BAC Information

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BAC

Clone NameB6Ng01-238H06
Chromosome17 (Build37)
Map Location 38,284,389 - 38,285,484
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132
Downstream geneOlfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985, LOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238H06.bB6Ng01-238H06.g
ACCGA049143GA049144
length1,1911,098
definitionB6Ng01-238H06.b B6Ng01-238H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcgcctcggacgtgtcactccttgattggctgcagcccat
cggccgagttgacgtcacagggaaagcagagcacaagtagtcataagata
cccttggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggggcggctcccaacatctccccc
cttttcttttaataagagcaaataggccacccatattaatgagagtggag
atagaggtcaaatccccagtgtgtaggtaaaggagccatgtacaggatta
gctcttaggcttacaggcttttacccagagcaaccctgacctgctcccgt
gtcgttttgcctgggggaagggaactaggacactgaaccttcatgaaaga
tgacatgtctccctagaataggctcatatatgccgcagagcctttccatt
gcagtgcttagccttgcaactctctcgggctgctgaagcacactcactct
atcccgtgcaatgagtctagcctcatgggatataagagctgagtggccag
cgacctattgcctaagcatagatatatcaggggaagctccatgttctagt
cctgcaagcgcctgggcaataaccaccttgtctctcctagtttgggcctt
aagcttacagaccaatcaaagaagcaacactaatccacagcaaagtgtat
ctccaaataatattaatcccacccattttttaaagaaagaaaatgctgag
gagatccaattgggtaatcctttggtcagggacaggtccaagcgcgtgga
gttgacctgaagtctcaattcccgaaaggatctgttcaattcagccatcc
aattctgtaacatatactgaaaaagactttttgacaaattagctgcccta
gtaaatttaacatactgaatggaagtaacacacaatcccggaaactttgt
tcacatcctgctgagtatttgtcatatacatctagtgtatctggacagat
ctatgagtgataccagcatgagacctctctgtatcttgacatagctgaag
ctgtcatctatgactgtagtcacctgaggctgacaagtgttaatgagtca
gtcgtctgaccggtccagaccggagctaggcgtgtctgatagcctaacag
tcctagttgatgggtagtgggccagaagaatctcttgtgac
gaattcagatatcagttgacaaaggatacttggacatatacttataatat
caatgtgaataacaaaacaatatctctgagtgttgacccaatttttataa
tgaaaaagagaattaaaatcagttgatgaataaatacatctagaagatga
atgagctaataatgatttatcacaaattattaaatgtcaaaccttccact
aaatagttaaaattaagcacatatatgatacaaaattaagcacatatatg
atacaaaagaacaacactgtaattgagtcttaactcatttggtttataaa
tagaggattgttgataactgtacaattatgaagaaaaacgtcaagtttta
actacttgcttaacctcaagtacataaaggaggcttgtagatatctcaaa
tgtattcattacacatgtagaaggtttgatagttcagcccagaataaaga
attggaccagccaattttccatactaagatctcagagctctttcttccaa
cttctctgactgattcctggaagtatttctaagatgtttcagtaatgcct
ttatcactgctcttaaaattagttcctcacctttatgttacatgtatagt
cagataattcaaaactccctttcaaaatttgtatcagaaataaaagttaa
atcaacagttgctataatattttgtgcatgtaggattatatttgtgtgtg
aatgtgtgtgagttcatgtttctattttatggatgtgtcctgcataaaaa
atccagagtctatgtcaaatatttctatacttgatttctactttatgttt
ggagactgtgcctcctgctaatcttggagttcatcaatacagatacatta
gctggtcagcaagctccagaaaaataagcagtttaatttttttactatag
atgggaaatatgtatcccttgccatcatttttacctaagtactgaagata
aaacccaggtcctcttgctttggctcaagctctatatggactgaagaatg
tctcctaaccatcacgatggcattcaaggcggtggatgctatctgggttc
ccataggtcacaggcaatgggatcatggaggttttgctcttcctataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38284389_38285484
seq2: B6Ng01-238H06.g_66_1163

seq1  GAATTCAGATATCAGTTGACAAAGGATACTTGGACATATACTTATAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATATCAGTTGACAAAGGATACTTGGACATATACTTATAATAT  50

seq1  CAATGTGAATAACAAAACAATATCTCTGAGTGTTGACCCAATTTTTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGAATAACAAAACAATATCTCTGAGTGTTGACCCAATTTTTATAA  100

seq1  TGAAAAAGAGAATTAAAATCAGTTGATGAATAAATACATCTAGAAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAGAATTAAAATCAGTTGATGAATAAATACATCTAGAAGATGA  150

seq1  ATGAGCTAATAATGATTTATCACAAATTATTAAATGTCAAACCTTCCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTAATAATGATTTATCACAAATTATTAAATGTCAAACCTTCCACT  200

seq1  AAATAGTTAAAATTAAGCACATATATGATACAAAATTAAGCACATATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTAAAATTAAGCACATATATGATACAAAATTAAGCACATATATG  250

seq1  ATACAAAAGAACAACACTGTAATTGAGTCTTAACTCATTTGGTTTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAAGAACAACACTGTAATTGAGTCTTAACTCATTTGGTTTATAAA  300

seq1  TAGAGGATTGTTGATAACTGTACAATTATGAAGAAAAACGTCAAGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGATTGTTGATAACTGTACAATTATGAAGAAAAACGTCAAGTTTTA  350

seq1  ACTACTTGCTTAACCTCAAGTACATAAAGGAGGCTTGTAGATATCTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTGCTTAACCTCAAGTACATAAAGGAGGCTTGTAGATATCTCAAA  400

seq1  TGTATTCATTACACATGTAGAAGGTTTGATAGTTCAGCCCAGAATAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATTACACATGTAGAAGGTTTGATAGTTCAGCCCAGAATAAAGA  450

seq1  ATTGGACCAGCCAATTTTCCATACTAAGATCTCAGAGCTCTTTCTTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACCAGCCAATTTTCCATACTAAGATCTCAGAGCTCTTTCTTCCAA  500

seq1  CTTCTCTGACTGATTCCTGGAAGTATTTCTAAGATGTTTCAGTAATGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGACTGATTCCTGGAAGTATTTCTAAGATGTTTCAGTAATGCCT  550

seq1  TTATCACTGCTCTTAAAATTAGTTCCTCACCTTTATGTTACATGTATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACTGCTCTTAAAATTAGTTCCTCACCTTTATGTTACATGTATAGT  600

seq1  CAGATAATTCAAAACTCCCTTTCAAAATTTGTATCAGAAATAAAAGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATTCAAAACTCCCTTTCAAAATTTGTATCAGAAATAAAAGTTAA  650

seq1  ATCAACAGTTGCTATAATATTTTGTGCATGTAGGATTATATTTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAGTTGCTATAATATTTTGTGCATGTAGGATTATATTTGTGTGTG  700

seq1  AATGTGTGTGAGTTCATGTTTCTATTTTATGGATGTGTCCTGCATAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGTGAGTTCATGTTTCTATTTTATGGATGTGTCCTGCATAAAAA  750

seq1  ATCCAGAGTCTATGTCAAATATTTCTATACTTGATTTCTACTTTATGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAGTCTATGTCAAATATTTCTATACTTGATTTCTACTTTATGTTT  800

seq1  GGAGACTGTGCCTCCTGCTAATCTTGGAGTTCATCAATACAGATACATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTGTGCCTCCTGCTAATCTTGGAGTTCATCAATACAGATACATTA  850

seq1  GCTGGTCAGCAAGCTCCAGAAAAATAAGCAGTTTAATTTTTTTAACTATA  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTGGTCAGCAAGCTCCAGAAAAATAAGCAGTTTAATTTTTTT-ACTATA  899

seq1  GATGGGAAATATGTATCCCTTGCCATCATTTTTACCTAAGTACTGAAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGAAATATGTATCCCTTGCCATCATTTTTACCTAAGTACTGAAGAT  949

seq1  AAAACCCAGGTCCTCTTGCTTTGGCTCAAAGCTCTATATGGACTGA--GA  998
      ||||||||||||||||||||||||||| ||||||||||||||||||   |
seq2  AAAACCCAGGTCCTCTTGCTTTGGCTC-AAGCTCTATATGGACTGAAGAA  998

seq1  TGTCTCCTAACCATCACGATGGCATTTCAAGCGTGGAATGCTAATCTTGG  1048
      ||||||||||||||||||||||||||  | |||  | ||||| |||| ||
seq2  TGTCTCCTAACCATCACGATGGCATTCAAGGCGGTGGATGCT-ATCTGGG  1047

seq1  TTTCCATA-GTCACAAGCAAT-GGATCAT-GAGGTTTTGCTCTTCCTATA  1095
      || ||||| |||||| ||||| ||||||| ||||||||||||||||||||
seq2  TTCCCATAGGTCACAGGCAATGGGATCATGGAGGTTTTGCTCTTCCTATA  1097

seq1  A  1096
      |
seq2  A  1098