BAC Information

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BAC

Clone NameB6Ng01-219I15
Chromosome17 (Build37)
Map Location 8,790,871 - 8,792,007
singlet/doubletsinglet
Overlap genenone
Upstream geneFndc1, EG634588, LOC100040748, LOC100040760, LOC667102, Tagap, Rshl2a, LOC100040822, Rnaset2a, Fgfr1op, Ccr6, LOC667114, Brp44l, Sft2d1, LOC100038858, 9630019K15Rik, EG435502, LOC433063, T2, T, LOC100040817
Downstream genePde10a, 1700010I14Rik, EG667165, EG667170, LOC666143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219I15.bB6Ng01-219I15.g
ACCGA035343GA035344
length1,1301,034
definitionB6Ng01-219I15.b B6Ng01-219I15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaattgctcccaatctgaggacacataacaactgggtaatta
caagcccggtctgcctgggtctgccctccctctgtgttggtatccttccc
ctaaattattcctctgttgtatccaattatcccccaacctccctcagttt
aggatgtgtgtaataattgcttcaacagagcacagaccaggatggttttc
agttaatctgatctgttagtcaggctcatgtctgggctcctccttcaggg
tttcaaaggacacttcacttaaacttcccagtagtatcaggagcacacag
tttatatcacctgaggtttttgtgtgtgatttgaacaaatgcaggtggtt
caagttgaccaaaggggttgtgtgcaggttgtttaaaatccagggctgca
gttgaaagtttcagtgggctgacccaacagaagaggaagcgccagcctgc
tgccacccagctctgtgactatgggagggtcacattattgtgcccctgtc
agagcctttcatggagtagacactggcaccctggcattcatgctcttggg
gtccttcattaatgatagataggagaccaattagcctcaaaaatagatat
aagtagagtggagtgaaacacaagagagacaaacatcacatgcttctcca
cctacagactccacactgaaaaaggaagaagaacgagagaaagaaagaga
agaaggaaggaaggaagggaggaacgaaggaaggaaggaaggaaggaaga
agggctggagtgatggctcagtgattaagagcactggctgctcttccaga
ggtcctgagttcaattcccagcaactacctggtggctcataaccatctgt
aatgggatccaatgccctcttctggtgtgtctgaagatagccacagtgta
ctcatatacataaaataaataaatcttttttttttaaaagaaggaaggaa
gaagaaggaaggtgtgatggtttgtatatgctggacttcaggagtgcact
attagaaggtatgaccttgttgggagtaggtgtgtcactgtggggtgggc
tttaagaccccaaccctactgcctggaagccagtatccgctacagccctt
ccgatgaaagatgagtactcttagctcctc
gaattctttatatatattgatattagccctctatcagatatagaattggt
aaatatcttttcttaatctgttagttgccgttttgttctattgaacgtgt
cctttgccttacagaaactttgcaattttatgaggttccatttgttgatt
cttgatcttagagcataagccatcagtgttttgttcaggaactttccccc
tgtacccatgtgttcaagactttcccccactttctattagattaagtgta
tctggttttatgtggaggtccttgatccacttggacttgagctttataca
aggagataagaatggatcaatttgcattcttctacttgttgactgccagt
tgaactagcaccatttgttgaaaatggtgtcttttttccactggatggtt
ttagctcctttgtcaaagatcaagtgcctgtaggtgtgtgggatcatttc
tggctctttaattctattccattgatctacctgcctgtcaccataccaat
accatgcagtttttaatcactattgctatgtagtacagcgtgatcatggt
gaatgatcatttggaggtgttcttgggttcggtttgagagaagtttatgg
agtatttttgcgtcaatattcataagggaaattggtctgaggttctcttt
ctttgttgggtctttgtgtggttttggtatctgcatcacagtggcttcat
aggatgaatttggtagtgtttcttttctttctagtttgtggaatcgtttg
aagagtgttcgtattaggtcttctctgaaggtctgatagaattctgcact
aaaaccttctggtcctgggctttttttgttgttgggagattttaatgact
gcttctacttctttaggggttatgggactgtttagagggtttatctgatc
tggatttaactttagtatttggtatctgtctagaaacttttccatttcat
ctagattttcaagttcattgatataggctttgtagtagatctggcgattt
tggcatctccccagctctgtgttacatcccgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_8790871_8792007
seq2: B6Ng01-219I15.b_42_1171

seq1  GAATTCTGTAATTGCTCCCAATCTGAGGACACATAACAACTGGGTAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATTGCTCCCAATCTGAGGACACATAACAACTGGGTAATTA  50

seq1  CAAGCCCGGTCTGCCTGGGTCTGCCCTCCCTCTGTGTTGGTATCCTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCGGTCTGCCTGGGTCTGCCCTCCCTCTGTGTTGGTATCCTTCCC  100

seq1  CTAAATTATTCCTCTGTTGTATCCAATTATCCCCCAACCTCCCTCAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTATTCCTCTGTTGTATCCAATTATCCCCCAACCTCCCTCAGTTT  150

seq1  AGGATGTGTGTAATAATTGCTTCAACAGAGCACAGACCAGGATGGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGTGTAATAATTGCTTCAACAGAGCACAGACCAGGATGGTTTTC  200

seq1  AGTTAATCTGATCTGTTAGTCAGGCTCATGTCTGGGCTCCTCCTTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATCTGATCTGTTAGTCAGGCTCATGTCTGGGCTCCTCCTTCAGGG  250

seq1  TTTCAAAGGACACTTCACTTAAACTTCCCAGTAGTATCAGGAGCACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGGACACTTCACTTAAACTTCCCAGTAGTATCAGGAGCACACAG  300

seq1  TTTATATCACCTGAGGTTTTTGTGTGTGATTTGAACAAATGCAGGTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCACCTGAGGTTTTTGTGTGTGATTTGAACAAATGCAGGTGGTT  350

seq1  CAAGTTGACCAAAGGGGTTGTGTGCAGGTTGTTTAAAATCCAGGGCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGACCAAAGGGGTTGTGTGCAGGTTGTTTAAAATCCAGGGCTGCA  400

seq1  GTTGAAAGTTTCAGTGGGCTGACCCAACAGAAGAGGAAGCGCCAGCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAGTTTCAGTGGGCTGACCCAACAGAAGAGGAAGCGCCAGCCTGC  450

seq1  TGCCACCCAGCTCTGTGACTATGGGAGGGTCACATTATTGTGCCCCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCCAGCTCTGTGACTATGGGAGGGTCACATTATTGTGCCCCTGTC  500

seq1  AGAGCCTTTCATGGAGTAGACACTGGCACCCTGGCATTCATGCTCTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTTCATGGAGTAGACACTGGCACCCTGGCATTCATGCTCTTGGG  550

seq1  GTCCTTCATTAATGATAGATAGGAGACCAATTAGCCTCAAAAATAGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCATTAATGATAGATAGGAGACCAATTAGCCTCAAAAATAGATAT  600

seq1  AAGTAGAGTGGAGTGAAACACAAGAGAGACAAACATCACATGCTTCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGTGGAGTGAAACACAAGAGAGACAAACATCACATGCTTCTCCA  650

seq1  CCTACAGACTCCACACTGAAAAAGGAAGAAGAACGAGAGAAAGAAAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGACTCCACACTGAAAAAGGAAGAAGAACGAGAGAAAGAAAGAGA  700

seq1  AGAAGGAAGGAAGGAAGGGAGGAACGAAGGAAGGAAGGAAGGAAGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGGAAGGAAGGGAGGAACGAAGGAAGGAAGGAAGGAAGGAAGA  750

seq1  AGGGCTGGAGTGATGGCTCAGTGATTAAGAGCACTGGCTGCTCTTCCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGGAGTGATGGCTCAGTGATTAAGAGCACTGGCTGCTCTTCCAGA  800

seq1  GGTCCTGAGTTCAATTCCCAGCAACTACCTGGTGGCTCATAACCATCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGAGTTCAATTCCCAGCAACTACCTGGTGGCTCATAACCATCTGT  850

seq1  AATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAGCCACAGTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAGCCACAGTGTA  900

seq1  CTCATATACATAAAATAAATAAATCTTTTTTTTTTAAAAGGAAGGAAGGA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCATATACATAAAATAAATAAATCTTTTTTTTTTAAAA-GAAGGAAGGA  949

seq1  AGGAAGGAAGGAAGGTGTGATGGTTTGTATATGCTGGACTCAGGGAGTGG  1000
      ||  | ||||||||||||||||||||||||||||||||||   ||||| |
seq2  AG--AAGAAGGAAGGTGTGATGGTTTGTATATGCTGGACTTCAGGAGT-G  996

seq1  CACTATTAGAAGGTATGACCTTGTTGGGAGTAGGTGTGTCACTGTGGGGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACTATTAGAAGGTATGACCTTGTTGGGAGTAGGTGTGTCACTGT-GGGG  1045

seq1  TGGGCTTTAAGACCCCAACCCTAGCTGCCTGGAAGCCAGTATTCTGCTAG  1100
      ||||||||||||||||||||||| ||||||||||||||||| || |||| 
seq2  TGGGCTTTAAGACCCCAACCCTA-CTGCCTGGAAGCCAGTA-TCCGCTA-  1092

seq1  CAG-CCTTCAGATG-AAGATGTAGAACTCTTAGCTCCTC  1137
      ||| ||||| |||| |||||| || ||||||||||||||
seq2  CAGCCCTTCCGATGAAAGATG-AGTACTCTTAGCTCCTC  1130