BAC Information

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BAC

Clone NameB6Ng01-261A06
Chromosome17 (Build37)
Map Location 41,690,102 - 41,691,173
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433107, EG619517, Crisp2, Rhag, 9130008F23Rik, EG435528, Cenpq, Mut, Ldha-ps3, LOC627577
Downstream geneLOC627626
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261A06.bB6Ng01-261A06.g
ACCGA065790GA065791
length1,1801,074
definitionB6Ng01-261A06.b B6Ng01-261A06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaattcagtttggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaactgaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcctaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaatgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagacttccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccaggatgtagctgtctcttgtgagactatgccggggcctaggcaa
tacagaaatggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggattctgcaact
ctataggcggaaaacattatggaactaaccagtacccccggagctcttga
ctctagctgcatatgtgtcaaaggatggcctagtcggccatcactggaaa
gagaggccatggacatgcaaaccttttattgtccagtacaggggtaccgc
tagggccaaatatgcgagtgcgtctgatac

gaattcttttacagtcatgtaaagtatcacattcagaatcagcaaactga
tgggatgttttaatattatctgatgtggaattgactgaagcatctcttct
ttattttgctttcatttgtatgacatcaatacagtttgaaaggttgtaaa
ctattttggtgaatgtaaacatttgcagatatgttgattcatcctggctt
gactcgaggaacaataaatgatgatttagcaactgctttgattttaaaag
cattcgcaggggacaaaagttaaataaacacacacacttctatactatac
aaataatacagacttacttgtaaataaatggattaaaatgtacaaagttt
attattagaaactatagaaatgtcctctgtccactttgtcaaatttctac
aagcatacagacttaaaaccagaagaaattattttctcatatgactgtgg
cccatatttcaagattatgttgtctccaggtgtcacagccactgggtatt
catgagcagtgcctctctccttgttccaagcttctgatattacatatatt
cctttattgaaggaatctactctgatctctgcctgtgtcctgttgtggtc
ttctccttgtcttgttctgtgttttatctgatcctctaaatcctttcaat
gaaatataagacctgcctcaaaaattaagccaccatattctaaatataac
cacatttataatgtttcctaagtgtaggtgtattcatgttagtaactcat
attttcctgagtttattgttttactcataaaggtattatttttatgtcat
tgtaagtttggattaaaatctgatttttctgtgcccatggtaatgaaata
gctcatgctgtttcttaattatttgatcaagcaactcgtatctttagtaa
acacaatttttagtaaacatgcaagactgctagaaactacattgtttagc
cctacactggaccaaaccaatcttattcagtaaatatgatttttagcata
agccaatgaaaatgatcctttgttgcagctatggctcaagataatgtcaa
cctaacattgttctatggccgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_41690102_41691173
seq2: B6Ng01-261A06.g_68_1141

seq1  GAATTCTTTTACAGTCATGTAAAGTATCACATTCAGAATCAGCAAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACAGTCATGTAAAGTATCACATTCAGAATCAGCAAACTGA  50

seq1  TGGGATGTTTTAATATTATCTGATGTGGAATTGACTGAAGCATCTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGTTTTAATATTATCTGATGTGGAATTGACTGAAGCATCTCTTCT  100

seq1  TTATTTTGCTTTCATTTGTATGACATCAATACAGTTTGAAAGGTTGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCTTTCATTTGTATGACATCAATACAGTTTGAAAGGTTGTAAA  150

seq1  CTATTTTGGTGAATGTAAACATTTGCAGATATGTTGATTCATCCTGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGGTGAATGTAAACATTTGCAGATATGTTGATTCATCCTGGCTT  200

seq1  GACTCGAGGAACAATAAATGATGATTTAGCAACTGCTTTGATTTTAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCGAGGAACAATAAATGATGATTTAGCAACTGCTTTGATTTTAAAAG  250

seq1  CATTCGCAGGGGACAAAAGTTAAATAAACACACACACTTCTATACTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGCAGGGGACAAAAGTTAAATAAACACACACACTTCTATACTATAC  300

seq1  AAATAATACAGACTTACTTGTAAATAAATGGATTAAAATGTACAAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATACAGACTTACTTGTAAATAAATGGATTAAAATGTACAAAGTTT  350

seq1  ATTATTAGAAACTATAGAAATGTCCTCTGTCCACTTTGTCAAATTTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGAAACTATAGAAATGTCCTCTGTCCACTTTGTCAAATTTCTAC  400

seq1  AAGCATACAGACTTAAAACCAGAAGAAATTATTTTCTCATATGACTGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATACAGACTTAAAACCAGAAGAAATTATTTTCTCATATGACTGTGG  450

seq1  CCCATATTTCAAGATTATGTTGTCTCCAGGTGTCACAGCCACTGGGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTCAAGATTATGTTGTCTCCAGGTGTCACAGCCACTGGGTATT  500

seq1  CATGAGCAGTGCCTCTCTCCTTGTTCCAAGCTTCTGATATTACATATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCAGTGCCTCTCTCCTTGTTCCAAGCTTCTGATATTACATATATT  550

seq1  CCTTTATTGAAGGAATCTACTCTGATCTCTGCCTGTGTCCTGTTGTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTGAAGGAATCTACTCTGATCTCTGCCTGTGTCCTGTTGTGGTC  600

seq1  TTCTCCTTGTCTTGTTCTGTGTTTTATCTGATCCTCTAAATCCTTTCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTGTCTTGTTCTGTGTTTTATCTGATCCTCTAAATCCTTTCAAT  650

seq1  GAAATATAAGACCTGCCTCAAAAATTAAGCCACCATATTCTAAATATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAAGACCTGCCTCAAAAATTAAGCCACCATATTCTAAATATAAC  700

seq1  CACATTTATAATGTTTCCTAAGTGTAGGTGTATTCATGTTAGTAACTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTATAATGTTTCCTAAGTGTAGGTGTATTCATGTTAGTAACTCAT  750

seq1  ATTTTCCTGAGTTTATTGTTTTACTCATAAAGGTATTATTTTTATGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGAGTTTATTGTTTTACTCATAAAGGTATTATTTTTATGTCAT  800

seq1  TGTAAGTTTGGATTAAAATCTGATTTTTCTGTGCCCATGGTAATG-AATA  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTAAGTTTGGATTAAAATCTGATTTTTCTGTGCCCATGGTAATGAAATA  850

seq1  GCTCATGCTGTTTCTTAATTTATTTGATCAAGCAACTCGTATCTTTAGTA  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTCATGCTGTTTCTTAA-TTATTTGATCAAGCAACTCGTATCTTTAGTA  899

seq1  AACACAA-TTTTAGTAAACATGCAAGACTGCTAGAAACTACAT--GTTAG  946
      ||||||| |||||||||||||||||||||||||||||||||||   ||||
seq2  AACACAATTTTTAGTAAACATGCAAGACTGCTAGAAACTACATTGTTTAG  949

seq1  CCCTACACTGGACCAAACCAATCT--ATCAGTAAATATGATTTTTAGCAT  994
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  CCCTACACTGGACCAAACCAATCTTATTCAGTAAATATGATTTTTAGCAT  999

seq1  AAGCCAATGAAAATGATCCCTTTGTGGCAGCTATGGCTCCAAGGATAATG  1044
      ||||||||||||||||| ||||||| |||||||||||||  | |||||||
seq2  AAGCCAATGAAAATGAT-CCTTTGTTGCAGCTATGGCTC--AAGATAATG  1046

seq1  TCAACCTAACATTGTTCTATGCCCGTGA  1072
      ||||||||||||||||||||| ||||||
seq2  TCAACCTAACATTGTTCTATGGCCGTGA  1074


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