BAC Information

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BAC

Clone NameB6Ng01-232G18
Chromosome17 (Build37)
Map Location 61,378,331 - 61,513,396
singlet/doubletdoublet
Overlap geneLOC433129
Upstream geneLOC100043549
Downstream geneEG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232G18.bB6Ng01-232G18.g
ACCGA044765GA044766
length1,0951,184
definitionB6Ng01-232G18.b B6Ng01-232G18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,512,301 - 61,513,396)(61,378,331 - 61,379,511)
sequence
gaattcctgtaaatccatgcaatttcaactgcatggatccaaatgagtgt
cctggaatgaccatgataatggcttcaaattgtcaggtagctttctccat
taaccaaaaaagttatgttaacaatacctaattaaagccactgtttgtgt
atactaatattccctgagtcttcctttttcaaagtgttttggtaactata
gtgttgccttaggaatgttttagatttagcaagggaatattgaattgtag
atatatttaacttaagtttaaaaggacaaatatacatggcaactatttct
tgtatgaatgacaaatttaccattaggttttgtgtctacagaaatccttt
ggtttatagtcttcacacagaggattttgtggtactctggcatgaacctg
tcctgtggtgcatggaggagggacatggggagaaaaggagaaataaatat
agccaaaaattagttggtgaaaattcttcccaacatcaaatatataaaat
gcattccttatccacacctagtcaaaacagaagttcttcctgcagtgcaa
agcattacaattcctctgtgtgatttttgatagaaaaaatttcacaatta
ctacagtacttattcatatgacccacatctgaggctggctgaatatagca
tatacttttgtgcatggcttaacataatttaaatattccaactagtgatt
gtaaaagatgtttagattaagtgtagtaggaaaagttagtccatctttct
tgtccctaaatagatagaaaaactatcaaattgatatgtattgattcatc
tgaaaaatcagtcagatagcatgcagccctaaacagaaggagaatataaa
aggaaagcaaagaaaagtttatgaaaacattgtgacatatttttttaaaa
ttatgttcactttaatttgtttcatttgttaatttgcttgtaatttattt
gggggtacagagtgctctggtgtagccagatatacgccagatgacaatct
gagggattcaattctctgtttacacatgtggcttctacaaatggattcag
gtcatcaggcttagtagcatttactttatctgttggagcatctgg
gaattcactttgtagaccaggctggcctcgtcaaaattacatcttgtcct
tactctatccccatccaaaaagacctgattcctcttgtctcctttccaac
ccagaagttccgcctacttgcccagtgattggcccttttattcattaagg
aattggttaacaagaacagcaccattcccacccacaagatagaaaataaa
taaataaataaataaataaataaatgacacccaaaacaaaacaaagccat
aaaccaaaaccgcgacacattttccattattactttctattgaatgtcct
tagaggttagcacactgaagacttggtccttggtgaagcaatcctcagag
gcagggctcttcaagagtgctgtgctaacaaggtcccaaacccatgaaga
tattaatccattggaagtgttctgaatctcgaggtcaattggaaaatgac
agaaaattgaaggtgggaccacactgacaagagataggttctctgaggcc
tgctttggagttcatagattatccttatatctgttccagtatactatttt
catcctgatgttcttcataacctatgtccaaaagcaacgagataaaagat
catattctgaaacctctgaaacagtaagccacaatgccagctgtccttta
aatgacttactcaggtatgttgtttccaagattaaaagtgtacacatcta
cctaattgctttcttttctttaacctttttctctttcaatgtataaaact
tcccagtgcctcccggatcccccatggatttttgtcataaacattatcta
gccaaaaatttctgccacatttccccttccttaatggtgacattttcctg
cacaattataccatttttagcttctcctattattacatagatgtctttga
tatgtatttcttatatctctttctttcataactacctttgacattccaat
atatttccgagaatcctgttattactgttttttttttttcagggactgct
gttctgagttagtggttatgaaagtgttcttacattatttcttacaactt
attacaactattgttttatggaataaagtctctaatatcaacccttccac
atggtttgacttttttaggaataaaggcattcttggcttacagtccatac
tgacttagccacggaacctatattcacttaatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61512301_61513396
seq2: B6Ng01-232G18.b_43_1137 (reverse)

seq1  CCAGATGCTCCAACAGATAAAGGTAATTGCTACTAAGCCTGATGACCTGA  50
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  CCAGATGCTCCAACAGATAAA-GTAAATGCTACTAAGCCTGATGACCTGA  49

seq1  ATCCATTTGTAGGAGCCACATGTGTAAACAGAGAATTGAATCCCTCAGAT  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTGTAGAAGCCACATGTGTAAACAGAGAATTGAATCCCTCAGAT  99

seq1  TGTCATCTGGCGTATATCTGGCTACACCAGAGCACTCTGTACCCCCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTGGCGTATATCTGGCTACACCAGAGCACTCTGTACCCCCAAAT  149

seq1  AAATTACAAGCAAATTAACAAATGAAACAAATTAAAGTGAACATAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAAGCAAATTAACAAATGAAACAAATTAAAGTGAACATAATTTT  199

seq1  AAAAAAATATGTCACAATGTTTTCATAAACTTTTCTTTGCTTTCCTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATATGTCACAATGTTTTCATAAACTTTTCTTTGCTTTCCTTTTA  249

seq1  TATTCTCCTTCTGTTTAGGGCTGCATGCTATCTGACTGATTTTTCAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCCTTCTGTTTAGGGCTGCATGCTATCTGACTGATTTTTCAGATG  299

seq1  AATCAATACATATCAATTTGATAGTTTTTCTATCTATTTAGGGACAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATACATATCAATTTGATAGTTTTTCTATCTATTTAGGGACAAGAA  349

seq1  AGATGGACTAACTTTTCCTACTACACTTAATCTAAACATCTTTTACAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGACTAACTTTTCCTACTACACTTAATCTAAACATCTTTTACAATC  399

seq1  ACTAGTTGGAATATTTAAATTATGTTAAGCCATGCACAAAAGTATATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTGGAATATTTAAATTATGTTAAGCCATGCACAAAAGTATATGCT  449

seq1  ATATTCAGCCAGCCTCAGATGTGGGTCATATGAATAAGTACTGTAGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGCCAGCCTCAGATGTGGGTCATATGAATAAGTACTGTAGTAAT  499

seq1  TGTGAAATTTTTTCTATCAAAAATCACACAGAGGAATTGTAATGCTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATTTTTTCTATCAAAAATCACACAGAGGAATTGTAATGCTTTGC  549

seq1  ACTGCAGGAAGAACTTCTGTTTTGACTAGGTGTGGATAAGGAATGCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGGAAGAACTTCTGTTTTGACTAGGTGTGGATAAGGAATGCATTT  599

seq1  TATATATTTGATGTTGGGAAGAATTTTCACCAACTAATTTTTGGCTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTGATGTTGGGAAGAATTTTCACCAACTAATTTTTGGCTATAT  649

seq1  TTATTTCTCCTTTTCTCCCCATGTCCCTCCTCCATGCACCACAGGACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTCCTTTTCTCCCCATGTCCCTCCTCCATGCACCACAGGACAGG  699

seq1  TTCATGCCAGAGTACCACAAAATCCTCTGTGTGAAGACTATAAACCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCCAGAGTACCACAAAATCCTCTGTGTGAAGACTATAAACCAAAG  749

seq1  GATTTCTGTAGACACAAAACCTAATGGTAAATTTGTCATTCATACAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGTAGACACAAAACCTAATGGTAAATTTGTCATTCATACAAGAA  799

seq1  ATAGTTGCCATGTATATTTGTCCTTTTAAACTTAAGTTAAATATATCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGCCATGTATATTTGTCCTTTTAAACTTAAGTTAAATATATCTAC  849

seq1  AATTCAATATTCCCTTGCTAAATCTAAAACATTCCTAAGGCAACACTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATATTCCCTTGCTAAATCTAAAACATTCCTAAGGCAACACTATA  899

seq1  GTTACCAAAACACTTTGAAAAAGGAAGACTCAGGGAATATTAGTATACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAAAACACTTTGAAAAAGGAAGACTCAGGGAATATTAGTATACAC  949

seq1  AAACAGTGGCTTTAATTAGGTATTGTTAACATAACTTTTTTGGTTAATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGGCTTTAATTAGGTATTGTTAACATAACTTTTTTGGTTAATGG  999

seq1  AGAAAGCTACCTGACAATTTGAAGCCATTATCATGGTCATTCCAGGACAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTACCTGACAATTTGAAGCCATTATCATGGTCATTCCAGGACAC  1049

seq1  TCATTTGGATCCATGCAGTTGAAATTGCATGGATTTACAGGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGATCCATGCAGTTGAAATTGCATGGATTTACAGGAATTC  1095

seq1: chr17_61378331_61379511
seq2: B6Ng01-232G18.g_67_1250

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGTCAAAATTACATCTTGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGTCAAAATTACATCTTGTCCT  50

seq1  TACTCTATCCCCATCCAAAAAGACCTGATTCCTCTTGTCTCCTTTCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTATCCCCATCCAAAAAGACCTGATTCCTCTTGTCTCCTTTCCAAC  100

seq1  CCAGAAGTTCCGCCTACTTGCCCAGTGATTGGCCCTTTTATTCATTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTTCCGCCTACTTGCCCAGTGATTGGCCCTTTTATTCATTAAGG  150

seq1  AATTGGTTAACAAGAACAGCACCATTCCCACCCACAAGATAGAAAATAAA  200
      |||||||||||||||||||||||||||||||||||||||||||    |||
seq2  AATTGGTTAACAAGAACAGCACCATTCCCACCCACAAGATAGA----AAA  196

seq1  TAAATAAATAAATAAATAAATAAATAAATGACACCCAAAACAAAACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATAAATAAATAAATAAATGACACCCAAAACAAAACAAAG  246

seq1  CCATAAACCAAAACCGCGACACATTTTCCATTATTACTTTCTATTGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAACCAAAACCGCGACACATTTTCCATTATTACTTTCTATTGAATG  296

seq1  TCCTTAGAGGTTAGCACACTGAAGACTTGGTCCTTGGTGAAGCAATCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAGGTTAGCACACTGAAGACTTGGTCCTTGGTGAAGCAATCCTC  346

seq1  AGAGGCAGGGCTCTTCAAGAGTGCTGTGCTAACAAGGTCCCAAACCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGGCTCTTCAAGAGTGCTGTGCTAACAAGGTCCCAAACCCATG  396

seq1  AAGATATTAATCCATTGGAAGTGTTCTGAATCTCGAGGTCAATTGGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTAATCCATTGGAAGTGTTCTGAATCTCGAGGTCAATTGGAAAA  446

seq1  TGACAGAAAATTGAAGGTGGGACCACACTGACAAGAGATAGGTTCTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAAATTGAAGGTGGGACCACACTGACAAGAGATAGGTTCTCTGA  496

seq1  GGCCTGCTTTGGAGTTCATAGATTATCCTTATATCTGTTCCAGTATACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCTTTGGAGTTCATAGATTATCCTTATATCTGTTCCAGTATACTA  546

seq1  TTTTCATCCTGATGTTCTTCATAACCTATGTCCAAAAGCAACGAGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCCTGATGTTCTTCATAACCTATGTCCAAAAGCAACGAGATAAA  596

seq1  AGATCATATTCTGAAACCTCTGAAACAGTAAGCCACAATGCCAGCTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATATTCTGAAACCTCTGAAACAGTAAGCCACAATGCCAGCTGTCC  646

seq1  TTTAAATGACTTACTCAGGTATGTTGTTTCCAAGATTAAAAGTGTACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGACTTACTCAGGTATGTTGTTTCCAAGATTAAAAGTGTACACA  696

seq1  TCTACCTAATTGCTTTCTTTTCTTTAACCTTTTTCTCTTTCAATGTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTAATTGCTTTCTTTTCTTTAACCTTTTTCTCTTTCAATGTATAA  746

seq1  AACTTCCCAGTGCCTCCCGGATCCCCCATGGATTTTTGTCATAAACATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCAGTGCCTCCCGGATCCCCCATGGATTTTTGTCATAAACATTA  796

seq1  TCTAGCCAAAAATTTCTGCCACATTTCCCCTTCCTTAATGGTGACATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCAAAAATTTCTGCCACATTTCCCCTTCCTTAATGGTGACATTTT  846

seq1  CCTGCACAATTATACCATTTTTAGCTTCTCCTATTATTACATAGATGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACAATTATACCATTTTTAGCTTCTCCTATTATTACATAGATGTCT  896

seq1  TTGATATGTTATTTCTTATTATCTCTTTCTTTCAATAACTACCTTTGACA  950
      |||||||| ||||||||| |||||||||||||| ||||||||||||||||
seq2  TTGATATG-TATTTCTTA-TATCTCTTTCTTTC-ATAACTACCTTTGACA  943

seq1  TTCC-ATATATTTCCGAGAATCCTGTTATTACTG-TTTTTTTTTTTCA-G  997
      |||| ||||||||||||||||||||||||||||| ||||||||||||| |
seq2  TTCCAATATATTTCCGAGAATCCTGTTATTACTGTTTTTTTTTTTTCAGG  993

seq1  GACTGCTG-TCTGAGTTAGTG--TATGAAAAGTGT--CTACATTATT--C  1040
      |||||||| ||||||||||||  |||| |||||||   |||||||||   
seq2  GACTGCTGTTCTGAGTTAGTGGTTATG-AAAGTGTTCTTACATTATTTCT  1042

seq1  TACAAC-TATTACAACTAT--GTTTATTGAATTATATTTCTTCTATATCA  1087
      |||||| ||||||||||||   ||||| |||| |  | |||   ||||||
seq2  TACAACTTATTACAACTATTGTTTTATGGAATAAAGTCTCT--AATATCA  1090

seq1  ACC--TTCACAT-GTTTAATTTTTTTAAGGAATAAAAGCA-TCTT-GCTA  1132
      |||  | ||||| |||| | |||||| ||||||||| ||| |||| ||| 
seq2  ACCCTTCCACATGGTTTGACTTTTTT-AGGAATAAAGGCATTCTTGGCTT  1139

seq1  CAAGTTCATTAGTGACATTTAGCAAACTGACTTAATATTCACTTAATCC  1181
        ||| || || ||||  |||||  || ||    |||||||||||||||
seq2  ACAGTCCA-TACTGAC--TTAGC-CACGGAACCTATATTCACTTAATCC  1184