BAC Information

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BAC

Clone NameB6Ng01-260J06
Chromosome17 (Build37)
Map Location 38,308,181 - 38,309,338
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133
Downstream geneOlfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985, LOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260J06.bB6Ng01-260J06.g
ACCGA065464GA065465
length1,157657
definitionB6Ng01-260J06.b B6Ng01-260J06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcccagggaattttgtctaggcaatgaggacaagggtaaatg
agttgtccgtgaaaacaatgaacaggactcttgggaatagcaaagaaaca
tgatgacataaaagccttcttggtgttctctattatcatttccctaatgt
gagctttccctccttttggcttctttagtatgaactaaaaacctgagagt
tctgaagcaaatcttaaactatcaccttcatactagaatatccctgtcct
gtgaaaacgaaaaactgtaatatcttcccttgtaactatttttttaaaca
aataaagggagtttatcaaaataaggtaagtgagacacctgtatttccta
ggaaaaggatactgcagtcctagaaaaggtggaaagtgtgggctgcagta
tctaattagtacacaggaaagacagcttcatttcaaaaagcctttcataa
actttggctatacctatttcagtggttctaggaacaactagacttttaag
ttttaacacatttctttctcattctatcactgaagccaaaagaatcattt
aagtttctataagcaatatatttctcataggttgattacctgagagaagt
attaatgtttagccatttgatcatataaaaacatgtttaaaataagatta
atcttgtttatttgtttcatctaatgcttttgtgtatggtaaaattattt
tttaattaagggtgtttaaaactaaagacagctttttgcaacatacaaag
gccaaaatactgtaaatataagcaaaatggtgtgtgtcttatcaagcaga
atatgaatgtaatatgtttggtataaaaatgcaatttggcatatggacag
cattcaacagaaatacagcctgattttgatcagtgattttaaacactcct
ggatggatatatccctgtgagttgaaattgttgcatcactgaacaagaaa
attaaaggttctcttctttctcccattccagtccacctacaaaatctatt
ccattttccattcccagggaatattacgcatctgccttagaccatcctct
ttatctaacttctctgatctgtggatataagtgttattctttacctgaca
gttattatccagttattgtgaaatatagaatatcatgtttggctttctga
gtctgga
gaattcctgtatattgaaccatccctgggatgaaacctacttaatcatgg
tgaatgatcaatttgatgtgttttggattcagtttgggagaattttattg
agtatttttgcatcaaattataaaggaaattggtctgaagttctctttct
ttgttgggtgtttgtgtggattaggtataagtgtaattgtctcatagaac
aaattggatagtgttccttctgtttctattttgtataatagtttgaagag
tattggtattaggtcttctttgaaggtctgatagaattatgcactaaaac
catctggtcctggggttttggttgggagaattttaatgtctgttgctatt
tctttagggattatgggactgtttagataggttatctgattctgatttaa
ctttggtatttgttatctgtctagaaaattatccattttgttgagcatag
gcttttgtagtaggatcttaagattttttaaaatttcctcagtttccgtt
gttatgtctccctttttatatctgatttttattaatttggatactgactt
tgcgccctctggttagtttggctaagagtttatttatcttttttatattc
tcaaagaatctcctcctgttttgggttgatcctttgtatagttctttttg
tttacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38308181_38309338
seq2: B6Ng01-260J06.b_43_1199

seq1  GAATTCTTTCCCAGGGAATTTTGTCTAGGCAATGAGGACAAGGGTAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCAGGGAATTTTGTCTAGGCAATGAGGACAAGGGTAAATG  50

seq1  AGTTGTCCGTGAAAACAATGAACAGGACTCTTGGGAATAGCAAAGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCGTGAAAACAATGAACAGGACTCTTGGGAATAGCAAAGAAACA  100

seq1  TGATGACATAAAAGCCTTCTTGGTGTTCTCTATTATCATTTCCCTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACATAAAAGCCTTCTTGGTGTTCTCTATTATCATTTCCCTAATGT  150

seq1  GAGCTTTCCCTCCTTTTGGCTTCTTTAGTATGAACTAAAAACCTGAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTCCCTCCTTTTGGCTTCTTTAGTATGAACTAAAAACCTGAGAGT  200

seq1  TCTGAAGCAAATCTTAAACTATCACCTTCATACTAGAATATCCCTGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCAAATCTTAAACTATCACCTTCATACTAGAATATCCCTGTCCT  250

seq1  GTGAAAACGAAAAACTGTAATATCTTCCCTTGTAACTATTTTTTTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACGAAAAACTGTAATATCTTCCCTTGTAACTATTTTTTTAAACA  300

seq1  AATAAAGGGAGTTTATCAAAATAAGGTAAGTGAGACACCTGTATTTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGGAGTTTATCAAAATAAGGTAAGTGAGACACCTGTATTTCCTA  350

seq1  GGAAAAGGATACTGCAGTCCTAGAAAAGGTGGAAAGTGTGGGCTGCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGATACTGCAGTCCTAGAAAAGGTGGAAAGTGTGGGCTGCAGTA  400

seq1  TCTAATTAGTACACAGGAAAGACAGCTTCATTTCAAAAAGCCTTTCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTAGTACACAGGAAAGACAGCTTCATTTCAAAAAGCCTTTCATAA  450

seq1  ACTTTGGCTATACCTATTTCAGTGGTTCTAGGAACAACTAGACTTTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCTATACCTATTTCAGTGGTTCTAGGAACAACTAGACTTTTAAG  500

seq1  TTTTAACACATTTCTTTCTCATTCTATCACTGAAGCCAAAAGAATCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACACATTTCTTTCTCATTCTATCACTGAAGCCAAAAGAATCATTT  550

seq1  AAGTTTCTATAAGCAATATATTTCTCATAGGTTGATTACCTGAGAGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTATAAGCAATATATTTCTCATAGGTTGATTACCTGAGAGAAGT  600

seq1  ATTAATGTTTAGCCATTTGATCATATAAAAACATGTTTAAAATAAGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGTTTAGCCATTTGATCATATAAAAACATGTTTAAAATAAGATTA  650

seq1  ATCTTGTTTATTTGTTTCATCTAATGCTTTTGTGTATGGTAAAATTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTTATTTGTTTCATCTAATGCTTTTGTGTATGGTAAAATTATTT  700

seq1  TTTAATTAAGGGTGTTTAAAACTAAAGACAGCTTTTTGCAACATACAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAAGGGTGTTTAAAACTAAAGACAGCTTTTTGCAACATACAAAG  750

seq1  GCCAAAATACTGTAAATATAAGCAAAATGGTGTGTGTCTTATCAAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATACTGTAAATATAAGCAAAATGGTGTGTGTCTTATCAAGCAGA  800

seq1  ATATGAATGTAATATG-TTGGTATAAAAATGCAATTTGGCATATGGACAG  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATATGAATGTAATATGTTTGGTATAAAAATGCAATTTGGCATATGGACAG  850

seq1  CATTCAACAGAAATACAGCCTGATTTTGATCAGTGATTTTAAACACTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACAGAAATACAGCCTGATTTTGATCAGTGATTTTAAACACTCCT  900

seq1  GGATGGATATATCCCTGTGAGTTGAAATTGTTGCATCACTGAACAAGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGATATATCCCTGTGAGTTGAAATTGTTGCATCACTGAACAAGAAA  950

seq1  ATTAAAGGTTCTCTTCTTTCTCCCATTCCAGTCCACCTACAAAATCTATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTTCTCTTCTTTCTCCCATTCCAGTCCACCTACAAAATCTATT  1000

seq1  CCATTTTCCATTCCCAGGGAATATTACGCATCTGCCTTAGACCATTCCTC  1049
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCATTTTCCATTCCCAGGGAATATTACGCATCTGCCTTAGACCA-TCCTC  1049

seq1  TTTATCTAACTTCTCTGGATCTGTGGATTATAAGTGTTATTCTTTACTTG  1099
      |||||||||||||||| |||||||||| ||||||||||||||||||| ||
seq2  TTTATCTAACTTCTCT-GATCTGTGGA-TATAAGTGTTATTCTTTACCTG  1097

seq1  ACAGTTATTATCCAGTTATTGTTGAATATAG-ATATCATGTTTGCCTTTC  1148
      ||||||||||||||||||||||  ||||||| |||||||||||| |||||
seq2  ACAGTTATTATCCAGTTATTGTGAAATATAGAATATCATGTTTGGCTTTC  1147

seq1  TGAGTCTGGA  1158
      ||||||||||
seq2  TGAGTCTGGA  1157