BAC Information

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BAC

Clone NameB6Ng01-257G22
Chromosome17 (Build37)7 (Build37)
Map Location 37,094,172 - 37,095,147109,808,910 - 109,808,990
singlet/doubletsingletsinglet
Overlap genePpp1r11, Znrd1
Upstream geneAbcf1, Prr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31
Downstream gene1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257G22.bB6Ng01-257G22.g
ACCGA063133GA063134
length977996
definitionB6Ng01-257G22.b B6Ng01-257G22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(37,094,172 - 37,095,147)(109,808,910 - 109,808,990)
sequence
gaattcaggacactgtcatatgttcgcgttgtggcttctccatcgatgtg
cgaggtaaggagctggtatgctcagccaagagtgcgggtggaagggtcta
cggtgggggtgacctcaggaccggttgggcttagcgaggtgagactgaga
acaggaatctgtcagcgagagacattgggaagaaaccgatgagacgcctg
ggagagtgttgctgggattcgttgcctcttttgctgtttctactgttatt
actttttacttcctgtgcagattgtgaagggaaggttgtgaagacctcag
tagtgttcaacaagctgggggctaccatacctttgtctgtggatgaggga
cctgaattacagggaccagtggtaagttaataggggccagctccgaaaga
gcaatggaaaggtgattctggacacctggttttgcactccattccaggag
aatgtccaaggagtctgatttctgtacagaaagcagagacaagaccaggt
ctccataacccttctgtctcttcctagattgacaggcgctgccctcgatg
tggtcacgagggaatggcatatcacaccagacagatgcgctcagctgatg
aaggacagacggtcttctatacctgtatcaactgcaagtgagaatatttc
ccctccctctgcccagttcagtgcttgcaaaacaacaaaatcaatgacag
atttgtattatttcatttggtccagtccattatagggggggtttgtagcc
ctttttattttttactatttacttttttttttttttttttggtttctctg
tgtagccctggctgtcctggcactcacttttgtagagaccaaggctggcc
tcggaactcagaaatccgcctgcctctgcctcccgagtgctgggattaaa
ggcgtgtgccaccacgcccggccttttttttggtttttattatttattta
tttaattattttatttttggttttttg
gaattcaattcccagcaaccacatggtggctcacaaccatctataatgag
atctgacaacttcttctggtgtgtctgaagacagctacagttcaacattc
ttaacatcagtgaaatgcaaagcaaaactactttgacatttcatcatata
cctgtcagaatatctaagatctataagacaggtgatagagtataacttta
attttttcaatgcctgcctttaaagatggtccataaatgttttagcctcc
cttctaatccatcacccaccagaagtagtgggaaggaaaggatatggggg
aagtaaacctgtttcaaaatggttctttggagtaaatcccatctgcattg
tcagaaaatcaacagttcagttcccagcatagcggaggcaactgaataca
cccacaaacaattcatggatattccagcagtccagtttggtagagtcaga
acagcaaacacaatcagcagcaatgaccctacctagcagaacaggcaggc
ctcggcctacttggcacaagtcagctggacaagggccaaccagaatgcca
ggaaaagttctctgcaacaaagtgaagaccagcaaagactcaagaccaac
acggtgcatagcactctacatgcaagccaaactctagtcacagtccattg
agtcctatttatactccctccaagcatcacatatcctccatggggcttcc
ctcaccacctgtcttaacagagcagtgagactctctcagctgacatcaat
ctgccaattaattggcctgagtacacagaagtagcaagaagctatcaaca
taccaggaaaagtttttttggtacatatctctctatgaagtcctgacaaa
aggagctcaactatacaatgtaaggcagaccaatgcatgcatgtcattag
caaagaatccatcacatattctttcatgtgcttgctttagcagaatattc
tttcacctgtatctgcttcagtgaaatgttccttcacatgtttgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37094172_37095147
seq2: B6Ng01-257G22.b_47_1022 (reverse)

seq1  AAAAAACCAAAAATAAAAATAAATAAATAAAAATAAATAAATAAAAACCA  50
      |||||||||||||| ||||||| |||||  |||||||| |||||||||||
seq2  AAAAAACCAAAAAT-AAAATAATTAAAT--AAATAAAT-AATAAAAACCA  46

seq1  AAAAAAAGGCCGGGCGTGGTGGCACACGCCTTTAATCCCAGCACTCGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGCCGGGCGTGGTGGCACACGCCTTTAATCCCAGCACTCGGGA  96

seq1  GGCAGAGGCAGGCGGATTTCTGAGTT-CGAGGCCAGCC-TGGTCTCTAC-  147
      |||||||||||||||||||||||||| ||||||||||| |||||||||| 
seq2  GGCAGAGGCAGGCGGATTTCTGAGTTCCGAGGCCAGCCTTGGTCTCTACA  146

seq1  AAAGTGAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCAAAAAAAAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCAAAAAAAAAA  196

seq1  AAAAAAAAGTAAATAGTAAAAAATAAAAAGGGCTACAAA-CCCCCCTATA  246
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAAAAAAGTAAATAGTAAAAAATAAAAAGGGCTACAAACCCCCCCTATA  246

seq1  ATGGACTGGACCAAATGAAATAATACAAATCTGTCATTGATTTTGTTGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTGGACCAAATGAAATAATACAAATCTGTCATTGATTTTGTTGTT  296

seq1  TTGCAAGCACTGAACTGGGCAGAGGGAGGGGAAATATTCTCACTTGCAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGCACTGAACTGGGCAGAGGGAGGGGAAATATTCTCACTTGCAGT  346

seq1  TGATACAGGTATAGAAGACCGTCTGTCCTTCATCAGCTGAGCGCATCTGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGGTATAGAAGACCGTCTGTCCTTCATCAGCTGAGCGCATCTGT  396

seq1  CTGGTGTGATATGCCATTCCCTCGTGACCACATCGAGGGCAGCGCCTGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGATATGCCATTCCCTCGTGACCACATCGAGGGCAGCGCCTGTC  446

seq1  AATCTAGGAAGAGACAGAAGGGTTATGGAGACCTGGTCTTGTCTCTGCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGGAAGAGACAGAAGGGTTATGGAGACCTGGTCTTGTCTCTGCTT  496

seq1  TCTGTACAGAAATCAGACTCCTTGGACATTCTCCTGGAATGGAGTGCAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACAGAAATCAGACTCCTTGGACATTCTCCTGGAATGGAGTGCAAA  546

seq1  ACCAGGTGTCCAGAATCACCTTTCCATTGCTCTTTCGGAGCTGGCCCCTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTGTCCAGAATCACCTTTCCATTGCTCTTTCGGAGCTGGCCCCTA  596

seq1  TTAACTTACCACTGGTCCCTGTAATTCAGGTCCCTCATCCACAGACAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTACCACTGGTCCCTGTAATTCAGGTCCCTCATCCACAGACAAAG  646

seq1  GTATGGTAGCCCCCAGCTTGTTGAACACTACTGAGGTCTTCACAACCTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTAGCCCCCAGCTTGTTGAACACTACTGAGGTCTTCACAACCTTC  696

seq1  CCTTCACAATCTGCACAGGAAGTAAAAAGTAATAACAGTAGAAACAGCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACAATCTGCACAGGAAGTAAAAAGTAATAACAGTAGAAACAGCAA  746

seq1  AAGAGGCAACGAATCCCAGCAACACTCTCCCAGGCGTCTCATCGGTTTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCAACGAATCCCAGCAACACTCTCCCAGGCGTCTCATCGGTTTCT  796

seq1  TCCCAATGTCTCTCGCTGACAGATTCCTGTTCTCAGTCTCACCTCGCTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGTCTCTCGCTGACAGATTCCTGTTCTCAGTCTCACCTCGCTAA  846

seq1  GCCCAACCGGTCCTGAGGTCACCCCCACCGTAGACCCTTCCACCCGCACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACCGGTCCTGAGGTCACCCCCACCGTAGACCCTTCCACCCGCACT  896

seq1  CTTGGCTGAGCATACCAGCTCCTTACCTCGCACATCGATGGAGAAGCCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGAGCATACCAGCTCCTTACCTCGCACATCGATGGAGAAGCCAC  946

seq1  AACGCGAACATATGACAGTGTCCTGAATTC  976
      ||||||||||||||||||||||||||||||
seq2  AACGCGAACATATGACAGTGTCCTGAATTC  976

seq1: chr7_109808910_109808990
seq2: B6Ng01-257G22.g_68_148 (reverse)

seq1  CTGTCTTCAGACACACCAGAAGAGGTCATCAGATCCCATTACAGATGGTT  50
      ||||||||||||||||||||||| ||  ||||||| ||||| ||||||||
seq2  CTGTCTTCAGACACACCAGAAGAAGTTGTCAGATCTCATTATAGATGGTT  50

seq1  GTGAGCCACCATGTGGTTGCTGGGATTTGAA  81
      ||||||||||||||||||||||||| |||||
seq2  GTGAGCCACCATGTGGTTGCTGGGAATTGAA  81