BAC Information

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BAC

Clone NameB6Ng01-236G19
Chromosome17 (Build37)
Map Location 69,553,792 - 69,554,905
singlet/doubletsinglet
Overlap geneEpb4.1l3
Upstream geneD930040M24Rik, EG622645
Downstream gene2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236G19.bB6Ng01-236G19.g
ACCGA047645GA047646
length1,1981,119
definitionB6Ng01-236G19.b B6Ng01-236G19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcacctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cttacctgacctaaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcctctagaattttcagccc
tatcttaatcacttgataacatgtgaaaaggaacaaaagggctcctaaca
ccagaaaaaattcaaggccaaacatattccactttacttctgatagactg
tcttgaatttcgttagaaagttcaagatcagacttacctcgtaaagctgt
actcactggtactctcgttccccagctgaaaagttctgaattcatacagt
tgaatccttcttaacagtctgctttacgggaacctttattaccgcgaccc
gcagttctggttctggaatgagggatcttccttgcgccagtcccgagttt
ttttctcgtcccggaattcggcaccaattgttattagacgcgttctcacg
accggccaggaagaacaccacagaccagaatcttctgcggcaaaacttta
ttgcttacatcttcaggagccagagtgcaagaagcaagagagcaagaagc
aagagagagagaaaacgaaaccccgtccctcttaaggagcattctccttc
gcctcggacgtgtcactccctgattggctgcagcccatcggccgagttga
cgtcacggggaaggcagagcacaagtagtcataagatacccttggcacat
gcgcagattatttgtttaccacttagaacacagctgtcagcgccatctgt
aacggtgaatgtggcgcggctcccacagctgctatgacatagtggagcat
gtgtcttcttacagttggggcttcttctggatatatgcccaggagaggta
tgctggatcctcgttaggtactatttcatttctgaggaaccgcgaactga
tttcgattgtgtacaagctgcaattcaccacaatggaggaggtttccttt
catctgcagatcgtgtacctgattgatctagccattctacatgtggta
gaattctgttttcaaatatgtttgttttttgaggacgtgacacaatgtat
ccaggcatccttaccagttcctccaagatcccctttcccacccacccaac
attgtatcttatgctacgcatatacttgtgtgtggcgccatcccttggag
tgtggctaacctactgggaaccacaccctcaaaaaacacacccctttcaa
gttgccaatggctccccacttatgggtgggacttagctctctcctcctga
ctcctcatgggttttgtctgtgtggcttgagtttgcacaggttctgtgtg
tactgtcctgactgctgtaagttcgtatgtgcaacttgttccctgttgtg
tatagagaatactcttgtgtgggctcaccacttctgcctcttagcatctt
tcttccccttcttcctcggtgagccctgtgaggagaatgtgggaagtaga
cattccatttagggctgagcattctgaattctgatttttattcccccttg
actggatatagatcagtgtgttcatcactatctacttttaaaaaaaagcc
tcactgatgaagtatgtagatgtagatctataggtataaggataaattat
taggagtctgtttattactatgctcatttaataaaatggtaatattaggt
tctccatatagcccatgacttatctagccataggttcttggcccagccat
ggtgtctaatacatattttcagttgtcttgatgttcaaacttgatccgat
cgtcacctactaaagctagaggaggaatggtagttgagctaagacctgcg
ggaggaaatggatgttaccttacctggtgctaggtaacaccagggactta
gaaggaggtgtgcttgtgttgtaattgttgtaaaaccacactcactgttt
tgtatttgggccctcagtgtctgtagtcagatggaatgacaactaaatga
cctctcgacttcccaagcctgaatttccaccatgttcaccctcccccacc
tccccacacatacactcacacattttcttggttactttagctggcttcca
ggacttagcagactaggaaaaggtatattttgccttttcagatttgttta
aacaggccttttaatgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69553792_69554905
seq2: B6Ng01-236G19.g_65_1183

seq1  GAATTCTGTTTTCAAATATGTTTGTTTTTTGAGGACGTGACACAATGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTCAAATATGTTTGTTTTTTGAGGACGTGACACAATGTAT  50

seq1  CCAGGCATCCTTACCAGTTCCTCCAAGATCCCCTTTCCCACCCACCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATCCTTACCAGTTCCTCCAAGATCCCCTTTCCCACCCACCCAAC  100

seq1  ATTGTATCTTATGCTACGCATATACTTGTGTGTGGCGCCATCCCTTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATCTTATGCTACGCATATACTTGTGTGTGGCGCCATCCCTTGGAG  150

seq1  TGTGGCTAACCTACTGGGAACCACACCCTCAAAAAACACACCCCTTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTAACCTACTGGGAACCACACCCTCAAAAAACACACCCCTTTCAA  200

seq1  GTTGCCAATGGCTCCCCACTTATGGGTGGGACTTAGCTCTCTCCTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAATGGCTCCCCACTTATGGGTGGGACTTAGCTCTCTCCTCCTGA  250

seq1  CTCCTCATGGGTTTTGTCTGTGTGGCTTGAGTTTGCACAGGTTCTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCATGGGTTTTGTCTGTGTGGCTTGAGTTTGCACAGGTTCTGTGTG  300

seq1  TACTGTCCTGACTGCTGTAAGTTCGTATGTGCAACTTGTTCCCTGTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCCTGACTGCTGTAAGTTCGTATGTGCAACTTGTTCCCTGTTGTG  350

seq1  TATAGAGAATACTCTTGTGTGGGCTCACCACTTCTGCCTCTTAGCATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGAATACTCTTGTGTGGGCTCACCACTTCTGCCTCTTAGCATCTT  400

seq1  TCTTCCCCTTCTTCCTCGGTGAGCCCTGTGAGGAGAATGTGGGAAGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTTCTTCCTCGGTGAGCCCTGTGAGGAGAATGTGGGAAGTAGA  450

seq1  CATTCCATTTAGGGCTGAGCATTCTGAATTCTGATTTTTATTCCCCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATTTAGGGCTGAGCATTCTGAATTCTGATTTTTATTCCCCCTTG  500

seq1  ACTGGATATAGATCAGTGTGTTCATCACTATCTACTTTTAAAAAAAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATATAGATCAGTGTGTTCATCACTATCTACTTTTAAAAAAAAGCC  550

seq1  TCACTGATGAAGTATGTAGATGTAGATCTATAGGTATAAGGATAAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATGAAGTATGTAGATGTAGATCTATAGGTATAAGGATAAATTAT  600

seq1  TAGGAGTCTGTTTATTACTATGCTCATTTAATAAAATGGTAATATTAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTCTGTTTATTACTATGCTCATTTAATAAAATGGTAATATTAGGT  650

seq1  TCTCCATATAGCCCATGACTTATCTAGCCATAGGTTCTTGGCCCAGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATAGCCCATGACTTATCTAGCCATAGGTTCTTGGCCCAGCCAT  700

seq1  GGTGTCTAATACATATTTTCAGTTGTCTTGATGTTCAAACTTGATCCGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTAATACATATTTTCAGTTGTCTTGATGTTCAAACTTGATCCGAT  750

seq1  CGTCACCTACTAAAGCTAGAGGAGGAATGGTAGTTGAGCTAAGACCTGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACCTACTAAAGCTAGAGGAGGAATGGTAGTTGAGCTAAGACCTGCG  800

seq1  GGAGGAAATGGATGTTACCTTACCTGGTGCTAGGTAACACCAGGGAC-TA  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGAGGAAATGGATGTTACCTTACCTGGTGCTAGGTAACACCAGGGACTTA  850

seq1  GAAGGAGGTGTGC-TGTGTTGTAATTGTTGTAAAACCACACTCACTGTTT  898
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGTGTGCTTGTGTTGTAATTGTTGTAAAACCACACTCACTGTTT  900

seq1  TGTATTT-GGCCCTCAGTGTCTGTAGTCAGATGAAATGACAACTAAAATG  947
      ||||||| ||||||||||||||||||||||||| |||||||||| |||||
seq2  TGTATTTGGGCCCTCAGTGTCTGTAGTCAGATGGAATGACAACT-AAATG  949

seq1  ACCTCTCGACTTCCCAAGCCTGAA-TTCCACCATGTTCACCCTCCCCCAC  996
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACCTCTCGACTTCCCAAGCCTGAATTTCCACCATGTTCACCCTCCCCCAC  999

seq1  CTCCCCACACATACACTCACACAATTTCTTGG-TACTTAAGCTGGCTTCC  1045
      ||||||||||||||||||||||| |||||||| ||||| |||||||||||
seq2  CTCCCCACACATACACTCACACATTTTCTTGGTTACTTTAGCTGGCTTCC  1049

seq1  AGGACTAAGCAGACCAAGAAAAGGTA-ATATTTGCTTTCAAGATGTGTTT  1094
      |||||| ||||||| | ||||||||| || ||  ||||  |||| |||||
seq2  AGGACTTAGCAGACTAGGAAAAGGTATATTTTGCCTTTTCAGATTTGTTT  1099

seq1  AAACAG--CTTTTAAAATGTGA  1114
      ||||||  |||||  |||||||
seq2  AAACAGGCCTTTT--AATGTGA  1119