BAC Information

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BAC

Clone NameB6Ng01-265N20
Chromosome17 (Build37)
Map Location 93,203,792 - 93,204,909
singlet/doubletsinglet
Overlap genenone
Upstream geneEG640442, LOC627395, LOC676141, LOC668877
Downstream geneLOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265N20.bB6Ng01-265N20.g
ACCGA069403GA069404
length1,1181,182
definitionB6Ng01-265N20.b B6Ng01-265N20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagttagctctgagccacatttttaatggggttatttgtttt
tctggagtccaccgtcttgagttctttatatatattggatattagccccc
tgtctgatttaggataggtaaagatcctttcccaatctgttggttgcctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaattttat
gacgtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tattcaggaattttaagtgaaactttcatagcagattttctgttgatctg
gcgcctatattcttgatgtttctttccccagccatagacacagaagttga
gttgtgtatgcatacattgtcgttgggttccccaatacctgattataaca
gatttataccatgttgtagttttctgtgatggtatcattcaatgctgact
tgcacactcccagcaggctagtttttttctttaattttcttagaaaaagt
gataatagttgaaataaaagttcttgttttgatgaaaataattagtaata
acaaatgaaatattttgatagaaaaaataacttagataagatgaaaaatg
agtgcttagacaaaaatagaaaaagaatgcaattctgtcaatgacttttc
ccccatatccaaacctaatcataaatatgattattagggtactttaaaat
gatgatccagtgttactttgcagccaagattaatggccactgttctatgg
aatttagttaatcaactttcttcccacaatatataatacaaacctgggga
tgatgatattatccagttatgtagagtgagatatgaaatatattctttct
ttaacaatgtttgtgggaatggtgtttccctctcacacataatgggcctg
cattgcaacattccttggcccatttcatctgccttatatgaggatattat
agatgaaactgttgtaattatccccctcttgttttggaaaggtagaatga
caaaggtaacactacaggcacacaaacaagacaaaaaaatttagaaatag
tcagtagaatatcattgtatagctgagtccatggacaaaaataacctgca
tacctccacatttttcta

gaattccacagaaaactgccaacccagaccagtcagtgaagagttataga
agcagtgtgggaatgtgtgggcagagtgacataaagatctcattctcttg
aggctgaataaaggtcaggatagaaaaatgtaatggtggcaaatatctgt
gagtaccaagtctgagttttagtttagggcaggagagatttcctgttgct
ttgttaatgcagcactttaaggtacagcaattacaataaaattacctgct
taaagaagagggacttgaaactgtagctacagtaaaaagaatttatgcca
tagacaaattgccgaaatgcaaggtcaaaataattaacaaacttgacaaa
gaaacttaaggatgagaactctcacccaacccaaggttggatttgtttct
ctgagtctttcaaagaattatacttagtgaaagaaaaaaaaaaggaaaca
aaaacaaacttcaagaaagaacaaaatgtagtaactagccatgtaaatct
ttgttgtcttttgatctctacaatgtttttgatctcaaacaatgaaggaa
aaggtagtttgtagaaggaagcatccatgcttgaaaataatgtctacttg
agtggcagaaaaagtgaggaatcagagaagatttgacagaataggatatg
cccaattctcaggagtaaatagaagaaaggtaaactacttaagagtgagc
agacagtacaggaagaagagagtacagtatgagaatacaatataatttat
gaagagcaatgcaatagatgcgagaggtagaatagagcagcctaaagatg
gagcagaaaggcagttttactggcagagttttagagagacagtttaaaga
gagaagccgaaaagagaagccaaattgagtaagtcaggtagaagaggagt
ttgagccacagagttgagatcaaccaaccaaccagttatagttcaaaagg
aacaagtagacgtgagctttattctgcagtaagtctcagaagttagatca
ttctatacctagataaggttgtatggagcctggaagttccatgactaggt
caattcttaactgagaagaaagcctcctagataacatacaacaggaaaat
acaagttgctttataaaatattaaatactaagcacatcaatcgtaactgc
catataattcaacactgcctgtcgaagggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_93203792_93204909
seq2: B6Ng01-265N20.b_46_1163

seq1  GAATTCTTTAGTTAGCTCTGAGCCACATTTTTAATGGGGTTATTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTTAGCTCTGAGCCACATTTTTAATGGGGTTATTTGTTTT  50

seq1  TCTGGAGTCCACCGTCTTGAGTTCTTTATATATATTGGATATTAGCCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCACCGTCTTGAGTTCTTTATATATATTGGATATTAGCCCCC  100

seq1  TGTCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTTGCCTT  150

seq1  TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTAT  200

seq1  GACGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC  250

seq1  TATTCAGGAATTTTAAGTGAAACTTTCATAGCAGATTTTCTGTTGATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGAATTTTAAGTGAAACTTTCATAGCAGATTTTCTGTTGATCTG  300

seq1  GCGCCTATATTCTTGATGTTTCTTTCCCCAGCCATAGACACAGAAGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTATATTCTTGATGTTTCTTTCCCCAGCCATAGACACAGAAGTTGA  350

seq1  GTTGTGTATGCATACATTGTCGTTGGGTTCCCCAATACCTGATTATAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTATGCATACATTGTCGTTGGGTTCCCCAATACCTGATTATAACA  400

seq1  GATTTATACCATGTTGTAGTTTTCTGTGATGGTATCATTCAATGCTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATACCATGTTGTAGTTTTCTGTGATGGTATCATTCAATGCTGACT  450

seq1  TGCACACTCCCAGCAGGCTAGTTTTTTTCTTTAATTTTCTTAGAAAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTCCCAGCAGGCTAGTTTTTTTCTTTAATTTTCTTAGAAAAAGT  500

seq1  GATAATAGTTGAAATAAAAGTTCTTGTTTTGATGAAAATAATTAGTAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAGTTGAAATAAAAGTTCTTGTTTTGATGAAAATAATTAGTAATA  550

seq1  ACAAATGAAATATTTTGATAGAAAAAATAACTTAGATAAGATGAAAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAAATATTTTGATAGAAAAAATAACTTAGATAAGATGAAAAATG  600

seq1  AGTGCTTAGACAAAAATAGAAAAAGAATGCAATTCTGTCAATGACTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTAGACAAAAATAGAAAAAGAATGCAATTCTGTCAATGACTTTTC  650

seq1  CCCCATATCCAAACCTAATCATAAATATGATTATTAGGGTACTTTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATCCAAACCTAATCATAAATATGATTATTAGGGTACTTTAAAAT  700

seq1  GATGATCCAGTGTTACTTTGCAGCCAAGATTAATGGCCACTGTTCTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCCAGTGTTACTTTGCAGCCAAGATTAATGGCCACTGTTCTATGG  750

seq1  AATTTAGTTAATCAACTTTCTTCCCACAATATATAATACAAACCTGGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTTAATCAACTTTCTTCCCACAATATATAATACAAACCTGGGGA  800

seq1  TGATGATATTATCCAGTTATGTAGAGTGAGATATGAAATATATTC-TTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGATGATATTATCCAGTTATGTAGAGTGAGATATGAAATATATTCTTTCT  850

seq1  TTAACAATGTTTGTGGGAATGGTGTTTCCCTCTCACACATAATGGGCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATGTTTGTGGGAATGGTGTTTCCCTCTCACACATAATGGGCCTG  900

seq1  CATTGCAACATTCCTTGGCCCATTTCATCTGCCTTATATGAGGATATTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAACATTCCTTGGCCCATTTCATCTGCCTTATATGAGGATATTAT  950

seq1  AGATGAAACTGTTGTAATTAT-CCCCTCTGTTTTGGGAAAGGTAGAATGA  998
      ||||||||||||||||||||| |||||||  ||| |||||||||||||||
seq2  AGATGAAACTGTTGTAATTATCCCCCTCTTGTTTTGGAAAGGTAGAATGA  1000

seq1  CAAAAGGTAACACTACAGGCACAACAAAACAAGACAAAAAAA-TTAGAAT  1047
      | |||||||||||||||||||||   |||||||||||||||| |||||| 
seq2  C-AAAGGTAACACTACAGGCACA--CAAACAAGACAAAAAAATTTAGAAA  1047

seq1  AAGTCAGTAGATAATCATTGTTATTAGCTGAGTCAAT-GACAAAAATAAC  1096
       ||||||||||  ||||||||   |||||||||| || ||||||||||||
seq2  TAGTCAGTAGAATATCATTGT--ATAGCTGAGTCCATGGACAAAAATAAC  1095

seq1  TGGCAATACT-CACATTTTTCTA  1118
        |||   || ||||||||||||
seq2  CTGCATACCTCCACATTTTTCTA  1118


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