BAC Information

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BAC

Clone NameB6Ng01-236P20
Chromosome17 (Build37)
Map Location 46,973,644 - 46,974,525
singlet/doubletsinglet
Overlap geneBC032203
Upstream geneVegfa, Mrps18a, 1700027N10Rik, Mad2l1bp, Gtpbp2, Polh, Xpo5, Rpo1-1, Yipf3, Gm88, Tjap1, Egfl9, Abcc10, BC040756, Zfp318, LOC677168, Crip3, Slc22a7, EG328825, Ttbk1, BC048355, Parc, Srf, Ptk7, Klc4, Mrpl2, Cul7, BC011248, Klhdc3, Mea1, Ppp2r5d, Pex6, Gnmt, Tnrc5, Ptcra, 2310039H08Rik, Rpl7l1
Downstream geneA330017A19Rik, Tbcc, Prph2, Ubr2, LOC100043385, EG240110, Trerf1, Mrps10, Guca1b, Guca1a, EG545208, 1700001C19Rik, AI661453, Tbn, Ccnd3, Bysl, Trfp, LOC668463, Usp49, 1110002E23Rik, Frs3, Pgc, LOC100043405, Tcfeb, Mdfi
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236P20.g
ACCGA048072
length887
definitionB6Ng01-236P20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatgtagatcaggctggttttgaactcgcagagatctgctta
tttctgcttctagagtggtaggattaaaggcatgcactaccatgcctgcc
tgcttttaaattgtgtttgtctgtttttgcctttttgagacatggtttct
ctgtggaactctggctgttctggaattcactgtgaagaccaggctggcct
cggactcagacatcctcctgcctctgcctctgcttctgcctcctgagttc
tgggtgggactaaagttgtacactgccacaccttgctctgctttcacatt
taaaactacatgtgtgttggtggtggcccacgcctttaatcccagcattt
gggaggcagagacaggctgatttctgagttcgaggctagcctggtctaca
gagtgagttccaggacagccagggctacacagagaaaccctgtcttggaa
aaacaaaaacaaaaacaaaaaacaaaaaaagaaaaaacaaaacaaaacaa
aacaaaaaaaactgcatgtgtgcctgatgtctctagaaactcgtgggcgg
agcacactgtggaggtagaggatgcctctggaccggagctcatccctccc
tcccataagtaggttcagacatcagtctcaggtcctcaggcttacactgg
ggatcaagaggcacctttacctactgaggcattttgcacccctttttgga
caggatctggggtaaactagactggcctggaattggctatgaagctgatg
atggtcttgaatggctctttcttgccccccacctcccaagcgctgggatt
cacgggtgcgcgccttccgtccccctgggtttacatgggcgctggagaac
ctaccagtgttttatgtcactagttattcactctccg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_46973644_46974525
seq2: B6Ng01-236P20.g_68_954

seq1  GAATTCACTATGTAGATCAGGCTGGTTTTGAACTCGCAGAGATCTGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGATCAGGCTGGTTTTGAACTCGCAGAGATCTGCTTA  50

seq1  TTTCTGCTTCTAGAGTGGTAGGATTAAAGGCATGCACTACCATGCCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTCTAGAGTGGTAGGATTAAAGGCATGCACTACCATGCCTGCC  100

seq1  TGCTTTTAAATTGTGTTTGTCTGTTTTTGCCTTTTTGAGACATGGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAAATTGTGTTTGTCTGTTTTTGCCTTTTTGAGACATGGTTTCT  150

seq1  CTGTGGAACTCTGGCTGTTCTGGAATTCACTGTGAAGACCAGGCTGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAACTCTGGCTGTTCTGGAATTCACTGTGAAGACCAGGCTGGCCT  200

seq1  CGGACTCAGACATCCTCCTGCCTCTGCCTCTGCTTCTGCCTCCTGAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTCAGACATCCTCCTGCCTCTGCCTCTGCTTCTGCCTCCTGAGTTC  250

seq1  TGGGTGGGACTAAAGTTGTACACTGCCACACCTTGCTCTGCTTTCACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGACTAAAGTTGTACACTGCCACACCTTGCTCTGCTTTCACATT  300

seq1  TAAAACTACATGTGTGTTGGTGGTGGCCCACGCCTTTAATCCCAGCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTACATGTGTGTTGGTGGTGGCCCACGCCTTTAATCCCAGCATTT  350

seq1  GGGAGGCAGAGACAGGCTGATTTCTGAGTTCGAGGCTAGCCTGGTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGACAGGCTGATTTCTGAGTTCGAGGCTAGCCTGGTCTACA  400

seq1  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGGAA  450

seq1  AAACAAAAACAAAAACAAAAAACAAAAAAAGAAAAAACAAAACAAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAACAAAAACAAAAAACAAAAAAAGAAAAAACAAAACAAAACAA  500

seq1  AACAAAAAAAACTGCATGTGTGCCTGATGTCTCTAGAAACTCGTGGGCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAAACTGCATGTGTGCCTGATGTCTCTAGAAACTCGTGGGCGG  550

seq1  AGCACACTGTGGAGGTAGAGGATGCCTCTGGACCGGAGCTCATCCCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGTGGAGGTAGAGGATGCCTCTGGACCGGAGCTCATCCCTCCC  600

seq1  TCCCATAAGTAGGTTCAGACATCAGTCTCAGGTCCTCAGGCTTACACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAAGTAGGTTCAGACATCAGTCTCAGGTCCTCAGGCTTACACTGG  650

seq1  GGATCAAGAGGCACCTTTACCTACTGAGGCATTTTGCACCCC-TTTTGGA  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGATCAAGAGGCACCTTTACCTACTGAGGCATTTTGCACCCCTTTTTGGA  700

seq1  CAGGATCTGGGGTAAACTAGACTGGCCTGGAATTGGCTATGAAGCTGAGG  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGGATCTGGGGTAAACTAGACTGGCCTGGAATTGGCTATGAAGCTGATG  750

seq1  ATGGTCTTGAATGGCTCTTTCT--GCCCCCACCTCCCAAGCGCTGGGA-T  796
      ||||||||||||||||||||||   ||||||||||||||||||||||| |
seq2  ATGGTCTTGAATGGCTCTTTCTTGCCCCCCACCTCCCAAGCGCTGGGATT  800

seq1  CACGGGTGCGCGCC-TCCGTCCCCCTGGG-TTACAT-GGCGCTGGAGAAC  843
      |||||||||||||| |||||||||||||| |||||| |||||||||||||
seq2  CACGGGTGCGCGCCTTCCGTCCCCCTGGGTTTACATGGGCGCTGGAGAAC  850

seq1  CTACCCAGGGTTTTATGTACACTAGTTAATCACTCTCCG  882
      ||| |||| ||||||||| ||||||||| ||||||||||
seq2  CTA-CCAGTGTTTTATGT-CACTAGTTATTCACTCTCCG  887