BAC Information

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BAC

Clone NameB6Ng01-263G02
Chromosome17 (Build37)
Map Location 31,900,849 - 31,901,683
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc8, Glp1r, Umodl1, Abcg1, Tff3, Tff2, LOC100042904, Tff1, Tmprss3, Ubash3a, LOC100042906, Tsga2, EG667056, Slc37a1, Pde9a, Wdr4, 1500032D16Rik, Pknox1, Cbs, LOC623242, U2af1, Cryaa
Downstream geneSnf1lk, Hsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263G02.bB6Ng01-263G02.g
ACCGA067564GA067565
length842535
definitionB6Ng01-263G02.b B6Ng01-263G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagctgatgaagagtgtgaccttgttggagtgggtgtggcctt
gttggaggaagtatgtcactatggtagtgggctttgaggtctcctatgct
caagttacacccagtgtgccacacagtctccttctgctgcctggatcaag
atgtagaactctcagcttcttctccagaatcatgtctgctttcaattcac
catgtttcctgacatgatgataatggactaagcctctgaaaccataatcc
atacccaagtgtttttctttataagagttgctctggtcatggtgtctctt
catagccataaaaccctaagaacagaagtatccactgacggccaagacta
gaggtccagacactcactagcaaagcctatgactgtcccagggtctgcct
ccaactgctgcaccttctgatagtgcccttcaacatggtgccgccatata
gaaggcagaaaaagtcatctccttgctcatcacccttccctggtcatgtc
ttgcctctgcctcagcacctcaagtgtcctcctttgaaggtatgctagct
gaggtccctgtagaaattggggtggtttttggtcacacttgtatctttgt
cccaccatgctctgactggggccactgatgatgaccaagtcctagtgacc
tcatggctttactgtcctaccacaagtatctttggaaattagactgcgtt
gatggtgatcctgtgggctgcaccagatgggggagcactcaggacacttt
ttccccacaggatgcaaacacatttcagaatcaccccccctctagcaact
catgggaactccagtacaaggtcccaaaggtgaagacacact
ttgatctttccaagacttttatcatgaattggattctgtcaaatgctttt
tctgcatctaacaagatgatcatgtggtttttgtctttgagtttgtttat
atagtggattgcattgatggatttccatatattattcctgcattcctagg
atgaaccctacttgatcatgatggatgaccattttgatgtgttcttggat
ttggtttgcgagaattttattgagtattttggcactgatattcataaggg
aaattggtctgaagttctctttctttgttgggtctttatgtggtttaggt
atcagagtaattgtggcttcatagaatgaattgggtagagtaccttctgt
ttctattttgtggaatagtttgaggagaattggaattaggtcttctttga
aggtctgaaaagaactctgcactaaacccatctggtcctgggcttttttt
tttttttttttttttttttttgggttaggagatgattaaatgacctgctt
cttttttccttaagggaaaatggggacttgtttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_31900849_31901683
seq2: B6Ng01-263G02.b_44_881

seq1  GAATTCTTAGCTGATGAAGAGTGTGACCTTGTTGGAGTGGGTGTGGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCTGATGAAGAGTGTGACCTTGTTGGAGTGGGTGTGGCCTT  50

seq1  GTTGGAGGAAGTATGTCACTATGGTAGTGGGCTTTGAGGTCTCCTATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGGAAGTATGTCACTATGGTAGTGGGCTTTGAGGTCTCCTATGCT  100

seq1  CAAGTTACACCCAGTGTGCCACACAGTCTCCTTCTGCTGCCTGGATCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTACACCCAGTGTGCCACACAGTCTCCTTCTGCTGCCTGGATCAAG  150

seq1  ATGTAGAACTCTCAGCTTCTTCTCCAGAATCATGTCTGCTTTCAATTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAACTCTCAGCTTCTTCTCCAGAATCATGTCTGCTTTCAATTCAC  200

seq1  CATGTTTCCTGACATGATGATAATGGACTAAGCCTCTGAAACCATAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCCTGACATGATGATAATGGACTAAGCCTCTGAAACCATAATCC  250

seq1  ATACCCAAGTGTTTTTCTTTATAAGAGTTGCTCTGGTCATGGTGTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAAGTGTTTTTCTTTATAAGAGTTGCTCTGGTCATGGTGTCTCTT  300

seq1  CATAGCCATAAAACCCTAAGAACAGAAGTATCCACTGACGGCCAAGACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCATAAAACCCTAAGAACAGAAGTATCCACTGACGGCCAAGACTA  350

seq1  GAGGTCCAGACACTCACTAGCAAAGCCTATGACTGTCCCAGGGTCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCAGACACTCACTAGCAAAGCCTATGACTGTCCCAGGGTCTGCCT  400

seq1  CCAACTGCTGCACCTTCTGATAGTGCCCTTCAACATGGTGCCGCCATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGCTGCACCTTCTGATAGTGCCCTTCAACATGGTGCCGCCATATA  450

seq1  GAAGGCAGAAAAAGTCATCTCCTTGCTCATCACCCTTCCCTGGTCATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGAAAAAGTCATCTCCTTGCTCATCACCCTTCCCTGGTCATGTC  500

seq1  TTGCCTCTGCCTCAGCACCTCAAGTGTCCTCCTTTGAAGGTATGCTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGCCTCAGCACCTCAAGTGTCCTCCTTTGAAGGTATGCTAGCT  550

seq1  GAGGTCCCTGTAGAAATTGGGGTGGTTTTTGGTCACACTTGTATCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCTGTAGAAATTGGGGTGGTTTTTGGTCACACTTGTATCTTTGT  600

seq1  CCCACCATGCTCTGACTGGGGCCACTGATGATGACCAAGTCCTAGTGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATGCTCTGACTGGGGCCACTGATGATGACCAAGTCCTAGTGACC  650

seq1  TCATGGCTTTACTGTCCTACCACAAGTATC-TTGGAAATTAGACTGCGTT  699
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCATGGCTTTACTGTCCTACCACAAGTATCTTTGGAAATTAGACTGCGTT  700

seq1  GATGGTGATCCTGT-GGCTGCACCAGAT-GGGGAGCACTCAGGACAC-AT  746
      |||||||||||||| ||||||||||||| ||||||||||||||||||  |
seq2  GATGGTGATCCTGTGGGCTGCACCAGATGGGGGAGCACTCAGGACACTTT  750

seq1  TTCCCCACAGGATGCAAACACATTTCAGAATCAACCCCACCTCTAGCAGC  796
      |||||||||||||||||||||||||||||||| ||||| ||||||||| |
seq2  TTCCCCACAGGATGCAAACACATTTCAGAATC-ACCCCCCCTCTAGCAAC  799

seq1  TCATGGGAACTCCAGTACAAGGTTCCCAAGGTGATGACA  835
      ||||||||||||||||||||||| || ||||||| ||||
seq2  TCATGGGAACTCCAGTACAAGGTCCCAAAGGTGAAGACA  838