BAC Information

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BAC

Clone NameB6Ng01-226K21
Chromosome17 (Build37)
Map Location 95,271,960 - 95,272,645
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226K21.bB6Ng01-226K21.g
ACCGA040552GA040553
length1,0531,193
definitionB6Ng01-226K21.b B6Ng01-226K21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaggttttttactgaagttcctacaaagaattatacattcact
ccagttctgtattcaccttctagaatcatgaagtgcccaagtttaagctg
taacactaatattaaaagggaatgcatgtttaaacagttacaaatggaca
tatgaaaatattagcaatgtaaatgttgatcctaattgttgataagaaac
atagggcaggagagatggctcagcagtgaagagctcttgttgctcttgca
agtaattgggctcaattgccagtacttacaagggtgctcacaactatcga
tttctccaaattaaggaagtctgaagccatcttctgactactatgaggac
caggcacacatgagatgcatattcatgcatacaggcaaaatactcatatt
tattttaaaaaatcaaaacaaatacaacaggtaggaagaatgtcatgcat
ctgcaattcaatgactcagaaagctcaggcagtaaaactcaggcagtaaa
acccaggcagtaaaacccaggcagtattaatgtcatgaatacatgccatc
ctgagaaacagaatattctctccgccaaatttcaaaattcacaatgtgga
ttcaacacagcaggatatgcttgacatgtatcaaaacctacattctaggc
caatcagtcaataatataaaaacaaacaaacaaaaagccaggcatgttgg
cccacattcaatcccagcactttggagacagtcaggtggacctgattaag
tgtgatgcctgcatgttctacatacccattgtcaggacagccagggatac
acagagaaactttgtcttcaaaaacaaaaccaacaaaattaaaaatataa
aaacaccaggctcacaaaggtagcttagcactgaatagcaattgtttcta
ctgcatcttatatgatttagggatagtctataatggtgaatgtatgatag
catgagaaggaagctcactgatcagtttcaaccaccacacacacacacaa
acacacacacacacacacaaatcagcaatgagttgagtctataagacatt
caa

gaattccaactcaattcttcaacgaattagaaggggcaatcggcagattc
atctggaataacaaaaaaccgaggaaagcaaaaactcttctcaaggataa
aagaacctctggtggaatcaccatgccggacctaaaactgtactacagag
caattgtgatcaaaactgcatggtactggtatagtgacagacaagtagac
caatggaacagaattgaagacccagagatgaatacacacacctatggtca
cttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagca
ttttcaacaaatggtgctggcacaactggcggttatcatgcagaagaatg
cgaattgatccatttctatctccttgtactaaggtcaaatctaagttgat
taaggaactccacataaaaccagagacactgaaacttatagaggagaaag
tagggaaaagcctcgaagatatgggtacaggggaaaaattcctgaataga
acagcaatggcttgtgctgtaagatcaagaatcgataaatgggacctcat
aaaattgcaaagcttctgcaaagcaaaagacaccgtcaataagacaaaaa
ggccaccaacagattgggaaaggatctttacctatcccaaatcggatagg
ggactaatatccaatatatataaagaactcaagaaggtggactccagaaa
atcaaataaccccattaaaaaatggggctcagagctgaacaaagaattct
cacctgaggaataccgaatggcagagaagcacctgaaaaaatgttcaaca
tccttaatcatcagggaaatgcaaatcaaaacaacactgagattccactt
cactccagtcagaatggctaagatcaaaaactcaggtgacagcagatgct
ggcgaggatgtggagaaaggggaacactcctccattgttggtgggattgc
aagcttgtacaaccactctggaaatcagtctggcggttcctcaaaaattg
gacatagtactaccggaggatcccgcatacctcctcctgggcatatatcc
agaagatgttcccacgggtaagaggacacatgctcactatgttcatagca
gcttggctataatagcggagctgggaaggctgatgccctccacgaggatt
gatacggaaatgttggctacattaacacaaatgggcgaatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_95271960_95272645
seq2: B6Ng01-226K21.b_244_772 (reverse)

seq1  CTCCAGAGTGCTGGGATTAAATGTGGGCCAACATGCCTAGCTTTTTCTTT  50
      ||||| |||||||||||| ||||||||||||||||||| ||||||| |||
seq2  CTCCAAAGTGCTGGGATTGAATGTGGGCCAACATGCCTGGCTTTTTGTTT  50

seq1  GTTTGTTTGTTTATTGGTTTTTATATTATTGGATGATGGGCCTGGAATCT  100
      ||||            |||||||||||||||  |||| ||||| |||| |
seq2  GTTT------------GTTTTTATATTATTGACTGATTGGCCTAGAATGT  88

seq1  AGGTTTTGGTATATGTCAAGCAT---GTGTTGTGTTGATCTTCATCCACA  147
      |||||||| || |||||||||||    || ||||||||     |||||||
seq2  AGGTTTTGATACATGTCAAGCATATCCTGCTGTGTTGA-----ATCCACA  133

seq1  TTGTGAATTTTGAAATTTGGCAGAGAGAATATTCTGTTTCTCAGTATGGC  197
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TTGTGAATTTTGAAATTTGGCGGAGAGAATATTCTGTTTCTCAGGATGGC  183

seq1  ATGTATTCATGACATTAATACTGCCTGAGGGGCTGGAGAGATGGCTCAGC  247
      |||||||||||||||||||||||||||                       
seq2  ATGTATTCATGACATTAATACTGCCTG-----------------------  210

seq1  AGTTAAGAGCACTGACTGCTCTTCCAAAGGTTCTGAGTTCAATTCCTAGC  297
       |||        | |||||             ||| |||           
seq2  GGTT--------TTACTGC-------------CTGGGTT-----------  228

seq1  AACCACATGGTAGCTCACAACCATCTGTAATGAGATCAGATGCCCTCTTC  347
                    | ||                      |||       
seq2  --------------TTAC----------------------TGC-------  235

seq1  TGGTGTATCTGAAAACAGCTACAGCGTACTTACATATCATAAATAAAATA  397
              ||||             ||                       
seq2  --------CTGA-------------GT-----------------------  241

seq1  AACCTTAAAATAAAAAATACTGCCTGAGCTTTCTGAGTCATTGGATTGCT  447
          ||           |||||||||||||||||||||||||| ||||| 
seq2  ----TT-----------TACTGCCTGAGCTTTCTGAGTCATTGAATTGCA  276

seq1  GGTGCAGATCATTCTTCCTACCTGTTGTGTTTGTTTTGATTTTTT--TAT  495
      | ||||   ||||||||||||||||||| ||||||||||||||||   ||
seq2  GATGCATGACATTCTTCCTACCTGTTGTATTTGTTTTGATTTTTTAAAAT  326

seq1  GAACATGAGTATTTTGCCTGTATGCATGAATATGTACATCCTGTATGCCT  545
       || |||||||||||||||||||||||||||||| |  || ||| |||||
seq2  AAATATGAGTATTTTGCCTGTATGCATGAATATGCATCTCATGTGTGCCT  376

seq1  GGTCCCCATAGAAGTCAGAAGATGGCTTCAGAATTCCTGAATTTGGAGTA  595
      ||||| ||||| |||||||||||||||||||| ||||| ||||||||| |
seq2  GGTCCTCATAGTAGTCAGAAGATGGCTTCAGACTTCCTTAATTTGGAGAA  426

seq1  ATGGATAGTTGTGA----------AACAATTGGCAATTGAGCCCAATTAT  635
      || |||||||||||          ||  | ||||||||||||||||||| 
seq2  ATCGATAGTTGTGAGCACCCTTGTAAGTACTGGCAATTGAGCCCAATTAC  476

seq1  TTGCAAGACCAACAAGAGCTCTTGACTGCTGAGCCA--TCTCCTGTCCTA  683
      |||||||| |||||||||||||| ||||||||||||  ||||||| ||||
seq2  TTGCAAGAGCAACAAGAGCTCTTCACTGCTGAGCCATCTCTCCTGCCCTA  526

seq1  TGT  686
      |||
seq2  TGT  529


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