BAC Information

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BAC

Clone NameB6Ng01-269N03
Chromosome17 (Build37)
Map Location 59,094,764 - 59,095,794
singlet/doubletsinglet
Overlap gene2610034M16Rik
Upstream geneCntnap5c, LOC620408, EG545216, LOC668648
Downstream geneNudt12, 4930505H01Rik, LOC100043537, LOC100043542
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269N03.bB6Ng01-269N03.g
ACCGA072317GA072318
length7161,043
definitionB6Ng01-269N03.b B6Ng01-269N03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagagaaatcttgaatgaccaagaaatacttaaagaaata
cttaacatccttagtcatcagggaaatgcaaatcaaaacaacactgagat
ttcatcgtttaccaatcagaatggctaagatcaaaatctcaagcaacagc
acactctgttgaagatatggagcaagggaaacagtacttcactgttggtg
ggcttgccaacttgtataacctttctggaaatgaatccagcagttcctca
gaaagttgaaaagagttctacctgaagacttagcacatctaggcatatag
atgttccaccgtacttcagtgacatatgtgttccattatgtgattaacaa
tgcagatgtccctcaaccaaagaatggtttcagaaaatgtggtttattta
caaaatggaatactacttcagctattaaaatcaagcacatcatgaaattt
gcaggcaaatgaatagaactagaaaatatcatcctgtgtgaggtaaccca
aacccaaaaggacatgcatggtatgtactcactgataagtggatatcaaa
catagaatacaagatacatatgttatactcaacagactgaaaatagctaa
acaagaaggaaggtacaagtgaggatgcttgaatttcactccaaaggtag
actagtcataataggcaggtagattgaggaaactagttgagagaggggat
agtgagaggtaagttg

gaattctgtgtctttaagagaaatgaacttgtctttccacattaccttcc
atctttctttgcaccctggtcagaaagttcaaactcgaagaaaacccaac
tctatttctttcagtctttcatgcaggcatagttggaaaaaaaaatcaag
cttcagaaccaaaagttattttaaaaaaaaaaaactgcataatttatttg
cattttaaacatggtattcggaatgaggggcttaaagaacatacgtcttc
tgttcttcaaagactggccttccaatgtcctgatctcctgtcttatttcc
tgagactgtaggcgtatgcttcagcagtgctcccgaaagcgcagtagagc
atcttactcccctctctgtttctccttatacactgtaatggtccctatgc
ctttctcgggaagtctctgggagaaatcatccatccatacctgacctagc
aaggcagagttctgctgtaggtcaattacagaacgcacttgactccctcc
aaccagccccaccaatgctctctcggttttctctggagacccactcttaa
tggttcttgtgcattcccactttcagtttcttagtgccagactgcagaga
ataattattagtcattgtcctgacacatagacacatgaacaataggtttc
catcttgcacatttgcttaaattatgtgagactgcaatagatatttgatg
gcttgggtggtttcgggcacattcattcactcaccaaattgatttgaaat
aaatgatcttctctgataaggtgggtgcgattcattttatgtacattggg
gatacaatgatgggtaaaacatttgtggtgcagtgtgagagttcagagga
agagagtggggcagctagctacagagagagggggaaatgtatcaaaggaa
atgtatcttcacaatccctttcagagaatcaggtggggaagagaagggat
acacaggagggagttgaagcactacttgtcatataaaatcacggatgaca
aacctttaacacctttttgcattgtcagccataatgtccaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59094764_59095794
seq2: B6Ng01-269N03.g_69_1111

seq1  GAATTCTGTGTCTTTAAGAGAAATGAACTTGTCTTTCCACATTACCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCTTTAAGAGAAATGAACTTGTCTTTCCACATTACCTTCC  50

seq1  ATCTTTCTTTGCACCCTGGTCAGAAAGTTCAAACTCGAAGAAAACCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTTGCACCCTGGTCAGAAAGTTCAAACTCGAAGAAAACCCAAC  100

seq1  TCTATTTCTTTCAGTCTTTCATGCAGGCATAGTTGGAAAAAAAAATCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTTTCAGTCTTTCATGCAGGCATAGTTGGAAAAAAAAATCAAG  150

seq1  CTTCAGAACCAAAAGTTATTTTAAAAAAAAAAAACTGCATAATTTATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAACCAAAAGTTATTTTAAAAAAAAAAAACTGCATAATTTATTTG  200

seq1  CATTTTAAACATGGTATTCGGAATGAGGGGCTTAAAGAACATACGTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAACATGGTATTCGGAATGAGGGGCTTAAAGAACATACGTCTTC  250

seq1  TGTTCTTCAAAGACTGGCCTTCCAATGTCCTGATCTCCTGTCTTATTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCAAAGACTGGCCTTCCAATGTCCTGATCTCCTGTCTTATTTCC  300

seq1  TGAGACTGTAGGCGTATGCTTCAGCAGTGCTCCCGAAAGCGCAGTAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGTAGGCGTATGCTTCAGCAGTGCTCCCGAAAGCGCAGTAGAGC  350

seq1  ATCTTACTCCCCTCTCTGTTTCTCCTTATACACTGTAATGGTCCCTATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACTCCCCTCTCTGTTTCTCCTTATACACTGTAATGGTCCCTATGC  400

seq1  CTTTCTCGGGAAGTCTCTGGGAGAAATCATCCATCCATACCTGACCTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCGGGAAGTCTCTGGGAGAAATCATCCATCCATACCTGACCTAGC  450

seq1  AAGGCAGAGTTCTGCTGTAGGTCAATTACAGAACGCACTTGACTCCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAGTTCTGCTGTAGGTCAATTACAGAACGCACTTGACTCCCTCC  500

seq1  AACCAGCCCCACCAATGCTCTCTCGGTTTTCTCTGGAGACCCACTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCCCCACCAATGCTCTCTCGGTTTTCTCTGGAGACCCACTCTTAA  550

seq1  TGGTTCTTGTGCATTCCCACTTTCAGTTTCTTAGTGCCAGACTGCAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTGTGCATTCCCACTTTCAGTTTCTTAGTGCCAGACTGCAGAGA  600

seq1  ATAATTATTAGTCATTGTCCTGACACATAGACACATGAACAATAGGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTAGTCATTGTCCTGACACATAGACACATGAACAATAGGTTTC  650

seq1  CATCTTGCACATTTGCTTAAATTATGTGAGACTGCAATAGATATTTGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCACATTTGCTTAAATTATGTGAGACTGCAATAGATATTTGATG  700

seq1  GCTTGGGTGGTTTCGGGCACATTCATTCACTCACCAAATTGATTTGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGTGGTTTCGGGCACATTCATTCACTCACCAAATTGATTTGAAAT  750

seq1  AAATGATCTTCTCTGATAAGGTGGGTGCGATTCATTTTATGTACATTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATCTTCTCTGATAAGGTGGGTGCGATTCATTTTATGTACATTGGG  800

seq1  GATACAATGATGGGTAAAACA-TTGTGGTGCAGTGTGAGAGTTCAGAGGA  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATACAATGATGGGTAAAACATTTGTGGTGCAGTGTGAGAGTTCAGAGGA  850

seq1  AGAGAGTGGGGCAGCTAGCTACAGAGAGA-GGGGAAATGTATCAAAGGAA  898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGAGAGTGGGGCAGCTAGCTACAGAGAGAGGGGGAAATGTATCAAAGGAA  900

seq1  ATGTATCTTCACAATCCC-TTCAGAGAATCAGGTGGGGAAGAGAAGGGAT  947
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGTATCTTCACAATCCCTTTCAGAGAATCAGGTGGGGAAGAGAAGGGAT  950

seq1  ACACAGGAGGGAG-TGAAGCACTAC-TGTCATA-AAAATCACGGATGACA  994
      ||||||||||||| ||||||||||| ||||||| ||||||||||||||||
seq2  ACACAGGAGGGAGTTGAAGCACTACTTGTCATATAAAATCACGGATGACA  1000

seq1  AAC--TTAACACC-TTTTGCA-TGTCAG-CATAATGT-CAAGA  1031
      |||  |||||||| ||||||| |||||| |||||||| |||||
seq2  AACCTTTAACACCTTTTTGCATTGTCAGCCATAATGTCCAAGA  1043


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