BAC Information

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BAC

Clone NameB6Ng01-244M16
Chromosome17 (Build37)
Map Location 13,510,286 - 13,511,411
singlet/doubletsinglet
Overlap genenone
Upstream geneMap3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap, Sod2, Gpr31c, Tcp10c, Ttll2, Unc93a, Smok2a, Smok2b
Downstream geneLOC667359, LOC100041352, LOC667372, LOC667384, Smok4a, Tcte2, Mllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244M16.bB6Ng01-244M16.g
ACCGA053840GA053841
length1,1121,169
definitionB6Ng01-244M16.b B6Ng01-244M16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgattaacttgccatagtttaaaaagttattatgcattcatg
agaaaatcagtacaaacatgggtgcatgacagcttatcaaccttaatgta
tataattgcatggggtgttacccttactgaaatttagaaactttctgctt
atgtattatatacacaatgaagtttatgaaactaagttaatgttttctct
ccttgggttttctttaggatattaggaagcagaagctgagttcaggcaca
tggttattttaacaggaggacatttcatgcttttatatatgctaatacag
atagaatcggttagataactggggtgatttgaacctgtagagattttaat
ttccatttttttagacatagacttttatgtatattgtatttttatcttat
ttcgttacaaataggatttatatatacatgtacatcctttccaactactc
gttcacttaagaatttatagacagaaaatgataacaagtgactcagtttg
tgacagatggcttaatctttagtaagcaccaggcctcatgataaagtgtg
cagcagtttccttctggtctgcagctgaacatttaaacagttaaacattt
gtctttataagaaggaccttggtttggttgtcccttcacaccaatgatcc
caaactaagatgccatctgtttactgatcttagactttgaagaacatgga
gactttgtcagagactctgagatctaataaacactgccagcaaagtagca
agatgggaaaaaaatcatctatttatacacaaattaaaaaatcagaaacc
aggcaggaggggtgcatgcctttaatcccagcactcagaggcagaagcag
aggcagaggcaggtggatctctgtgagtttgaggccagcctggttctaca
gggggggcagccaaggatacacagagaaaaaccatgtcttgaacactaaa
cagaaaaacacagaagagaaaatcactagaaacgtcagaaaacattcctt
taacatattatcaaaataaacctaagagcagcatgcccagaacagaagcc
tctacagaaacactaagagaagaaatgaagaatacctagaatatgccaag
accttctcatgc
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcagtgcgcag
agaggcaatgcgcagagaggcagtgcgcagactcattcattcccagagag
gaacaaaggaaaatacaacaggcatttccggtctttgaaggagccgaggg
tgggcgtgtccacgctccggtagaatacttacaaattaaagagcttgccg
agtcggtccgtaaatacggaaccaatgctaattttaccttggtgcagtta
gacaggctcgccggcatggcactaactcctgctgactggcaaacggttgt
aaaagccgctctccctagtatgggcaaatatatggaatggagagcgcttt
ggcacgaagctgcacaagcgcaggcccgagcaaacgcagctgctttgact
ccagagcagagagattggacttttgacttgttaacgggtcagggagctta
ttctgctgatcagacaaactaccattggggagcttatgcccagatttctt
ccacggctattagggcctggaaggcgctctctcgagcaggtgaaaccact
gggcagttaacaaagataatccagggacctcaggaatccttctcagattt
tgtggccagaatgacagaggcagcagagcgtatttttggagagtcagagc
aagctgcgcctctgatagaacagctaatctatgagcaagccacaaaggga
gtgccgagcggccatagcccccaagaaaagaacaaaggcttacaagactg
gctcaggtctgtcgagagctgggggaccttctcacaatgcaggctagcgg
ccgccatctccaatctcagaaccgctcatgagcagaattgatcagaggac
atggtttactgccgaaaggcctggcattagaaagatggcagagctcgata
acagaggaacctcaactttgccttaagtgtgcagtatccataagaagctg
tacagggttcgcactctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_13510286_13511411
seq2: B6Ng01-244M16.b_47_1158

seq1  GAATTCTTTGATTAACTTGCCATAGTTTAAAAAGTTATTATGCATTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATTAACTTGCCATAGTTTAAAAAGTTATTATGCATTCATG  50

seq1  AGAAAATCAGTACAAACATGGGTGCATGACAGCTTATCAACCTTAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCAGTACAAACATGGGTGCATGACAGCTTATCAACCTTAATGTA  100

seq1  TATAATTGCATGGGGTGTTACCCTTACTGAAATTTAGAAACTTTCTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGCATGGGGTGTTACCCTTACTGAAATTTAGAAACTTTCTGCTT  150

seq1  ATGTATTATATACACAATGAAGTTTATGAAACTAAGTTAATGTTTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTATATACACAATGAAGTTTATGAAACTAAGTTAATGTTTTCTCT  200

seq1  CCTTGGGTTTTCTTTAGGATATTAGGAAGCAGAAGCTGAGTTCAGGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTTTTCTTTAGGATATTAGGAAGCAGAAGCTGAGTTCAGGCACA  250

seq1  TGGTTATTTTAACAGGAGGACATTTCATGCTTTTATATATGCTAATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATTTTAACAGGAGGACATTTCATGCTTTTATATATGCTAATACAG  300

seq1  ATAGAATCGGTTAGATAACTGGGGTGATTTGAACCTGTAGAGATTTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCGGTTAGATAACTGGGGTGATTTGAACCTGTAGAGATTTTAAT  350

seq1  TTCCATTTTTTTAGACATAGACTTTTATGTATATTGTATTTTTATCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTTTAGACATAGACTTTTATGTATATTGTATTTTTATCTTAT  400

seq1  TTCGTTACAAATAGGATTTATATATACATGTACATCCTTTCCAACTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTACAAATAGGATTTATATATACATGTACATCCTTTCCAACTACTC  450

seq1  GTTCACTTAAGAATTTATAGACAGAAAATGATAACAAGTGACTCAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTAAGAATTTATAGACAGAAAATGATAACAAGTGACTCAGTTTG  500

seq1  TGACAGATGGCTTAATCTTTAGTAAGCACCAGGCCTCATGATAAAGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATGGCTTAATCTTTAGTAAGCACCAGGCCTCATGATAAAGTGTG  550

seq1  CAGCAGTTTCCTTCTGGTCTGCAGCTGAACATTTAAACAGTTAAACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTTCCTTCTGGTCTGCAGCTGAACATTTAAACAGTTAAACATTT  600

seq1  GTCTTTATAAGAAGGACCTTGGTTTGGTTGTCCCTTCACACCAATGATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTATAAGAAGGACCTTGGTTTGGTTGTCCCTTCACACCAATGATCC  650

seq1  CAAACTAAGATGCCATCTGTTTACTGATCTTAGACTTTGAAGAACATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAAGATGCCATCTGTTTACTGATCTTAGACTTTGAAGAACATGGA  700

seq1  GACTTTGTCAGAGACTCTGAGATCTAATAAACACTGCCAGCAAAGTAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGTCAGAGACTCTGAGATCTAATAAACACTGCCAGCAAAGTAGCA  750

seq1  AGATGGGAAAAAAATCATCTATTTATACACAAATTAAAAAATCAGAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAAAAAAATCATCTATTTATACACAAATTAAAAAATCAGAAACC  800

seq1  AGGCAGGAGGGGTGCATGCCTTTAATCCCAGCACTCAGGAGGCAGAAGCA  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGCAGGAGGGGTGCATGCCTTTAATCCCAGCACTCA-GAGGCAGAAGCA  849

seq1  GAGGCAGAGGCAGGTGGATCTCTGTGAGTTTGAGGCCAGCCTGG-TCTAC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGGCAGAGGCAGGTGGATCTCTGTGAGTTTGAGGCCAGCCTGGTTCTAC  899

seq1  AGGGGGGGCAGCCAAGGATACACAGAGAAAAACCATGTCTTGAACAACTA  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGGGGGCAGCCAAGGATACACAGAGAAAAACCATGTCTTGAAC-ACTA  948

seq1  AACAAGAAAAACAACAAGAAGAAGAAAATCACTAGAAACGTCAGAAAAAC  999
      ||| |||||||||   ||||| ||||||||||||||||||||||||||  
seq2  AAC-AGAAAAACA--CAGAAG-AGAAAATCACTAGAAACGTCAGAAAA--  992

seq1  AATCCCTTTAACAATATTATCAAAATAAAACCTAGGAGCAAGCATGCCCA  1049
       || |||||||| ||||||||||||| ||||||| |||| ||||||||| 
seq2  CATTCCTTTAAC-ATATTATCAAAAT-AAACCTAAGAGC-AGCATGCCC-  1038

seq1  AGAACCAGAAAGCCTCTACAAGGAAAACACTAAGAAGAGAAAATGAAG-A  1098
      |||| ||| |||||||||||    |||||||||| |||  |||||||| |
seq2  AGAA-CAG-AAGCCTCTACA---GAAACACTAAG-AGAAGAAATGAAGAA  1082

seq1  TA-CTAGAATATGCAAAGACC-TCTCATGC  1126
      || ||||||||||| |||||| ||||||||
seq2  TACCTAGAATATGCCAAGACCTTCTCATGC  1112