BAC Information

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BAC

Clone NameB6Ng01-270N02
Chromosome17 (Build37)
Map Location 77,546,414 - 77,547,282
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043886, EG624348
Downstream geneLOC545234, LOC100043887, LOC668795
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270N02.bB6Ng01-270N02.g
ACCGA073061GA073062
length1,065870
definitionB6Ng01-270N02.b B6Ng01-270N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctacatgcagaccactatttgaacccgcaccatgtgttgaaa
atgctttattttttccccactgaattattttagtttctttgtcaatgatt
acatgatcataggtgtatgggtttatttctgcatcttcaattctattcca
ttgattgacctctgtctctgtaccaatagcatgaagttggttttgtttgt
ttgtttgtttgttttatcagtatcagtctgcaggagaccttgaggtcagg
aatggtgattccaccagaagtttgttttttttgtttgtttgtttgtttgt
tttgttttgtttctgttttttatttttgaagaccgattgatcttgggtat
tttgttattctggatgaagtggagaattgctttttctatccctgtgaaga
attgagttggaattttgatggggattgcattgaatctgtagattgctttt
ggtaggatgaccacttttactatattaatcctaatcatccatgagcatgg
aattctttccatcttctgatattttcttcaatttccttcttcggggactt
gaagttcttgtcatacatatctttcagttctttcttaaaccatttatcct
ttgtatagaagaaggcaactgatttatttgagtgaatgttatatgcagcc
cctttgctgaagttgtgtatcacctgtacgtgttctctggtagaattttt
gtgggtggcttgtgtatactcttctatcatctgcaaatagcaatatcttg
acttcttcctttctaaacttgtgtccctttattccccgttgttgtctgat
tattctggcaagaactttgagtactatattgaatagatagaaagacagtg
ggcagacttgtcattttcctgattttagagaagtttcaagtttctctcca
tttaatttgatgctggctattggtttggctttttaatgtttaggtatgtg
ccctggattccttatatttccagagtttttaaatgaaggaaacattgaat
ttaacatctaatgaaatgaccaatattcattttctccttgatgtttgttt
atattaaagggatta

gaattctcctaagagttacaataaaccatgagatatctcaggagctcgtc
ttgacttatatttccagttgaccaatgtaactcatgatttccaatagtca
gagtgatgttgaaagaaaaacacattttaagaaatggcagttagctctcg
gtgtttaattgttcatccagagtacctaaaatgaataagaaatatttata
tttaatctagattacttagtccattctattccatcattaaggtttcagtt
tgatacaggtcttacatatcagtgtctaatatatttatacttaaccaaac
caaattatgaataattggcatatcagtctaagaaatattttatatctcaa
taaaaacttatcatttgtttaattccttgatttggtgttttttacctttc
tttaagtattggcactgctttctgttttcatttaatgtgttatattttcg
ctacatgccatatattagcactttatcttatctagcatttttgtgatttt
caatcttactggtaagctttcagctgagttgtgtttagcctaatcgagaa
taattggaacttctgaatacttgactttaggcttttgtagagggaactat
attctgaaaatgagagttgaaagctgtgaggtgttgatactcagaacgaa
aaaaatatataagtatatataaacaatagtgaattccacttacaactttg
aagcactggcatatcataaactgctatgtaaaacagcactaaatggatgc
aataaattggtttgaattgtgatatatatatatatatatatatatatata
tatatatatatatatatatatacacatacacacatatatatatatattta
ttttcctatactctaggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77546414_77547282
seq2: B6Ng01-270N02.g_67_936 (reverse)

seq1  CATCCTAGTGTATAGG-AAATATATATATATATATTTGTGTGTATGTGTA  49
      |||||||| ||||||| ||||| |||||||||||| ||||||||||||||
seq2  CATCCTAGAGTATAGGAAAATAAATATATATATATATGTGTGTATGTGTA  50

seq1  TATATATATATATATATATATATATATATATATATATATATATATATATC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATATATATATC  100

seq1  ACAATTCAAACCAATTTATTGCATCCATTTAGTGCTGTTTTACATAGCAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCAAACCAATTTATTGCATCCATTTAGTGCTGTTTTACATAGCAG  150

seq1  TTTATGATATGCCAGTGCTTCAAAGTTGTAAGTGGAATTCACTATTGTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATATGCCAGTGCTTCAAAGTTGTAAGTGGAATTCACTATTGTTT  200

seq1  ATATATACTTATATATTTTTTTCGTTCTGAGTATCAACACCTCACAGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACTTATATATTTTTTTCGTTCTGAGTATCAACACCTCACAGCTT  250

seq1  TCAACTCTCATTTTCAGAATATAGTTCCCTCTACAAAAGCCTAAAGTCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCTCATTTTCAGAATATAGTTCCCTCTACAAAAGCCTAAAGTCAA  300

seq1  GTATTCAGAAGTTCCAATTATTCTCGATTAGGCTAAACACAACTCAGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCAGAAGTTCCAATTATTCTCGATTAGGCTAAACACAACTCAGCTG  350

seq1  AAAGCTTACCAGTAAGATTGAAAATCACAAAAATGCTAGATAAGATAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTACCAGTAAGATTGAAAATCACAAAAATGCTAGATAAGATAAAG  400

seq1  TGCTAATATATGGCATGTAGCGAAAATATAACACATTAAATGAAAACAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATATATGGCATGTAGCGAAAATATAACACATTAAATGAAAACAGA  450

seq1  AAGCAGTGCCAATACTTAAAGAAAGGTAAAAAACACCAAATCAAGGAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGCCAATACTTAAAGAAAGGTAAAAAACACCAAATCAAGGAATT  500

seq1  AAACAAATGATAAGTTTTTATTGAGATATAAAATATTTCTTAGACTGATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGATAAGTTTTTATTGAGATATAAAATATTTCTTAGACTGATA  550

seq1  TGCCAATTATTCATAATTTGGTTTGGTTAAGTATAAATATATTAGACACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTATTCATAATTTGGTTTGGTTAAGTATAAATATATTAGACACT  600

seq1  GATATGTAAGACCTGTATCAAACTGAAACCTTAATGATGGAATAGAATGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTAAGACCTGTATCAAACTGAAACCTTAATGATGGAATAGAATGG  650

seq1  ACTAAGTAATCTAGATTAAATATAAATATTTCTTATTCATTTTAGGTACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTAATCTAGATTAAATATAAATATTTCTTATTCATTTTAGGTACT  700

seq1  CTGGATGAACAATTAAACACCGAGAGCTAACTGCCATTTCTTAAAATGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAACAATTAAACACCGAGAGCTAACTGCCATTTCTTAAAATGTG  750

seq1  TTTTTCTTTCAACATCACTCTGACTATTGGAAATCATGAGTTACATTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTCAACATCACTCTGACTATTGGAAATCATGAGTTACATTGGT  800

seq1  CAACTGGAAATATAAGTCAAGACGAGCTCCTGAGATATCTCATGGTTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGAAATATAAGTCAAGACGAGCTCCTGAGATATCTCATGGTTTAT  850

seq1  TGTAACTCTTAGGAGAATTC  869
      ||||||||||||||||||||
seq2  TGTAACTCTTAGGAGAATTC  870


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