BAC Information

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BAC

Clone NameB6Ng01-229E13
Chromosome17 (Build37)
Map Location 90,352,709 - 90,353,577
singlet/doubletsinglet
Overlap genenone
Upstream geneFshr, LOC100043904, LOC100043906
Downstream geneNrxn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229E13.bB6Ng01-229E13.g
ACCGA042475GA042476
length5111,041
definitionB6Ng01-229E13.b B6Ng01-229E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtattattatcttcctttctaatttgttgatttcagccctgagttag
attatcccatgcctttcacttttcttgagtgtgttagtttctttttgttt
cagagttttagcggtgctggtaaatcgctaataagaaatctctccaagta
agttatgaagtgctataaactttcctgttatgactacattttatttctca
taagtttgggcatattgtacattcattttcattgaattctacaaaatctt
gaatttatttattttttctttgactcagtgattaagtgatcagcagtttt
aaattcatattattttaatgatggtagtggtagtgtgtatttgtgtatgt
atgtgttcacctccatccgtctcaagctataaggtgtggccattatgtgt
aatctgcttgtcacttcagtgacatgaagcatccttttaaaacttcagcg
actttgtcatttgtatttgctttattcagaatgcaaatttttatttaact
tttcctatgta

gaattctattagtccttcaaagaagacctactaccaatactctgcaaact
actccacaaatagaaacagaaggaatgcacccaattcattctatgaagcc
acaattatacttaaatctaaaccacacaaagacccagcaaagaaatagaa
actatagactcaaggtttaccaacaggatatgagatgaaacagaatctca
gacattgaaaaacaataaaagaaatgaatacatcaagcaaagaaaataat
aaatctaaaaaattcctgacacaaacctccaggaaatctaggacactatg
aacagatcaagccttaggataaagtgtgaacaaggtagcctggtgggtct
gggccaaggtatacaagtaagaggttatgacatgcaacagagccaacaca
agaagtttattggaggaagagagaaagccaaaggctatcctcagagttga
gaaatgttagagatagagatagacagacagaaatagagaaagacagacag
agaccagtagacagaacgagagagagagagagagagagagagagagagag
agagagagagagagagagagctcaaactaaacaaaggaaaagctgtaatg
tccagaaagatcttttaaagggtacacatgttgcatagaaaaaatatgca
gctcattgagacaggagaaatgcaccaaccctaaagagataaaaccataa
agagataaaaaactcacactctagcacattgaccactttaagtgaaatga
attattttccaaaagttaagtcaagaccagataaacatttaaacagaccc
ataccctgtagtaatataaaagcagtcattaaaagatccactaaccaaaa
ccacccaggggcatctgggttttagtagagattctaccagacgttcagag
aagagctaatgttaatactccctaaattattccgcaagtagaacaaaagt
agcattgaccaatttattttatggaggcccatttaccctgatatctaaat
cacataacactcaacaaagaaaaggattatgggaacactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_90352709_90353577
seq2: B6Ng01-229E13.g_239_1107 (reverse)

seq1  GCAGTTGTTCCATAATTCCTTTTCTTTGTTGAGTGTTTATGTGATTTAGA  50
      |||||  | |||||| ||||||||||||||||||| ||||||||||||||
seq2  GCAGTGTTCCCATAA-TCCTTTTCTTTGTTGAGTG-TTATGTGATTTAGA  48

seq1  TATCAGGGTAAATGGGGCCTCATAAAATAAATTGGTCAATGCTACTTTTG  100
      |||||||||||||||| |  ||||||||||||||||||||||||||||||
seq2  TATCAGGGTAAATGGGCCTCCATAAAATAAATTGGTCAATGCTACTTTTG  98

seq1  TTCTACTTTGCGGAATAATTTAGGGAGTATTAACATTAGCTCTTCTCTGA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAC-TTGCGGAATAATTTAGGGAGTATTAACATTAGCTCTTCTCTGA  147

seq1  ACGTCTGGTAGAAATCTCTACTAAAA-CCAGATGCCCCTGGGTGGTTTTG  199
      ||||||||||| |||||||||||||| |||||||||||||||||||||||
seq2  ACGTCTGGTAG-AATCTCTACTAAAACCCAGATGCCCCTGGGTGGTTTTG  196

seq1  GTTAGTGGATCTTTTAATGACTGCTTTTATATTACTACAGGGTATGGGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGGATCTTTTAATGACTGCTTTTATATTACTACAGGGTATGGGTC  246

seq1  TGTTTAAATTGTTTATCTGGTCTTGACTTAACTTTTGGAAAATAATTCAT  299
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAA-TGTTTATCTGGTCTTGACTTAACTTTTGGAAAATAATTCAT  295

seq1  TTCACTTAAAGTGGTCAATGTGCTAGAGTGTGAGTTTTTTATCTCTTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTAAAGTGGTCAATGTGCTAGAGTGTGAGTTTTTTATCTCTTTAT  345

seq1  GGTTTTATCTCTTTAGGGTTGGTGCATTTCTCCTGTCTCAATGAGCTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATCTCTTTAGGGTTGGTGCATTTCTCCTGTCTCAATGAGCTGCA  395

seq1  TATTTTTTCTATGCAACATGTGTACCCTTTAAAAGATCTTTCTGGACATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTCTATGCAACATGTGTACCCTTTAAAAGATCTTTCTGGACATT  445

seq1  ACAGCTTTTCCTTTGTTTAGTTTGAG----CTCTCTCTCTCTCTCTCTCT  495
      ||||||||||||||||||||||||||    ||||||||||||||||||||
seq2  ACAGCTTTTCCTTTGTTTAGTTTGAGCTCTCTCTCTCTCTCTCTCTCTCT  495

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTGTCTACTGGTCTCTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTGTCTACTGGTCTCTGT  545

seq1  CTGTCTTTCTCTATTTCTGTCTGTCTATCTCTATCTCTAACATTTCTCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCTCTATTTCTGTCTGTCTATCTCTATCTCTAACATTTCTCAA  595

seq1  CTCTGAGGATAGCCTTTGGCTTTCTCTCTTCCTCCAATAAACTTCTTGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGATAGCCTTTGGCTTTCTCTCTTCCTCCAATAAACTTCTTGTG  645

seq1  TTGGCTCTGTTGCATGTCATAACCTCTTACTTGTATACCTTGGCCCAGAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCTGTTGCATGTCATAACCTCTTACTTGTATACCTTGGCCCAGAC  695

seq1  CCACCAGGCTACCTTGTTCACACTTTATCCTAAGGCTTGATCTGTTCATA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGGCTACCTTGTTCACACTTTATCCTAAGGCTTGATCTGTTCATA  745

seq1  GTGTCCTAGATTTCCTGGAGGTTTGTGTCAGGAATTTTTTAGATTTATTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTAGATTTCCTGGAGGTTTGTGTCAGGAATTTTTTAGATTTATTA  795

seq1  TTTTCTTTGCTTGATGTATTCATTTCTTTTATTGTTTTTCAATGTCTGAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGCTTGATGTATTCATTTCTTTTATTGTTTTTCAATGTCTGAG  845

seq1  ATTCTGTTTCATCTCATATCCTGT  869
      ||||||||||||||||||||||||
seq2  ATTCTGTTTCATCTCATATCCTGT  869


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