BAC Information

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BAC

Clone NameB6Ng01-265D06
Chromosome17 (Build37)
Map Location 84,085,480 - 84,086,069
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3
Downstream geneMta3, Haao, Zfp36l2, Thada, Plekhh2, Dync2li1, Abcg5, Abcg8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265D06.bB6Ng01-265D06.g
ACCGA068914GA068915
length5841,095
definitionB6Ng01-265D06.b B6Ng01-265D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttcagagagttaagaggagtgctaactgttttggtgaagaaaaaaaatgg
agaaagttgggtgtggctgcctttggtcctggcacttagcaggcagaggt
aagtggatctctgtgagttcgaggccaacctggcctcaaaagtaactaag
atgttaaaaaacaaaacaaagccgggcatggtggcacacgcctgtaatcc
cagcattcaggaggcagaggcaggtgaatttctgagttcgaggtcagcct
ggtctacaaagtgagttccaggacaaccagggctatacagagaaaccctg
tctcgaaaaaacaaaaacaaacaaacaaacaaacaacccaaaaccaaacc
aaaacacacacatcatcactaacagcaaaccaaccctctacttcccagca
aaagaaagataaatctaccaattcttaccctctggctgtcttccaggctt
gaataactactttctcaagtgctgtacctataagttaagtaactaaatct
attaggagcccacaaatattcatctcttctcttcttgacaagaattgtgt
aggaacttgtaactttaattttttttaaacctat
gaattcactcttgtagttcaggctgaccacaaactcacagaaatccattc
atgtctgcttcccagttgctggaattaaaggcatgcatcaccactgccta
gtcacatgagcactctaagacaccagagagaaaccaaaaggcttttatga
cctaccctcagaagtcatatagcgtcatggtcactgcttctgtggatcca
aagtacgtcacagagatttaaaaatttaaagagatttaaaggagtggacc
agacaggtagctaatagcaataaaagctattcagtgtgggggtagggggt
gcatatttaaagaccaattacccatgatctggccttaatgaatcactttc
cactaatgtgcaaatacaagacccccaagtcctcagccattaaacaccct
cagactcaggttcccccaaaaaaggcacaagcatctaagtgggggtacag
gtgcctctgtacctgaagaaacttcaggtatggttcttcttgctcctaag
actcatgagctaagagacaagttgttttcttatgcccaacacgcaacagt
gagggaagtacaacaacagcagtaggtgctcatctcacaaaaggaaaagg
atttagagcaagcctgcaaccgagttacacgtatacctccaactccttca
ttaggcctgcttcttacctccaggagttttttcttggctccaatctctta
attattgtgctggttagatttctgtcaatttgacacagattggagtcatc
tgggaagacagaatctcagtggaggaactgcataaatcagattggcccac
tgtggccgtttgaatatgcttggctcagagagtaagactattaggaggta
aggccttgttagagtgagtgtggcctggttagagggaagtgtgttactgt
ggggggtgggcatgagactcttcttctaaccacgtgggagcaagtcttct
atcagtcttcagaatctcctgcacaatgcttgcctggacactgccatgct
cagtcttgataacgatggattggatctctgaatctatcggaccaactaga
tgtcatcctatagaatttgccaagccatgtggatctggttcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_84085480_84086069
seq2: B6Ng01-265D06.b_49_638

seq1  GAATTCTTCAGAGAGTTAAGAGGAGTGCTAACTGTTTTGGTGAAGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAGAGTTAAGAGGAGTGCTAACTGTTTTGGTGAAGAAAAA  50

seq1  AAATGGAGAAAGTTGGGTGTGGCTGCCTTTGGTCCTGGCACTTAGCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAAAGTTGGGTGTGGCTGCCTTTGGTCCTGGCACTTAGCAGGC  100

seq1  AGAGGTAAGTGGATCTCTGTGAGTTCGAGGCCAACCTGGCCTCAAAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAGTGGATCTCTGTGAGTTCGAGGCCAACCTGGCCTCAAAAGTA  150

seq1  ACTAAGATGTTAAAAAACAAAACAAAGCCGGGCATGGTGGCACACGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATGTTAAAAAACAAAACAAAGCCGGGCATGGTGGCACACGCCTG  200

seq1  TAATCCCAGCATTCAGGAGGCAGAGGCAGGTGAATTTCTGAGTTCGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCATTCAGGAGGCAGAGGCAGGTGAATTTCTGAGTTCGAGGT  250

seq1  CAGCCTGGTCTACAAAGTGAGTTCCAGGACAACCAGGGCTATACAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAAAGTGAGTTCCAGGACAACCAGGGCTATACAGAGAA  300

seq1  ACCCTGTCTCGAAAAAACAAAAACAAACAAACAAACAAACAACCCAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCGAAAAAACAAAAACAAACAAACAAACAAACAACCCAAAAC  350

seq1  CAAACCAAAACACACACATCATCACTAACAGCAAACCAACCCTCTACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAAAACACACACATCATCACTAACAGCAAACCAACCCTCTACTTC  400

seq1  CCAGCAAAAGAAAGATAAATCTACCAATTCTTACCCTCTGGCTGTCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAAAGAAAGATAAATCTACCAATTCTTACCCTCTGGCTGTCTTCC  450

seq1  AGGCTTGAATAACTACTTTCTCAAGTGCTGTACCTATAAGTTAAGTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGAATAACTACTTTCTCAAGTGCTGTACCTATAAGTTAAGTAACT  500

seq1  AAATCTATTAGGAGCCCACAAATATTCATCTCTTCTCTTCTTGACAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATTAGGAGCCCACAAATATTCATCTCTTCTCTTCTTGACAAGAA  550

seq1  TTGTGTAGGAACTTGTAACTTTAATTTTTTTTAAACCTAT  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGGAACTTGTAACTTTAATTTTTTTTAAACCTAT  590