BAC Information

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BAC

Clone NameB6Ng01-244I11
Chromosome17 (Build37)
Map Location 92,385,754 - 92,386,764
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
Downstream geneEG640442, LOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244I11.bB6Ng01-244I11.g
ACCGA053639GA053640
length8971,010
definitionB6Ng01-244I11.b B6Ng01-244I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacatagattggaccaggaaagaaattctttctttaatataata
atcaaaacaagcaacatataaaggcactctgggaggttgccagataatta
tggagtggaacctagaataaatatcagcatgccctcattttggtttaatt
aaaagaggaaataaattaggaaggtgtgattgtggaacaggaattgggtt
atcatgacctttaacaacttcttgctgactttgagggaacctgaggaaaa
tgggtttgaggatgttggtctactcttaggagagtaagttgatttcttgc
tgtccagggtctgtggaaacatctatcgatagattggaagtaatacgtcc
agtagaagcttctgtgtctctaagagtagtttggagaatctagggtttgc
ttctctatagctgtgctgggtatagtaaatgcctggatttgacatgatgc
tgaaacacacacacacacacacacacacacacacacacacacacacactc
acacattcatgcacacacatgtatgtgtgtgtgtgtgtgtgtgtgtatat
atatatatatatatatacacacacacacacacacacacacatgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtatggataaaggcgtgcatactttatcgcgcgcat
ggagagagaggcgcacgctagatatttctccactcatagagacagagact
tttttggttgtgtgtgtctctctctctatctatatatatgtctacacaga
ggcggagagaagaattttctctctctatgtgagtcgctacacacacgata
tttttctgggtttccaggtgtagagagagacgtgttaggactgtact
gaattctctagttcggcttagagaattcttactagaaataataagttttc
tttatttcatagaatggtcaactttctgtcaccttatgcaaagtatgaca
ttagtgtatagttctttaaatttatttatcaattaaaattctaagtatat
gaataattgagaatgttaagatcaaagtgtatcatttcacagttacagaa
aattctattttgatttaatgggtacatatttattagaaaactaaaacaaa
gaaatagaacagaatgccattatttatgcctataatctagtactcctgta
aactatgaccagaagactttctctaatttcatgaggcaggcataagctac
ataatatgtttgggaaagtcttgttaacagagaaactttatgtttaaata
tcaattattaatgaatatacggaaatacaagataaaccaaataaaccaat
cccaaaagcaacagcaacaaattctggtatagatagaaactacaatgtgt
tttcataactattcatctactatcagttacttaatactgttgcatgcctt
taattagtccatgttacaagagtttattctgataatttatttttattttt
acctgaacatatatcatttcatttcatcaggttataaacacattcattta
ataaaatacagcctcattatgatacatatttttaaaaaggtataataaga
tttttattaaaataaaaccatcagtatttggttaggaaattagtgcatat
caccaagaacaaatactcctaagtacatttgattgttgaagatgcaaata
taataattatctttcaaatactagaatgtcagttttaaaatgtttatttt
tgagattataattacatcattactctgttgacttccttcttctaaacccc
tcataggactcttaaaaaatcatatcttttctcactaattgctgttacat
gcatatgtatgttgcatatgtacatatgtatgtatatgtgtgtgtatgtg
tgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92385754_92386764
seq2: B6Ng01-244I11.g_67_1076

seq1  GAATTCTCTAGTTCGGCTTAGAGAATTCTTACTAGAAATAATAAGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGTTCGGCTTAGAGAATTCTTACTAGAAATAATAAGTTTTC  50

seq1  TTTATTTCATAGAATGGTCAACTTTCTGTCACCTTATGCAAAGTATGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATAGAATGGTCAACTTTCTGTCACCTTATGCAAAGTATGACA  100

seq1  TTAGTGTATAGTTCTTTAAATTTATTTATCAATTAAAATTCTAAGTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTATAGTTCTTTAAATTTATTTATCAATTAAAATTCTAAGTATAT  150

seq1  GAATAATTGAGAATGTTAAGATCAAAGTGTATCATTTCACAGTTACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTGAGAATGTTAAGATCAAAGTGTATCATTTCACAGTTACAGAA  200

seq1  AATTCTATTTTGATTTAATGGGTACATATTTATTAGAAAACTAAAACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATTTTGATTTAATGGGTACATATTTATTAGAAAACTAAAACAAA  250

seq1  GAAATAGAACAGAATGCCATTATTTATGCCTATAATCTAGTACTCCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAACAGAATGCCATTATTTATGCCTATAATCTAGTACTCCTGTA  300

seq1  AACTATGACCAGAAGACTTTCTCTAATTTCATGAGGCAGGCATAAGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGACCAGAAGACTTTCTCTAATTTCATGAGGCAGGCATAAGCTAC  350

seq1  ATAATATGTTTGGGAAAGTCTTGTTAACAGAGAAACTTTATGTTTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGTTTGGGAAAGTCTTGTTAACAGAGAAACTTTATGTTTAAATA  400

seq1  TCAATTATTAATGAATATACGGAAATACAAGATAAACCAAATAAACCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATTAATGAATATACGGAAATACAAGATAAACCAAATAAACCAAT  450

seq1  CCCAAAAGCAACAGCAACAAATTCTGGTATAGATAGAAACTACAATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGCAACAGCAACAAATTCTGGTATAGATAGAAACTACAATGTGT  500

seq1  TTTCATAACTATTCATCTACTATCAGTTACTTAATACTGTTGCATGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAACTATTCATCTACTATCAGTTACTTAATACTGTTGCATGCCTT  550

seq1  TAATTAGTCCATGTTACAAGAGTTTATTCTGATAATTTATTTTTATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTCCATGTTACAAGAGTTTATTCTGATAATTTATTTTTATTTTT  600

seq1  ACCTGAACATATATCATTTCATTTCATCAGGTTATAAACACATTCATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAACATATATCATTTCATTTCATCAGGTTATAAACACATTCATTTA  650

seq1  ATAAAATACAGCCTCATTATGATACATATTTTTAAAAAGGTATAATAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATACAGCCTCATTATGATACATATTTTTAAAAAGGTATAATAAGA  700

seq1  TTTTTATTAAAATAAAACCATCAGTATTTGGTTAGGAAATTAGTGCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAAAATAAAACCATCAGTATTTGGTTAGGAAATTAGTGCATAT  750

seq1  CACCAAGAACAAATACTCCTAAGTACATTTGATTGTTGAAGATGCAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGAACAAATACTCCTAAGTACATTTGATTGTTGAAGATGCAAATA  800

seq1  TAATAATTATCTTTCAAATACTAGAATGTCAGGTTTTAAAATGTTTATTT  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAATAATTATCTTTCAAATACTAGAATGTCA-GTTTTAAAATGTTTATTT  849

seq1  TTGAGATTATAATTACATCATTACTCTGTTGACTTCCTTCTTCTAAACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTATAATTACATCATTACTCTGTTGACTTCCTTCTTCTAAACCC  899

seq1  CTCATAGGACTCTTAAAAAATCATATCTTTTCTCACTAATTGCTGTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGGACTCTTAAAAAATCATATCTTTTCTCACTAATTGCTGTTACA  949

seq1  TGCATATGTATGTTGCATATGTACATATGTATGTATATGTGTGTGTATGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGTATGTTGCATATGTACATATGTATGTATATGTGTGTGTATGT  999

seq1  GTGTGTGTGTG  1011
      |||||||||||
seq2  GTGTGTGTGTG  1010