BAC Information

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BAC

Clone NameB6Ng01-266C04
Chromosome17 (Build37)
Map Location 36,368,056 - 36,368,299
singlet/doubletsinglet
Overlap geneLOC677333
Upstream geneNfkbil1, Atp6v1g2, Bat1a, H2-D1, H2-Q1, EG667636, LOC100043066, H2-Q2, EG625285, LOC436493, H2-Q8, EG667662, H2-Q6, H2-Q7, EG667669, H2-Q10, Pou5f1, Tcf19, Cchcr1, Psors1c2, Cdsn, LOC674169, 2300002M23Rik, LOC672682, Dpcr1, EG433102, Vars2, Gtf2h4, Ddr1, LOC100043663, Ier3, Flot1, Tubb5, Mdc1, Nrm, 2310014H01Rik, Dhx16, 2310061I04Rik, 2610110G12Rik, Mrps18b, LOC100043673, Ppp1r10, LOC100043674, LOC667766, Abcf1, Prr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525
Downstream geneLOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266C04.bB6Ng01-266C04.g
ACCGA069607GA069608
length1,152244
definitionB6Ng01-266C04.b B6Ng01-266C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatgtcagagaagcacctgaaaaattg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttctaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaatactgaagtgtggacactatgcccctccttagaattgggaa
cataacacccatggaaggagttacagagacaaagtttgaagctgagatga
aaggatggaccatgtggagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcaccgtcatctaatggatggatcacagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcacctat
agtggacacattatgactaccagtacccgagctctgactctagctgcata
gtatcaaagatgctagtcgcatcactgaagagagccatgaaccgcaactt
tatatgcccagtacagggacgcaggtcaaatggcactgtttgcttaggca
ta
tgtaagaacagctgccaggtgtggtggagcgcgcctttaatcccagcact
tgggaagcagaagcaggtggatttctgagtttgaggccagcctggtctac
agagacagcatccggccgcactggagtacgagtcggggaacggtctcaga
ggtccccgagaggccggggggaggggagggcggcgggggtggaggatctt
actcacacgcgagccccgggacgcacaattcacagacgacgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_36368056_36368299
seq2: B6Ng01-266C04.g_73_316

seq1  TGTAAGAACAGCTGCCAGGTGTGGTGGAGCGCGCCTTTAATCCCAGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAACAGCTGCCAGGTGTGGTGGAGCGCGCCTTTAATCCCAGCACT  50

seq1  TGGGAAGCAGAAGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCAGAAGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC  100

seq1  AGAGACAGCATCCGGCCGCACTGGAGTACGAGTCGGGGAACGGTCTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGCATCCGGCCGCACTGGAGTACGAGTCGGGGAACGGTCTCAGA  150

seq1  GGTCCCCGAGAGGCCGGGGGGAGGGGAGGGCGGCGGGGGTGGAGGATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCGAGAGGCCGGGGGGAGGGGAGGGCGGCGGGGGTGGAGGATCTT  200

seq1  ACTCACACGCGAGCCCCGGGACGCACAATCCACAGACGACGGGT  244
      ||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTCACACGCGAGCCCCGGGACGCACAATTCACAGACGACGGGT  244