BAC Information

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BAC

Clone NameB6Ng01-232J06
Chromosome17 (Build37)
Map Location 16,876,681 - 16,877,785
singlet/doubletsinglet
Overlap genenone
Upstream geneChd1, Rgmb, LOC100041365, Eif3s6-ps3, LOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072
Downstream geneEG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232J06.bB6Ng01-232J06.g
ACCGA044878GA044879
length1,1111,205
definitionB6Ng01-232J06.b B6Ng01-232J06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaagactgtggcagcctgttcaaggcctgcacatctccaagc
tgtgggaacttaaaactgggggcaggaagtggacatggggctctactacc
aagaagctatccacaattgatacctgttgtcaaatgtaaagtcactattt
tccaactgactctcactaaatataacaactcagggtagacctcatgtcct
ggaattgttgcccatcacaaacaaattcagtggtattttgtggacttttt
catttattttactttgctttgagattgtcttattgatcttttgcttattt
gttttgattttcacttttgtgagttgattgctattttttttcagtttggt
ttcttggttctttgggggtatttgtttgttttaagagagaatctgagttg
ggatttcaacatataaattttgatgaaagacacagaaattccaaacaaga
agaaatgttttatagtacaaccagcatcataagaatttctattcaaagga
tccagttttatactcctattttttatacacatatatagaaactatatgga
taaaataattataatgtaagcatatcaaaatttgagagaattataggatt
tacaacagaagctatacattctaccttaaaacatttaatttccaaattaa
aatactagtttgtgtataactccacaaatgcaatttaaaagtgtgccact
tactttctcgttatggtgaaaaatacatgaatgacaacttatcagggaaa
cgattaatttagtcactgtttctgagatatcaatccataaataactaatg
ccacagcttctgatgctggatgaggcagagcatgaaagggggcaggcaat
ggtacatcacaggtgctcatctcacagtggcaaagagaagggagaaaaca
gaggcagggctggcattctggtggtaaagtaggtattttcaaggcatgct
tccccgtgccctatctttttctaattagatcccactccctactttctaac
caataatgcatctttattaaacccataaaatacatttaattcattcatga
ggtcagaggtcccagatccagtcactttcgcaaactccttatctccaaca
tgacttgcatt
gaattcttgggtaccgctggcttctacagactctagatacctgggttggt
gaccttagctgcctgttgtaccccctaaccaaggaaggggaagtgtttgt
gtggaccccagatcaccagaaagcctttagagaaatgaaaaaggccctac
tgatggccagcctttgtctgacctaaccaagcctttcactctttatgtgg
aagagagatcaggggttgccaaaagagcccttactcagactttgggactt
tgaaaaaggctagtggcttacctatccaagaagttagaccctgttgccag
cgggtgattttcttgcctgaaagctattgctgccataatctgcttgtcaa
ggatgctgataagctcactctcggacagcaaacaactgtagtggcaccct
acactcttgaaagcattatctgaaagccccctgactgatggatgatgacc
aacgctcctgtgacacattatcagagctttttgttgactgaacgagtgac
cttcgctccacctgctgtcctcaatctctaccctactgcccaagacttca
cctactcatcactgcgctgacgttctggcagaagaaactggtactcgaaa
tgatctgaaggatcagatcagccttggcctgagagtttcaagctggtaca
tgaatggcagtagcctcgcagttgaaggactgagatggccaatataatag
ccaagaagatcctagaagaaatctttctgacgtaatggacctgcctttgt
tgcccaggtaaatcagggactggccaagatattagagattgattagaagt
ttcattgtgcatacaggctccaaaagctcaggacaggtttgaaaagatga
atagatttctaaaagagactggtgcagacttggtgctctttccccatgcc
cattactgtcttaaatgatgtttaaacctacatgttgttgtaatataatc
tgtaagctaagttaaaggcttgcaggtagtgcagaaagaaggctggtcac
aattggcctacagtgtaccaggccagtaccccaaaagaacatctcaccag
tttcagcctcttgctttggacttgatcaagtacacttattcatggcccag
accccctcagtcctacatagaaggtccttgccttaggtctgtttaactat
tcagtcttatctggtgattccattcctcccacattgtgaaattagcatac
tgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_16876681_16877785
seq2: B6Ng01-232J06.b_43_1153

seq1  GAATTCACAAAGACTGTGGCAGCCTGTTCAAGGCCTGCACATCTCCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAGACTGTGGCAGCCTGTTCAAGGCCTGCACATCTCCAAGC  50

seq1  TGTGGGAACTTAAAACTGGGGGCAGGAAGTGGACATGGGGCTCTACTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAACTTAAAACTGGGGGCAGGAAGTGGACATGGGGCTCTACTACC  100

seq1  AAGAAGCTATCCACAATTGATACCTGTTGTCAAATGTAAAGTCACTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTATCCACAATTGATACCTGTTGTCAAATGTAAAGTCACTATTT  150

seq1  TCCAACTGACTCTCACTAAATATAACAACTCAGGGTAGACCTCATGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTGACTCTCACTAAATATAACAACTCAGGGTAGACCTCATGTCCT  200

seq1  GGAATTGTTGCCCATCACAAACAAATTCAGTGGTATTTTGTGGACTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGTTGCCCATCACAAACAAATTCAGTGGTATTTTGTGGACTTTTT  250

seq1  CATTTATTTTACTTTGCTTTGAGATTGTCTTATTGATCTTTTGCTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTTACTTTGCTTTGAGATTGTCTTATTGATCTTTTGCTTATTT  300

seq1  GTTTTGATTTTCACTTTTGTGAGTTGATTGCTATTTTTTTTCAGTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATTTTCACTTTTGTGAGTTGATTGCTATTTTTTTTCAGTTTGGT  350

seq1  TTCTTGGTTCTTTGGGGGTATTTGTTTGTTTTAAGAGAGAATCTGAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTTCTTTGGGGGTATTTGTTTGTTTTAAGAGAGAATCTGAGTTG  400

seq1  GGATTTCAACATATAAATTTTGATGAAAGACACAGAAATTCCAAACAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAACATATAAATTTTGATGAAAGACACAGAAATTCCAAACAAGA  450

seq1  AGAAATGTTTTATAGTACAACCAGCATCATAAGAATTTCTATTCAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTTTATAGTACAACCAGCATCATAAGAATTTCTATTCAAAGGA  500

seq1  TCCAGTTTTATACTCCTATTTTTTATACACATATATAGAAACTATATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTTATACTCCTATTTTTTATACACATATATAGAAACTATATGGA  550

seq1  TAAAATAATTATAATGTAAGCATATCAAAATTTGAGAGAATTATAGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATTATAATGTAAGCATATCAAAATTTGAGAGAATTATAGGATT  600

seq1  TACAACAGAAGCTATACATTCTACCTTAAAACATTTAATTTCCAAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACAGAAGCTATACATTCTACCTTAAAACATTTAATTTCCAAATTAA  650

seq1  AATACTAGTTTGTGTATAACTCCACAAATGCAATTTAAAAGTGTGCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAGTTTGTGTATAACTCCACAAATGCAATTTAAAAGTGTGCCACT  700

seq1  TACTTTCTCGTTATGGTGAAAAATACATGAATGACAACTTATCAGGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTCGTTATGGTGAAAAATACATGAATGACAACTTATCAGGGAAA  750

seq1  CGATTAATTTAGTCACTGTTTCTGAGATATCAATCCATAAATAACTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTAATTTAGTCACTGTTTCTGAGATATCAATCCATAAATAACTAATG  800

seq1  CCACAGCTTCTGATGCTGGATGAGGCAGAGCATG-AAGGGGGCAGGCAAT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCACAGCTTCTGATGCTGGATGAGGCAGAGCATGAAAGGGGGCAGGCAAT  850

seq1  GGTACATCACAGGTGCTCATCTCACAGTGGCAAAGAG-AGGGAGAAAACA  898
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTACATCACAGGTGCTCATCTCACAGTGGCAAAGAGAAGGGAGAAAACA  900

seq1  GAGGCAGGGGCTGGCATTCTGGTGGTAAAGTAGGTATTTTCAAGGCATGC  948
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCA-GGGCTGGCATTCTGGTGGTAAAGTAGGTATTTTCAAGGCATGC  949

seq1  T--CCCGTGCCCTATCTTTTTCTAATTAGATCCCACTCCCTACTTTCT-A  995
      |  ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCCCCGTGCCCTATCTTTTTCTAATTAGATCCCACTCCCTACTTTCTAA  999

seq1  CCAATAATGGCATC-TTATTAAACCCAT-AAATACA-TTAATTCATTCAT  1042
      |||||||| ||||| ||||||||||||| ||||||| |||||||||||||
seq2  CCAATAAT-GCATCTTTATTAAACCCATAAAATACATTTAATTCATTCAT  1048

seq1  GAGGTCAGAGGTCCCAAGATCCAGTCACTTCCGCAAACT-CTTATCTCTC  1091
      ||||||||||||||| |||||||||||||| |||||||| |||||||| |
seq2  GAGGTCAGAGGTCCC-AGATCCAGTCACTTTCGCAAACTCCTTATCTC-C  1096

seq1  AACATGAC-TGCATT  1105
      |||||||| ||||||
seq2  AACATGACTTGCATT  1111