BAC Information

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BAC

Clone NameB6Ng01-234D17
Chromosome17 (Build37)
Map Location 67,802,575 - 67,803,631
singlet/doubletsinglet
Overlap genenone
Upstream geneRab12, 9130404H23Rik, Ptprm
Downstream geneLrrc30, Lama1, Arhgap28, D930040M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234D17.bB6Ng01-234D17.g
ACCGA046051GA046052
length1,0061,078
definitionB6Ng01-234D17.b B6Ng01-234D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactttgtagaccaggctggcctcgaaatctgcctgcctctgcct
cctgagtgctgagatcaaaggcatgcgccaccacacccggcctagtctat
gcattttgattggggaatcgagtccattgatgttaagagatattaaggaa
aaatgattgttacttcctgttatttttgttgttagaggtggaatcatgtt
tgtgtggctatcttcttttgggtttgttgaaagattaccttcttaatttt
ttctagggtgtagtttctctccttgtgttagtgttttctatctattattc
tttgtagggctggatttatggaaagatattgtgtaaatttggttttgcca
tggaatatcttggttactccatctgtggtaattgagagtttggctgggta
tagtagcctgggctggcatttgtgttctcttagggtttgtatgagatctg
cccaggatcttctggctttcatagtctctgatgaagtctggtgtaattct
gataggtctgcctttatatgttacttgatcattttcccttgctgctttta
atattctttctttgtttagcacatttggtgttttgattattatgtgacgg
gaggaatttcttttctggtccatctatttggagttctgtaggcttcttgt
atgttcgtgggcatctctttcttttgtttagggaggttttcttttataat
tttgttgaagatatttactttctctttgacttggaaatctttgctttctt
ctatacctattgtccttaggcttggtcttctcattgtgtcctggatttcc
tggatgttttgggttaggagctttttgctttttgcattttctttgactgt
tatgtcaatgttttctatggtatcttctgcctgagatctctcttctatct
cttgtattctgctgctgatgcttgcatctcctgatctctttcctaggttt
tctaactccagagttgtctccctttgttatttctttattgtttctcttac
attttt
ttgttctcagtggaccacaccacccagggtgcaagggcacatccatcctt
gactttgggacattttcattttgtcctgccattgggtcaaccagcctagg
aacattgagctctcatagctattccggtttatgctggaggtgggtcaggt
agggatggatggattttggtgtcagatgatatcagtaagatgttgctcag
tctgaggttacctggtggctcctagaaattctgaaagtcaggtgctataa
gcagtttggaaagggctagcccgaatctggcgccaacccctcccgagtgg
gtgcatataaattaaagtgccggcagactgaccaatcccaggaggacaca
tagccctccccagtgctggggtgtatataagcagtcctccctgggttccc
ggggttcccgtagcatcgaggcgttccaggaataaagctgttgagaagaa
tctgactgtgttgcgttttttccttgctggacgaggtgggcacaacacac
ctctatctgaggagctattgccaattaatagctgctagaggatagagttt
tctttaaggatacagttcttgttgaattgaccacatgtcagcagaaggcc
atatctccaaaactatatgggcagcacaaatggaacttgatgtatgagag
aacagaggacaaaacttgcctgggcagagacagcatacgcctatctaagt
ggagccacgggaggggtgaacatgaccattttggaattgaattctcaaaa
atatagtttgaaaaacaaacatgtaaggctcatggtgaacctgtaatgct
aacctatatttttcgtgttcttggtacactagaattggggaaaagattgc
ccctgtagagctagctaattttctgggagaatacagtttaagccccataa
aatccctccctgcttttgataatacaaacaaccaatttcagagccctcac
cccctaaatcataatctaatcaagtcttcacaccagtaaaatcaatacct
ccaatgggatgacccagtttaccccgatttaaggactattccccatagtc
ctgagaaccaccagaagtggggttaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_67802575_67803631
seq2: B6Ng01-234D17.g_77_1154

seq1  TTGTTCTCAGTGGACCACACCACCCAGGGTGCAAGGGCACATCCATCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCAGTGGACCACACCACCCAGGGTGCAAGGGCACATCCATCCTT  50

seq1  GACTTTGGGACATTTTCATTTTGTCCTGCCATTGGGTCAACCAGCCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGGGACATTTTCATTTTGTCCTGCCATTGGGTCAACCAGCCTAGG  100

seq1  AACATTGAGCTCTCATAGCTATTCCGGTTTATGCTGGAGGTGGGTCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGAGCTCTCATAGCTATTCCGGTTTATGCTGGAGGTGGGTCAGGT  150

seq1  AGGGATGGATGGATTTTGGTGTCAGATGATATCAGTAAGATGTTGCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGGATGGATTTTGGTGTCAGATGATATCAGTAAGATGTTGCTCAG  200

seq1  TCTGAGGTTACCTGGTGGCTCCTAGAAATTCTGAAAGTCAGGTGCTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTTACCTGGTGGCTCCTAGAAATTCTGAAAGTCAGGTGCTATAA  250

seq1  GCAGTTTGGAAAGGGCTAGCCCGAATCTGGCGCCAACCCCTCCCGAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGAAAGGGCTAGCCCGAATCTGGCGCCAACCCCTCCCGAGTGG  300

seq1  GTGCATATAAATTAAAGTGCCGGCAGACTGACCAATCCCAGGAGGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATAAATTAAAGTGCCGGCAGACTGACCAATCCCAGGAGGACACA  350

seq1  TAGCCCTCCCCAGTGCTGGGGTGTATATAAGCAGTCCTCCCTGGGTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTCCCCAGTGCTGGGGTGTATATAAGCAGTCCTCCCTGGGTTCCC  400

seq1  GGGGTTCCCGTAGCATCGAGGCGTTCCAGGAATAAAGCTGTTGAGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCCCGTAGCATCGAGGCGTTCCAGGAATAAAGCTGTTGAGAAGAA  450

seq1  TCTGACTGTGTTGCGTTTTTTCCTTGCTGGACGAGGTGGGCACAACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGTGTTGCGTTTTTTCCTTGCTGGACGAGGTGGGCACAACACAC  500

seq1  CTCTATCTGAGGAGCTATTGCCAATTAATAGCTGCTAGAGGATAGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTGAGGAGCTATTGCCAATTAATAGCTGCTAGAGGATAGAGTTT  550

seq1  TCTTTAAGGATACAGTTCTTGTTGAATTGACCACATGTCAGCAGAAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGGATACAGTTCTTGTTGAATTGACCACATGTCAGCAGAAGGCC  600

seq1  ATATCTCCAAAACTATATGGGCAGCACAAATGGAACTTGATGTATGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCCAAAACTATATGGGCAGCACAAATGGAACTTGATGTATGAGAG  650

seq1  AACAGAGGACAAAACTTGCCTGGGCAGAGACAGCATACGCCTATCTAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGACAAAACTTGCCTGGGCAGAGACAGCATACGCCTATCTAAGT  700

seq1  GGAGCCACGGGAGGGGTGAACATGACCATTTTGGAATTGAATTCTCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCACGGGAGGGGTGAACATGACCATTTTGGAATTGAATTCTCAAAA  750

seq1  ATATAGTTTGAAAAACAAACATGTAAGGCTCATGGTGAACCTGT-ATGCT  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATATAGTTTGAAAAACAAACATGTAAGGCTCATGGTGAACCTGTAATGCT  800

seq1  AACCTATATTTTTTCGTGTTCTTGGTACACTAGAATT-GGGAAAAGATTG  848
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  AACCTATA-TTTTTCGTGTTCTTGGTACACTAGAATTGGGGAAAAGATTG  849

seq1  CCCCTGTAGAGCTAGCTAA-TTTCT-GGAGAATACAG-TTAAG-CCCATA  894
      ||||||||||||||||||| ||||| ||||||||||| ||||| ||||||
seq2  CCCCTGTAGAGCTAGCTAATTTTCTGGGAGAATACAGTTTAAGCCCCATA  899

seq1  AAAT-CCTCCCTGC-TTTGAT-ATACAACCAACCAA-TTCAGAG-CCTCA  939
      |||| ||||||||| |||||| |||||| ||||||| ||||||| |||||
seq2  AAATCCCTCCCTGCTTTTGATAATACAAACAACCAATTTCAGAGCCCTCA  949

seq1  CCCC--TAATCATAATCTATTAAAGTC-TCACA-CAGT-AAATCAATACT  984
      ||||   |||||||||||| | ||||| ||||| |||| |||||||||| 
seq2  CCCCCTAAATCATAATCTAATCAAGTCTTCACACCAGTAAAATCAATACC  999

seq1  CCCAAT-GGATGACCCAAGTTACCCCAATT--AGGACTATCCCCAATAGT  1031
       ||||| ||||||||||  ||||||| |||  |||||||| ||| |||||
seq2  TCCAATGGGATGACCCAGTTTACCCCGATTTAAGGACTATTCCCCATAGT  1049

seq1  TCTGAG-ACCACCAG-AGT-GGGTTAAGC  1057
       ||||| |||||||| ||| |||||||||
seq2  CCTGAGAACCACCAGAAGTGGGGTTAAGC  1078