaggcagaggcaggtggatttctgagtt
cgaggccagcctggtctacagggtgagttccaggacagccagggctacac
agagaaaccctgtctcgaaaaccaaagcaaagcaaagcaaagcaaagcaa
agcaaagcaaagcaaagcaaaccaaaccaaaccaaaccaaaccaaaccaa
caaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggcagac
gtgggaactgtccctttatgtgattcttgtcttgctcaaatcaattctgg
ggagtttcacaggatcctgggactctctaagaaggtcacttgtggaaatc
cctggagtttgttcttgggaagcctggatggtatcttcagagacaagaag
ggtctatttgccatataggatgaagaaacagacctcgaagtagaatcctt
cagtgccccagtactatcagtgtgaaccagagttctctgaaaaaataaaa
agaacacacctatattaaagattagaattcctgcaactgccatgagttgg
gatgttgcagatctaggacctaattatcctgattatctctagcccttcga
caaccattcatggcccttctgggtgtccgatctaatgtccttgtaagtat
cagacgaagcatctgaaatgtagtagatagcggactgctgatgtccatta
ccccaaggctaagaatgcctgtagcagagagttcttctgctgtgactgat
gttcccacccatgtggtctggaaaatgccctgatcatgccattcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83212041_83213140
seq2: B6Ng01-214O05.b_51_1148

seq1  GAATTCAAAGAGAAATGTAACCATCATATCAACAATATGTTTTCATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGAAATGTAACCATCATATCAACAATATGTTTTCATATAT  50

seq1  TACACTACAAGGTACTCAAGAGTTTAATCCACTCTAAATTCAAAATTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTACAAGGTACTCAAGAGTTTAATCCACTCTAAATTCAAAATTCAC  100

seq1  TCTAAAGAGTTCAAAACCACGGAGACAGGATTCTCCTTCATTCAATGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGAGTTCAAAACCACGGAGACAGGATTCTCCTTCATTCAATGTGA  150

seq1  GACTTACGACAAACAATCATTAACAGTTAAAATGTTTTGCAAGTGTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACGACAAACAATCATTAACAGTTAAAATGTTTTGCAAGTGTCTTA  200

seq1  CAAAAGAAACCACATACACACCAAGGAAGATTAGGGGTATGTTCTAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAACCACATACACACCAAGGAAGATTAGGGGTATGTTCTAGGAG  250

seq1  TTCCCATGGGGGAGAAGATCTATAGATTTATATGTTACTGACATAAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGGGGGAGAAGATCTATAGATTTATATGTTACTGACATAAAATC  300

seq1  CTTTTGATAATCACAGTTGTTTTAAAATACCGTGTTTCAATGTCAACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATAATCACAGTTGTTTTAAAATACCGTGTTTCAATGTCAACTGT  350

seq1  TTATGATTAGTTCAGGATTCAAATACTAGCATTGTCTAAGATCACTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTAGTTCAGGATTCAAATACTAGCATTGTCTAAGATCACTTTTA  400

seq1  TCAAAGAACATATAATCTCAGGGTAATGTGTTTGACAAACCTAGAATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACATATAATCTCAGGGTAATGTGTTTGACAAACCTAGAATGCT  450

seq1  AACAAGGAGTAGAAGAAATAGAATACATATGATGACATATGGAAAATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGAGTAGAAGAAATAGAATACATATGATGACATATGGAAAATCCT  500

seq1  GCTCTTAAACTTGGAGAATTTTCTACACTGACATTAATATTAAAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAAACTTGGAGAATTTTCTACACTGACATTAATATTAAAAACAAA  550

seq1  TAAATACATAGGTATGTGGGTAGGTAGTGAGCTAGACAGGCAGATAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACATAGGTATGTGGGTAGGTAGTGAGCTAGACAGGCAGATAGAAA  600

seq1  AGAGACAGGTAGATAATAGACAGATAGAAAATTAGTCATGATTCTACTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGTAGATAATAGACAGATAGAAAATTAGTCATGATTCTACTTC  650

seq1  ATTTGGTCAGTTAATAAATATTGTATTTTTATAATATAAATCCAACACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCAGTTAATAAATATTGTATTTTTATAATATAAATCCAACACTA  700

seq1  TCCTAAACCCTTGGAATATTTCAGTGAAGCATATTTTAGAATCAATGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACCCTTGGAATATTTCAGTGAAGCATATTTTAGAATCAATGAGG  750

seq1  AGAAAATGAACAATGAACCTAACAGATGGGCAAAGCATGTGTGTGAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGAACAATGAACCTAACAGATGGGCAAAGCATGTGTGTGAAGAT  800

seq1  GTCCAGCTCTTCTGGGAGGGAAGAGAAGAAAGCATTAGCTATGGAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTCTTCTGGGAGGGAAGAGAAGAAAGCATTAGCTATGGAAAGGA  850

seq1  AGCTGGTGAGGAAGACAGAGTCCACTGAGAGAGGAACTAGTAAGCTCAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTGAGGAAGACAGAGTCCACTGAGAGAGGAACTAGTAAGCTCAGG  900

seq1  CTTTGACAGTGTTTGTTCTGCGGAAGAACATTTATTCATTGGATAATCAA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTGACAGTGTTTGTTCTGCGGAAGAACATTTATTCATTGGAT-ATCAA  949

seq1  AAAGATGAAAATTCTAAGGTAGAGGCTTGGCCATAAATGTAAGTTACATT  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGATGAAAATTCTAAGGTAGAGGCTTGGCCATAAATGT-AGTTACATT  998

seq1  A-TTTAATTTCTCTCAATAGAAACGAGGTTTTTTTGTTGTTGTTGTTGTT  1049
      | |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTTAATTTCTCTCAATAGAAACGAGGTTTTTTTGTTGTTG-TGTTGTT  1047

seq1  GTTAGTATAT-ATTAATCATAGGCAATAATTGGC-TTTATTAT-GGTATT  1096
      |||||| ||| |||||||||||||||||  |||| |||||||| ||||||
seq2  GTTAGT-TATAATTAATCATAGGCAATA--TGGCGTTTATTATGGGTATT  1094

seq1  TTCA  1100
      | ||
seq2  TCCA  1098


seq1: chr17_83350031_83351086
seq2: B6Ng01-214O05.g_111_1162 (reverse)

seq1  CAAGAAAGGCATGAATCAAGGCATTTTCCAGA-CACATGGGTGGGAAACA  49
      |||||| |||||| |||| ||||||||||||| |||||||||||| ||||
seq2  CAAGAATGGCATG-ATCAGGGCATTTTCCAGACCACATGGGTGGG-AACA  48

seq1  CGCAGTCACAGCAG-AGAACTCTCTGCTACAGGCATTCTTAGCCTTTGGG  98
        |||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  -TCAGTCACAGCAGAAGAACTCTCTGCTACAGGCATTCTTAGCC-TTGGG  96

seq1  TTAATGGACATCAGCAGTCCGCTTATCTACTACATTTCAGATTGCTTCGT  148
       ||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  GTAATGGACATCAGCAGTCCGC-TATCTACTACATTTCAGA-TGCTTCGT  144

seq1  CTGATACTTACAAGGACATTAGATCGGACACCCAGAAGGGCCATGAATGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACTTACAAGGACATTAGATCGGACACCCAGAAGGGCCATGAATGG  194

seq1  TTGTCGAAGGGCTAGAGATAATCAGGATAATTAGGTCCTAGATCTGCAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGAAGGGCTAGAGATAATCAGGATAATTAGGTCCTAGATCTGCAAC  244

seq1  ATCCCAACTCATGGCAGTTGCAGGAATTCTAATCTTTAATATAGGTGTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAACTCATGGCAGTTGCAGGAATTCTAATCTTTAATATAGGTGTGT  294

seq1  TCTTTTTATTTTTTCAGAGAACTCTGGTTCACACTGATAGTACTGGGGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATTTTTTCAGAGAACTCTGGTTCACACTGATAGTACTGGGGCA  344

seq1  CTGAAGGATTCTACTTCGAGGTCTGTTTCTTCATCCTATATGGCAAATAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGATTCTACTTCGAGGTCTGTTTCTTCATCCTATATGGCAAATAG  394

seq1  ACCCTTCTTGTCTCTGAAGATACCATCCAGGCTTCCCAAGAACAAACTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTTGTCTCTGAAGATACCATCCAGGCTTCCCAAGAACAAACTCC  444

seq1  AGGGATTTCCACAAGTGACCTTCTTAGAGAGTCCCAGGATCCTGTGAAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTCCACAAGTGACCTTCTTAGAGAGTCCCAGGATCCTGTGAAAC  494

seq1  TCCCCAGAATTGATTTGAGCAAGACAAGAATCACATAAAGGGACAGTTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGAATTGATTTGAGCAAGACAAGAATCACATAAAGGGACAGTTCC  544

seq1  CACGTCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT  594

seq1  TTGTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGCTTTGCTTTGCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGCTTTGCTTTGCTTT  644

seq1  GCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGGTTTTCGAGACAGGGTTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGGTTTTCGAGACAGGGTTTC  694

seq1  TCTGTGTAGCCCTGGCTGTCCTGGAACTCACCCTGTAGACCAGGCTGGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCCCTGGCTGTCCTGGAACTCACCCTGTAGACCAGGCTGGCC  744

seq1  TCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAG  794

seq1  GCATGGGCCACCACTGCCCAGCTCATGTTTTTCAAAAAGAGCTGAACATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGCCACCACTGCCCAGCTCATGTTTTTCAAAAAGAGCTGAACATG  844

seq1  ATGTAGATTACCATGCAGGTCTCGAGGTCTCTTCCTGGAAGACCGAATTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATTACCATGCAGGTCTCGAGGTCTCTTCCTGGAAGACCGAATTG  894

seq1  GTCACAAGTGGCATTTGTACTCATGGGGAAACTAAGCTGTCACTCATTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAGTGGCATTTGTACTCATGGGGAAACTAAGCTGTCACTCATTCA  944

seq1  GCCGCTCACAGGGAGAGAAAGGAAGGAAGCTGCAGCCCCACCTGGGGACG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTCACAGGGAGAGAAAGGAAGGAAGCTGCAGCCCCACCTGGGGACG  994

seq1  CTTGCTCTGCATGGAGGGGACACCTGCTCCCAGAATCGGCAGATCAGCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCTGCATGGAGGGGACACCTGCTCCCAGAATCGGCAGATCAGCTG  1044

seq1  ATCACCCT  1056
      ||||||||
seq2  ATCACCCT  1052


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