BAC Information

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BAC

Clone NameB6Ng01-273C16
Chromosome17 (Build37)
Map Location 63,071,759 - 63,205,485
singlet/doubletdoublet
Overlap geneEfna5
Upstream genenone
Downstream geneFbxl17, Ppia-ps17_1026.1, LOC638867, LOC668677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273C16.bB6Ng01-273C16.g
ACCGA074807GA074808
length538821
definitionB6Ng01-273C16.b B6Ng01-273C16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,071,759 - 63,072,301)(63,204,881 - 63,205,485)
sequence
tttatagacagagaaagagagagagagaggaagagggagggggagtggaa
gagggagaggagcaggcaaaggggaaaaggaatggggtggatttggtgaa
aggacacaacgtaccacagtttcaacagtcactttattttttccaactac
cacgattatttatcactgtagaaagcatcattagaaaacctttgaatgaa
atttccaaatacaattttgttttgaggtcttcagaaacaaagatatactg
tgtacatgttttacagcatcctcgttcgctatctagaacttctaaaacag
gaaagcaagtaccggatgggtatccttgacgacagaccgtcttcccccat
ttgtcctgaggagttcctgcctatccgttctatgagaagctttctgctcc
ttctagtgtttctgttttaaagaactccctgtcgtgcagaagagaaatgt
gaaaagcctttctgtgctgagctgaaataattaaggaaaagtcatttctt
aagttatctctgtgtgtgtctggggtgggggtggggga
gaattcatttcatttttaaaaaatattatattggtccatgcacttggaga
gatgattgttacagtcaagccaattagcatgcccaatctcttcagtacac
aataaaattttcttccttccttccttccttccttccttccttccttcctt
ccttccttcctctctctctctctctctctctctttctctctctctctccc
ttccttccttccttttttttttttttttttgagatggggtttctctgtgg
ctgtctgactgtctagaattcactctgtagactaggctgggctcaaactc
agagatccacctgcctctgcttcccaagtactgtgcttaaaggcatgtac
caccatacccagcatgttttacatattctttttgtttttttttaatgtta
aaaagaaaataattccatttattttattttatttttattagatattttct
tcattgcatttcaaatgctatcccctttcctagtttcctctccaaaaatc
ccctattcacttccctcttcccctcttgccctgctccccaaccttcccac
tcccgcttcctggccctggcatttccctacattggggcatagaatcttcc
caagaccaagggcctctcctcccattaatggccgactaggtcctcctctg
ctacataagcagctagagacatatgtttttctttgattgggtggttaact
gttgtcctcatcatgccctattagatcttcaggtttattttcatattata
tcactatatcttgtgtcctgtgacttcaccttgttaacatcgaatactaa
gtcccaggatttatttatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_63071759_63072301
seq2: B6Ng01-273C16.b_44_586

seq1  GAATTCTTTATAGACAGAGAAAGAGAGAGAGAGAGGAAGAGGGAGGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATAGACAGAGAAAGAGAGAGAGAGAGGAAGAGGGAGGGGGA  50

seq1  GTGGAAGAGGGAGAGGAGCAGGCAAAGGGGAAAAGGAATGGGGTGGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGAGGGAGAGGAGCAGGCAAAGGGGAAAAGGAATGGGGTGGATTT  100

seq1  GGTGAAAGGACACAACGTACCACAGTTTCAACAGTCACTTTATTTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAAGGACACAACGTACCACAGTTTCAACAGTCACTTTATTTTTTCC  150

seq1  AACTACCACGATTATTTATCACTGTAGAAAGCATCATTAGAAAACCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCACGATTATTTATCACTGTAGAAAGCATCATTAGAAAACCTTTG  200

seq1  AATGAAATTTCCAAATACAATTTTGTTTTGAGGTCTTCAGAAACAAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTTCCAAATACAATTTTGTTTTGAGGTCTTCAGAAACAAAGAT  250

seq1  ATACTGTGTACATGTTTTACAGCATCCTCGTTCGCTATCTAGAACTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTGTACATGTTTTACAGCATCCTCGTTCGCTATCTAGAACTTCTA  300

seq1  AAACAGGAAAGCAAGTACCGGATGGGTATCCTTGACGACAGACCGTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGAAAGCAAGTACCGGATGGGTATCCTTGACGACAGACCGTCTTC  350

seq1  CCCCATTTGTCCTGAGGAGTTCCTGCCTATCCGTTCTATGAGAAGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTGTCCTGAGGAGTTCCTGCCTATCCGTTCTATGAGAAGCTTTC  400

seq1  TGCTCCTTCTAGTGTTTCTGTTTTAAAGAACTCCCTGTCGTGCAGAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCTCCTTCTAGTGTTTCTGTTTTAAAGAACTCCCTGTCGTGCAGAAGAG  450

seq1  AAATGTGAAAAGCCTTTCTGTGCTGAGCTGAAATAATTAAGGAAAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAAAAGCCTTTCTGTGCTGAGCTGAAATAATTAAGGAAAAGTCA  500

seq1  TTTCTTAAGTTATCTCTGTGTGTGTCTGGGGTGGGGGTGGGGG  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAGTTATCTCTGTGTGTGTCTGGGGTGGGGGTGGGGG  543

seq1: chr17_63204881_63205485
seq2: B6Ng01-273C16.g_64_668 (reverse)

seq1  TCTTGGGAAGATTCTATGCCCCAATGTAGGGAAATGCCAGGGCCAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGAAGATTCTATGCCCCAATGTAGGGAAATGCCAGGGCCAGGAAG  50

seq1  CGGGAGTGGGAAGGTTGGGGAGCAGGGCAAGAGGGGAAGAGGGAAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGTGGGAAGGTTGGGGAGCAGGGCAAGAGGGGAAGAGGGAAGTGAA  100

seq1  TAGGGGATTTTTGGAGAGGAAACTAGGAAAGGGGATAGCATTTGAAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGATTTTTGGAGAGGAAACTAGGAAAGGGGATAGCATTTGAAATGC  150

seq1  AATGAAGAAAATATCTAATAAAAATAAAATAAAATAAATGGAATTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAAATATCTAATAAAAATAAAATAAAATAAATGGAATTATTTT  200

seq1  CTTTTTAACATTAAAAAAAAACAAAAAGAATATGTAAAACATGCTGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAACATTAAAAAAAAACAAAAAGAATATGTAAAACATGCTGGGTA  250

seq1  TGGTGGTACATGCCTTTAAGCACAGTACTTGGGAAGCAGAGGCAGGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTACATGCCTTTAAGCACAGTACTTGGGAAGCAGAGGCAGGTGGA  300

seq1  TCTCTGAGTTTGAGCCCAGCCTAGTCTACAGAGTGAATTCTAGACAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGTTTGAGCCCAGCCTAGTCTACAGAGTGAATTCTAGACAGTCA  350

seq1  GACAGCCACAGAGAAACCCCATCTCAAAAAAAAAAAAAAAAAAGGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCACAGAGAAACCCCATCTCAAAAAAAAAAAAAAAAAAGGAAGGA  400

seq1  AGGAAGGGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGGAAG  450

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAATT  500

seq1  TTATTGTGTACTGAAGAGATTGGGCATGCTAATTGGCTTGACTGTAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGTACTGAAGAGATTGGGCATGCTAATTGGCTTGACTGTAACAA  550

seq1  TCATCTCTCCAAGTGCATGGACCAATATAATATTTTTTAAAAATGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTCCAAGTGCATGGACCAATATAATATTTTTTAAAAATGAAATG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605