BAC Information

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BAC

Clone NameB6Ng01-246G14
Chromosome17 (Build37)
Map Location 12,045,398 - 12,199,431
singlet/doubletdoublet
Overlap genePark2
Upstream geneLOC100041113
Downstream geneAgpat4, Tdgf1-ps2, Map3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246G14.bB6Ng01-246G14.g
ACCGA055032GA055033
length921831
definitionB6Ng01-246G14.b B6Ng01-246G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,198,512 - 12,199,431)(12,045,398 - 12,046,087)
sequence
gaattcctggaactgccatacaagcagggatcttaccctttatccacatg
gcttgaaacaattcctcatctactaaaggtgtttagtgtatattgctgaa
taaaataatacctttccactatgatgataccagaattcaatatgcatcta
tccaatgtaaatgcacaggttctgtattggacttggggatgcaaaaatgg
ataccggagaagagcaagaaagatgcttgtacctttgcccacaaatgtta
tcttccacaataatgtttaggaccactgtcaagagtctcgtgcctccttt
tgatgagctcaaaaccactttccatgactttcaaggaagtgttatacaaa
actacatatttgttgggcttggccagcatttatgttgatataattattga
ccctcttttagctctctcccatgactcttctctgagaggaaacacattcc
ttttgccagctagccaagcaggattcttgacatatacaaatgttccattt
atcatgcattgatagtatgatgggtatatgccctttgatgctggtcatat
gaactcctccatttaaatggcctaaatattaaggatataatgacttttaa
agaccttagaccaaggtgggatgttctctcttgaagagtgggtgaaatta
ctgtgggagtcatgtacttggacagtttaacggacaagtaaggtgatccc
tcattttcaagtgaagtctcacatcttgctgagctttggttcacatctgg
cgcactgacgaatgtaaagatgcttgtttagtcccactccgcagggcctc
ttacttttacgtctgcactgtaaggatctcaaggcatatattcgacgcta
ttagtattccctgctttctgtcccagtcatctccaattgagtatccctga
gcatgaaaataatgaacagaa
gaattccatatttcctccatgggcgaggacaccactacggggacctgagc
tcagacaaaaagtcagggatacaacattccagaggcacagagccctggtt
agtttttgacaacttgacatgaaccaaaattacctaacaagagaaaacct
caaatgaggaattacctctctcacactagcctgtggacatgtctatgggg
tgggcttttttttaaacattgctaattaatataaaagagcctagcccact
gtgaggggcacaatccctaggcaggtgggcctgaactatatctgaaaagc
ctctgagcaaggcagaggaagcaagccagtgagcagcattccctctgggc
ctctgcttcagttcatgcctccaggctcctgattgggtctgttttgagtc
tggtttccctagatgataggctgtgaccggcaagccaggtaaatccttgc
ttccaagagtttgttttggtcagtgtttttatcacggtgacacataaaca
cacagcagtctctatggggaacagcctagaactctgacagaaggggtctc
aggatctgctaccccaaaaggatactcagttaatgacctaagataagatg
gcttctagttgtccctaccccaaacccagacaagaaagaaaccccaaagg
catgggtgtgtggatttgcagtggcagtggaggagagggatggcgagttc
ttcaccttttttatttctacaggaatttttgggaattattgtgtactttt
tataattatttttcagtttctctcaacactacagaatatctgcttggaaa
ttttatataacttttatcttcttactgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_12198512_12199431
seq2: B6Ng01-246G14.b_44_964 (reverse)

seq1  TTCTGTTCATTTATTTCA-GCTCAGGGATACTCAAGTTCAAGATCACTGG  49
      |||||||||||  ||||| |||||||||||||||| ||  |||| |||||
seq2  TTCTGTTCATTATTTTCATGCTCAGGGATACTCAA-TTGGAGATGACTGG  49

seq1  GTACAGAAAACA-GGAATACTAATAGCCTTGGAACCCATGCCTTGAGATC  98
      | ||||||| || ||||||||||||| | | |||   |||||||||||||
seq2  G-ACAGAAAGCAGGGAATACTAATAG-CGTCGAATATATGCCTTGAGATC  97

seq1  TTTATAGTGCAGGACGATGAAGTAAGAGGCCCTGTGGAATGGGAATAAAC  148
       ||| |||||| ||||   ||||||||||||||| ||| ||||| |||||
seq2  CTTACAGTGCA-GACGTAAAAGTAAGAGGCCCTGCGGAGTGGGACTAAAC  146

seq1  AAGCA-GTTTACATTCATCAGTGCCCCAGATGTGAACCAAAGCTC-CCAA  196
      |||||  ||||||||| ||||||| ||||||||||||||||||||  |||
seq2  AAGCATCTTTACATTCGTCAGTGCGCCAGATGTGAACCAAAGCTCAGCAA  196

seq1  GATGTGAGATTCTACTTGAAAATGAGGGACAACCTTACTT-ACCCTTAAA  245
      ||||||||| |  ||||||||||||||||  |||||||||  || |||||
seq2  GATGTGAGACTTCACTTGAAAATGAGGGATCACCTTACTTGTCCGTTAAA  246

seq1  CTGACCAAGTTCCTGACTCCCACAGTAATTTCACCCACTCTTCAAGAGAG  295
      ||| |||||| | |||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAAGTACATGACTCCCACAGTAATTTCACCCACTCTTCAAGAGAG  296

seq1  AACATCCAACCTTGGTTTAAGGTCTTTAAAAGTCATTATAACCTTAATAT  345
      ||||||| |||||||| ||||||||||||||||||||||| |||||||||
seq2  AACATCCCACCTTGGTCTAAGGTCTTTAAAAGTCATTATATCCTTAATAT  346

seq1  CTAGGCCATATAAATGGAGGAGTTCATATGACCAGCATCAAAGGGCATAT  395
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCCATTTAAATGGAGGAGTTCATATGACCAGCATCAAAGGGCATAT  396

seq1  ACCCATCATACTATCAATGCATGCTAAATGGAACATTTGTATATGTCAAG  445
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACCCATCATACTATCAATGCATGATAAATGGAACATTTGTATATGTCAAG  446

seq1  AATCCTGCTTGGCTAGCTGGCAAAATGAATGTGTTTCCTCTCAGAGAAGA  495
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCCTGCTTGGCTAGCTGGCAAAAGGAATGTGTTTCCTCTCAGAGAAGA  496

seq1  GTCATGGGAGAGAGCTAAAAGAGGGTCAATAATTATATCAACATAAATGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGGAGAGAGCTAAAAGAGGGTCAATAATTATATCAACATAAATGC  546

seq1  TGGCCAAGCCCAACAAATATGTAGTTTTGTATAACACTTCCCTGAAAGTC  595
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGCCAAGCCCAACAAATATGTAGTTTTGTATAACACTTCCTTGAAAGTC  596

seq1  ATGGAAAGTGGTTCTGAGCTCATCAAAAGGAGGCACGAGACTCTTGACAG  645
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGTGGTTTTGAGCTCATCAAAAGGAGGCACGAGACTCTTGACAG  646

seq1  TGGTCCTAAACACTATTGTGGAAGATAACATTTGTGGGCAAAGGTACAAG  695
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTAAACATTATTGTGGAAGATAACATTTGTGGGCAAAGGTACAAG  696

seq1  CATCTTTCCTGCTCTTCTCCTGTATCCATTTTTGCATCCCCAAGTCCAAT  745
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  CATCTTTCTTGCTCTTCTCCGGTATCCATTTTTGCATCCCCAAGTCCAAT  746

seq1  ACAGAACCTGTGCATTTACATTGGATAGATGCATATTGAATTCTGGTATC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACCTGTGCATTTACATTGGATAGATGCATATTGAATTCTGGTATC  796

seq1  ATCATAGTGGAAAGGTATTATTTTATTCAGCAATATACACTAAACACCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGTGGAAAGGTATTATTTTATTCAGCAATATACACTAAACACCTT  846

seq1  TAGTAGATGAGGAATTGTTCCAAGCCCTGTGGATAAAGGGTAAGATCCCT  895
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TAGTAGATGAGGAATTGTTTCAAGCCATGTGGATAAAGGGTAAGATCCCT  896

seq1  GCTTGTATGGCAGTTCCATGAATTC  920
      |||||||||||||||||| ||||||
seq2  GCTTGTATGGCAGTTCCAGGAATTC  921

seq1: chr17_12045398_12046087
seq2: B6Ng01-246G14.g_70_759

seq1  GAATTCCAGATTTCCTCCATGGGCGAGGACACCACTACGGGGACCTGAGC  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTTCCTCCATGGGCGAGGACACCACTACGGGGACCTGAGC  50

seq1  TCAGACAAAAAGTCAGGGATACAACATTCCAGAGGCACAGAGCCCTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAAAAAGTCAGGGATACAACATTCCAGAGGCACAGAGCCCTGGTT  100

seq1  AGTTTTTGACAACTTGACATGAACCAGAATTACCTAAGAAGAGAAAACCT  150
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  AGTTTTTGACAACTTGACATGAACCAAAATTACCTAACAAGAGAAAACCT  150

seq1  CAAATGAGGAATTACCTCTCTCACACTAGCCTGTGGACATGTCTATGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGGAATTACCTCTCTCACACTAGCCTGTGGACATGTCTATGGGG  200

seq1  TGGGCTTTTTTTTAAACATTGCTAATTAATATAAAAGAGCCTAGCCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTTTTTTTAAACATTGCTAATTAATATAAAAGAGCCTAGCCCACT  250

seq1  GTGAGGGGCACAATCCCTAGGCAGGTGGGCCTGAACTATATCTGAAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGGCACAATCCCTAGGCAGGTGGGCCTGAACTATATCTGAAAAGC  300

seq1  CTCTGAGCAAGGCAGAGGAAGCAAGCCAGTGAGCAGCATTCCCTCTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCAAGGCAGAGGAAGCAAGCCAGTGAGCAGCATTCCCTCTGGGC  350

seq1  CTCTGCTTCAGTTCATGCCTCCAGGCTCCTGATTGGGTCTGTTTTGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCAGTTCATGCCTCCAGGCTCCTGATTGGGTCTGTTTTGAGTC  400

seq1  TGGTTTCCCTAGATGATAGGCTGTGACCGGCAAGCCAGGTAAATCCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCCTAGATGATAGGCTGTGACCGGCAAGCCAGGTAAATCCTTGC  450

seq1  TTCCAAGAGTTTGTTTTGGTCAGTGTTTTTATCACAGTGACACATAAACA  500
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCCAAGAGTTTGTTTTGGTCAGTGTTTTTATCACGGTGACACATAAACA  500

seq1  CACAGCAGTCTCTATGGGGAACAGCCTAGAACTCTGACAGAAGGGGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGTCTCTATGGGGAACAGCCTAGAACTCTGACAGAAGGGGTCTC  550

seq1  AGGATCTGCTACCCCAAAAGGATACTCAGTTAATGACCTAAGAGAAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGATCTGCTACCCCAAAAGGATACTCAGTTAATGACCTAAGATAAGATG  600

seq1  GCTTCTAGTTGTCCCTACCCCAAACCCAGACAAGAAAGAAACCCCAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTAGTTGTCCCTACCCCAAACCCAGACAAGAAAGAAACCCCAAAGG  650

seq1  CATGGGTGTGTGGATTTGCAGTGGCAGTGGAGGGGAGGGA  690
      ||||||||||||||||||||||||||||||||| ||||||
seq2  CATGGGTGTGTGGATTTGCAGTGGCAGTGGAGGAGAGGGA  690