BAC Information

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BAC

Clone NameB6Ng01-246M07
Chromosome17 (Build37)
Map Location 50,905,922 - 50,906,681
singlet/doubletsinglet
Overlap geneTbc1d5
Upstream geneKif6, EG668470, Rftn1, EG668475, EG628747, LOC100043818, Dazl, Plcl2, EG654432
Downstream geneLOC100043451, LOC100043452, Satb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246M07.bB6Ng01-246M07.g
ACCGA055291GA055292
length7611,176
definitionB6Ng01-246M07.b B6Ng01-246M07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttggaagctctcataggcctggtttccctgagtattctctaa
atcaggtgttatagctggcactcagcaaaaaattaggaataaattcgtgt
tcttaaaggttttgtgtgctgttcaagtacttggtatagcaggaatcagt
ctgacatattgctgagagataaggttcctataatcagcatggtggaaata
tggataactcagagaattttccctctcattttttcccaaaattttcataa
ctgttcgtatttatattaacaagaaacacatcacagtggttctgatactt
ggctcctattaccatttgtaacttaaggtgtttcttattccatttctgat
cctcaacttggattcaatgcagacttctatgggagtcatttactttagag
aatggtgatataagtgtcttaattcattctcatatggccaattatcttta
atacagtgaaacaaaaaaacaacaaaagcaaccttagccaaggtctttat
gtctgggtcagccattgtgttgggtgcctgcttctggtgccaggaagagc
tcacagatggtcttgcccagctccatgaaaaacttaaatgaaagcccctg
gcacagactgggcagttgcagtcgtttccctgtccagttacattagacag
tggcaggcctgtgattggacaggaaaagaaagggaggtggagctaggatt
aggggagacagagacctcacaggaggagaaagcaggggtggggatggggg
catgggggagg

gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaagcaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
gcattgcaagcttctacaaccttgcaatcaggaaatcagtctggtggttc
ctcagaaaattggacatagtactaccggaggatcccacaatacctctcct
gggcatatatccagaaaatgttccaaatggtaagaaggacacatgctcca
ctatgttcatagcagccttacttataatggccagaagctggaaagaaccc
agatgcccctcaacagaggaatggatacataaaatgtggtacatttacac
agtggagtactactcagctattaaaaagaatgaatttatgaaattcctag
gcaaatggatggacctggagggcatcatcctgagtgaggtaacccaatca
aaaaagaactcacatgatatgtactcactgataagtggacattagcccag
aaacttagaatacccaagatacaagatacaacctgcaaaacacatgaaac
tcaagaagaacaaagaccaaaatgtggacactttaccccttcttagaatt
gggaacaaaacacccatggaaggagttacagagacaatgtttggagctaa
gacgaaaggatggaccatctagagactgtcatacccggggatccatccca
taatcagcctccaaacgctgacaccattgcatacactagtaagattttgc
tgaaaggacccagatatagcagtctcttgtgaggctatgccgggggccta
gcaaacacataagtggatgctcacagtcagctattggatggatcacaggg
accccaatggaggagctagagaaagtacccaaggagctaaatgggtctgc
aactctataggtggaacacatatgacctacagttaccccccttacacaca
cactacgcactcactaccaacaacaacataccaacaacacaagttcggtt
tcctagctgcatattgtatcgagaatagcttagtaggcaatcattgaaag
aagagcccattggtctcttgtcagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_50905922_50906681
seq2: B6Ng01-246M07.b_51_811 (reverse)

seq1  CCTCCCCCATGCCCCCATCCCCACCCCTGC-TTCTCCTCCTGTGAGGTCT  49
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTCCCCCATGCCCCCATCCCCACCCCTGCTTTCTCCTCCTGTGAGGTCT  50

seq1  CTGTCTCCCCTAATCCTAGCTCCACCTCCCTTTCTTTTCCTGTCCAATCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCCTAATCCTAGCTCCACCTCCCTTTCTTTTCCTGTCCAATCA  100

seq1  CAGGCCTGCCACTGTCTAATGTAACTGGACAGGGAAACGACTGCAACTGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGCCACTGTCTAATGTAACTGGACAGGGAAACGACTGCAACTGC  150

seq1  CCAGTCTGTGCCAGGGGCTTTCATTTAAGTTTTTCATGGAGCTGGGCAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGTGCCAGGGGCTTTCATTTAAGTTTTTCATGGAGCTGGGCAAG  200

seq1  ACCATCTGTGAGCTCTTCCTGGCACCAGAAGCAGGCACCCAACACAATGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTGTGAGCTCTTCCTGGCACCAGAAGCAGGCACCCAACACAATGG  250

seq1  CTGACCCAGACATAAAGACCTTGGCTAAGGTTGCTTTTGTTGTTTTTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCAGACATAAAGACCTTGGCTAAGGTTGCTTTTGTTGTTTTTTTG  300

seq1  TTTCACTGTATTAAAGATAATTGGCCATATGAGAATGAATTAAGACACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGTATTAAAGATAATTGGCCATATGAGAATGAATTAAGACACTT  350

seq1  ATATCACCATTCTCTAAAGTAAATGACTCCCATAGAAGTCTGCATTGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACCATTCTCTAAAGTAAATGACTCCCATAGAAGTCTGCATTGAAT  400

seq1  CCAAGTTGAGGATCAGAAATGGAATAAGAAACACCTTAAGTTACAAATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTGAGGATCAGAAATGGAATAAGAAACACCTTAAGTTACAAATGG  450

seq1  TAATAGGAGCCAAGTATCAGAACCACTGTGATGTGTTTCTTGTTAATATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGAGCCAAGTATCAGAACCACTGTGATGTGTTTCTTGTTAATATA  500

seq1  AATACGAACAGTTATGAAAATTTTGGGAAAAAATGAGAGGGAAAATTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGAACAGTTATGAAAATTTTGGGAAAAAATGAGAGGGAAAATTCTC  550

seq1  TGAGTTATCCATATTTCCACCATGCTGATTATAGGAACCTTATCTCTCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATCCATATTTCCACCATGCTGATTATAGGAACCTTATCTCTCAG  600

seq1  CAATATGTCAGACTGATTCCTGCTATACCAAGTACTTGAACAGCACACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTCAGACTGATTCCTGCTATACCAAGTACTTGAACAGCACACAA  650

seq1  AACCTTTAAGAACACGAATTTATTCCTAATTTTTTGCTGAGTGCCAGCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTAAGAACACGAATTTATTCCTAATTTTTTGCTGAGTGCCAGCTA  700

seq1  TAACACCTGATTTAGAGAATACTCAGGGAAACCAGGCCTATGAGAGCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCTGATTTAGAGAATACTCAGGGAAACCAGGCCTATGAGAGCTTC  750

seq1  CAAATGAATTC  760
      |||||||||||
seq2  CAAATGAATTC  761


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