MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-284A13
Chromosome	17 (Build37)
Map Location	16,687,186 - 16,688,266
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Prdm9, EG626573, LOC665017, LOC100041775, 5830433I10Rik, Chd1, Rgmb, LOC100041365, Eif3s6-ps3, LOC100041383, LOC100041394
Downstream gene	LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep
Link	Open Mouse BAC browser

Click to get alignment info.

name	Prdm9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213389 MGI:2384854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	EG626573 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626573 MGI:3646669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC665017 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 60 ESTs, 15 Proteins pseudo : _no_value

name	LOC100041775 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	5830433I10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76030 MGI:1923280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Chd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12648 MGI:88393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgmb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68799 MGI:1916049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041365 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Eif3s6-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16344 MGI:103213
definition	gene_synonym : Int6-ps3 note : eukaryotic translation initiation factor 3, subunit 6, pseudogene 3 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100041394 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041394
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC213781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 495 ESTs, 13 Proteins pseudo : _no_value

name	LOC100041407 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 ESTs, 8 Proteins

name	LOC665072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	EG383211 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383211 MGI:3644871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins pseudo : _no_value

name	LOC626785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 211 ESTs, 5 Proteins pseudo : _no_value

name	LOC665085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 ESTs, 16 Proteins pseudo : _no_value

name	BC002059 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213811 MGI:2384864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC018101 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:449000 MGI:3052731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp97 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22759 MGI:105921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG382161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382161 MGI:3646034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein

name	LOC676238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG626854 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626854 MGI:3645888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041965 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1484 ESTs, 6 Proteins pseudo : _no_value

name	Riok2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67045 MGI:1914295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lix1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66643 MGI:1913893
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383297 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Lnpep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240028 MGI:2387123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prdm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268533 GeneID:213389 MGI:2384854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : PR domain containing 9, transcript variant 1 transcript_id : XM_619431.4

name	EG626573 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401649 GeneID:626573 MGI:3646669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG626573 transcript_id : XM_891173.2

name	5830433I10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268481 GeneID:76030 MGI:1923280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 5830433I10 gene transcript_id : XM_974092.2

name	Chd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365793 GeneID:12648 MGI:88393
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromodomain helicase DNA binding protein 1 transcript_id : NM_007690.2

name	Rgmb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32490564 GeneID:68799 MGI:1916049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RGM domain family, member B transcript_id : NM_178615.3

name	LOC100041407 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268483 GeneID:100041407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 ESTs, 8 Proteins product : similar to B-myb transcript_id : XM_001476338.1

name	BC002059 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703793 GeneID:213811 MGI:2384864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC002059 transcript_id : NM_145397.1

name	BC018101 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52851394 GeneID:449000 MGI:3052731
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC018101 transcript_id : NM_001005358.1

name	Zfp97 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815835 GeneID:22759 MGI:105921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 97 transcript_id : NM_011765.4

name	EG382161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268488 GeneID:382161 MGI:3646034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein product : predicted gene, EG382161, transcript variant 1 transcript_id : XM_356261.6

name	EG626854 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268457 GeneID:626854 MGI:3645888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG626854 transcript_id : XM_001471565.1

name	Riok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385427 GeneID:67045 MGI:1914295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIO kinase 2 (yeast) transcript_id : NM_025934.1

name	Lix1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118403301 GeneID:66643 MGI:1913893
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb expression 1 homolog (chicken) transcript_id : NM_025681.2

name	Lnpep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802386 GeneID:240028 MGI:2387123
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucyl/cystinyl aminopeptidase transcript_id : NM_172827.2

name	Prdm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268534 GeneID:213389 MGI:2384854
definition	codon_start : 1 product : PR-domain zinc finger protein isoform 1 protein_id : XP_619431.3

name	EG626573 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82986575 GeneID:626573 MGI:3646669
definition	codon_start : 1 product : similar to mitochondrial ribosomal protein S21 protein_id : XP_896266.1

name	5830433I10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268482 GeneID:76030 MGI:1923280
definition	codon_start : 1 product : hypothetical protein LOC76030 protein_id : XP_979186.2

name	Chd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680928 CCDS:CCDS28416.1 GeneID:12648 MGI:88393
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence NAS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IEA] [Evidence NAS]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence NAS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence NAS] [Evidence IEA] codon_start : 1 exception : mismatches in translation product : chromodomain helicase DNA binding protein 1 protein_id : NP_031716.1

name	Rgmb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32490565 GeneID:68799 MGI:1916049
definition	GO_component : GO:0046658 - anchored to plasma membrane [Evidence IDA]; GO:0005793 - ER-Golgi intermediate compartment [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IDA] GO_process : GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 product : repulsive guidance molecule B protein_id : NP_848730.2

name	LOC100041407 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268484 GeneID:100041407
definition	codon_start : 1 product : similar to B-myb protein_id : XP_001476388.1

name	BC002059 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703794 GeneID:213811 MGI:2384864
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC213811 protein_id : NP_663372.1

name	BC018101 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52851395 GeneID:449000 MGI:3052731
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC449000 protein_id : NP_001005358.1

name	Zfp97 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815836 GeneID:22759 MGI:105921
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 97 protein_id : NP_035895.2

name	EG382161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268489 GeneID:382161 MGI:3646034
definition	codon_start : 1 product : similar to CDNA sequence BC018101 isoform 1 protein_id : XP_356261.6

name	EG626854 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268458 GeneID:626854 MGI:3645888
definition	codon_start : 1 product : similar to zinc finger protein 709 protein_id : XP_001471615.1

name	Riok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385428 CCDS:CCDS28417.1 GeneID:67045 MGI:1914295
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : RIO kinase 2 protein_id : NP_080210.1

name	Lix1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118403302 GeneID:66643 MGI:1913893
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : limb expression 1 protein_id : NP_079957.2

name	Lnpep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370240 GeneID:240028 MGI:2387123
definition	GO_component : GO:0005624 - membrane fraction [Evidence IMP]; GO:0005792 - microsome [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IMP]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030163 - protein catabolism [Evidence IMP] codon_start : 1 product : leucyl/cystinyl aminopeptidase protein_id : NP_766415.1

name	LOC100041365 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041365
definition	number : 2 pseudo : _no_value

name	LOC100041365 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041365
definition	number : 1 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 3 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 2 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 1 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 1 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 2 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 3 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 1 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 2 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 3 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 1 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 2 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 3 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 4 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 5 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 6 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 7 pseudo : _no_value

name	LOC383297 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383297
definition	number : 1 pseudo : _no_value

name	LOC665017 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268480 GeneID:665017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 60 ESTs, 15 Proteins product : similar to Odc1 protein pseudo : _no_value transcript_id : XR_032613.1

name	LOC100041775 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268537 GeneID:100041775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to integrin beta 3 binding protein pseudo : _no_value transcript_id : XR_033510.1

name	LOC213781 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268548 GeneID:213781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 495 ESTs, 13 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033527.1

name	EG383211 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268485 GeneID:383211 MGI:3644871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : predicted gene, EG383211 pseudo : _no_value transcript_id : XR_001688.2

name	LOC626785 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268553 GeneID:626785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 211 ESTs, 5 Proteins product : similar to Lysosomal-associated protein transmembrane 4B pseudo : _no_value transcript_id : XR_033531.1

name	LOC665085 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268486 GeneID:665085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 ESTs, 16 Proteins product : similar to cyclin B pseudo : _no_value transcript_id : XR_032712.1

name	LOC100041965 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268563 GeneID:100041965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1484 ESTs, 6 Proteins product : similar to ornithine decarboxylase antizyme pseudo : _no_value transcript_id : XR_033561.1

clone name	MSMg01-446N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045H22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296M08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-234O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494F06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-072H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515F20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-417A16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-449I17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-306J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-284A13.b	B6Ng01-284A13.g
ACC	GA082838	GA082839
length	1,205	1,222
definition	B6Ng01-284A13.b	B6Ng01-284A13.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaaggcccatacctaaccatgataaaagcaatctacaacaaacca atagccaacatcaaagtaaatggtgagaagcttgaagcaatcccactaaa atcagggactagacaaggctgtccactctctccattcctattcaacattg ttcttgaattcctagccagagcaattcgacaacaaaaggagatcaagggg atacaaaatggaaaagaggaagtcaaagcttgtttttcttaatgagagac agaaagggaataggtagagaaaggaggagatttgaatagaaactagggaa agtagaggaaagtgaaaacataattaggatatattatgtgagaaaaagtc cattttcaataaaaggagagaaaactgtgcttgtataaattctttattct agcaattcaactttgtagtgtatcctattgttattcttaaaggaattttg ttgtatatttcacatgatacaataacacaatcttctgtgtaataggaaaa tatggaaaagaaactaaatttttatcaaggtggctaagaaattaatttac attacatatatagtatgaactatcatacaactgcaacaacttaaagtagc tctttgtacactaaaatagaatgatgttcttggacaaaccctgtgaaaga acagattacgttgcttatgatagagttttcatgcatgcataaatgctggg agtggaagtattctcatttgagaaaattgaaggtactcaaataattggct tttggaggaatgaagtatccacacgctggtctccccccttagaatagggg acaaaatacccatgaaaggagttacagagacaaagtttggagctaagatg aaaggatggactatccagagactaccccacccagggatccatcctataat cagccaccaaacccagacactattgcatatgccagcaatagtgattttgc tgaaggaccctgttatagctgtctcgtatgaggctatgccagtgcctgag aaatacagaagtgaatggaacagtcattttatagctggaacaaagggccc caatggagggagctagtgaaagcacccaagactaaaggaatctgctaccc tataggtacaacacaatattgaactaacagtaacccgagctcggttctct aacgtcttgtaccaagaatgctatcggccaccatggagaaagagaaagtg cccct	gaattccacactaaaaccatctggtcctgggcttatttttggttgggagg cttttaattacttctatttacttaggggatatcaacctgttcagatagtt tacctgctcttgatttaactttgatacatggtgtctgtatagaaaaccat ccatagattttccaggtgttttttttttttttttttttttttgagtatag actttagaagtaggatctaatgatgttttgaatttcttcactttctgtat tatctctcccttcttattcctagttttgttaaattgggtactatctctgt gccctttagttcattaggctaaggattaatctattttcttgattttctca aagaaccagcttttggttttcttgatttttgttgatttctattgttctct ttgtttctttttggttcatttctgctctgaatttgactatttcctgcctt gaactcctcttgtgtgtgtctgcttctttttgttctagggctttcaggtg tgatgttaagttgcttgtgtaggatctctccaatttctttacaagggaac ttagtgctataaattttcctcttagcactgcgttcattgtgtcccataag tttgggtatgctgtgtcatcatttttattaaattccaaagtctttaattt ctttctttttctttcttttttgtcttgatattttctttattaacatttca aaagttatcccctttcctagtctccagtccgaaagtcccctatatcctcc tcctttcccctactaatcaacccacccactcccacttcctagccctggta tttccgcactctgggacatagagccttcataggaccaaagggcctctcct cccagagatgaccgactatgtcatcctctgctacatatgcagctagaaac atgattcccaccatgttgtttttctttggctggtggtttagtcccaggga actctgcaaggtactggttagttcatatttgttgtcctcctatggggctg tttaaacccctttcagctccttggtactttctcttagcttccttcaattg gaaccctgtgctcccatctaaatggatgggctgtggagcatccacctttc ggttattggccaggcaatggcgagacctccatggatcgcgcttatatcag gctccttgtcagccagacctagtgtggcatctcacaccatatatgtctca ctgtgactttgatggactctga
quality values	Open. Hide. 62 41 22 35 62 34 27 47 62 62 62 62 47 26 62 62 62 62 62 62 62 62 44 44 62 59 59 62 62 62 62 62 43 45 41 28 32 32 33 32 50 51 50 54 54 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 36 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 54 58 54 58 54 58 49 44 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 52 58 58 58 58 58 58 58 54 58 58 58 58 53 51 58 58 58 58 58 54 58 53 49 50 50 58 49 51 58 58 51 51 58 52 58 42 39 58 45 34 49 51 58 47 58 58 58 51 51 50 52 58 49 44 41 58 50 58 51 51 49 58 58 50 58 47 42 52 53 58 35 53 49 38 49 58 50 58 54 58 49 53 53 58 46 32 52 53 58 46 46 58 58 49 52 42 53 58 52 42 53 58 52 41 52 41 58 40 49 58 42 51 58 58 49 49 30 52 51 38 40 44 35 50 39 35 58 51 58 53 43 46 49 44 44 51 42 54 54 54 40 35 54 47 53 52 26 39 21 35 35 54 49 40 54 49 40 37 49 42 54 54 49 29 49 33 36 27 50 27 47 21 52 52 37 31 52 42 54 34 43 40 40 42 42 31 53 49 42 46 53 42 45 51 38 45 41 32 54 33 33 33 35 33 35 32 36 46 32 33 32 30 53 52 47 27 21 32 49 49 32 45 31 32 40 36 29 32 33 33 49 40 30 47 34 30 34 52 31 30 26 31 51 29 32 27 25 51 35 31 31 51 31 43 30 42 31 31 39 31 45 26 33 23 24 31 51 22 13 45 14 21 36 38 16 19 37 34 31 37 38 25 31 42 24 30 28 34 33 26 41 40 40 31 41 40 36 31 31 47 34 11 21 16 35 29 31 31 31 29 32 32 25 25 31 34 32 34 29 25 23 28 25 31 39 31 35 41 31 30 33 37 22 30 30 27 27 22 31 29 27 28 31 22 22 31 18 18 21 20 31 24 26 38 35 27 32 31 28 32 48 48 25 18 27 31 20 27 7 10 5 17 20 33 20 31 29 16 11 23 29 23 24 32 33 32 22 31 31 25 23 14 22 26 27 22 25 23 22 32 23 18 16 15 27 19 20 23 30 12 17 27 23 29 15 26 31 13 16 12 16 5 7 10 27 16 28 28 19 21 21 13 15 13 10 8 10 16 27 27 9 15 7 5 7 7 19 5 3 5 23 16 16 13 13 14 7 30 18 17 34 17 10 28 26 17 6 9 16 28 21 19 14 28 11 11 8 13 20 18 7 12 11 8 17 15 12 15 8 18 27 20 7 6 3 3 5 13 7 23 11 13 11 9 11 16 8 5 9 15 4 8 8 23 15 2 6 8 6 13 11 11 10 20 8 8 5 10 7 7 15 7 5 4 10 4 14 4 6 21 8 10 17 6 13 14 7 6 13 20 3 1 3 4 2 4 6 7 4 5 4 3 4 6 6 4 3 8 6 4 4 7 7 4 3 3 3 4 10 14 4 2 2 4 14 18 4 2 2 3 4 4 9 11 5 7 24 5 5 3 4 6 5 24 8 9 5 9 5 16 4 6 7 8 4 12 18 22 13 6	Open. Hide. 62 59 43 46 62 62 46 43 59 62 62 39 34 25 27 27 28 23 23 32 28 49 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 62 62 62 59 59 59 59 54 48 54 59 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 43 28 38 30 30 34 34 34 23 28 34 32 43 46 34 18 28 48 28 38 34 27 34 28 34 23 27 23 27 36 34 34 39 37 43 46 50 50 27 45 49 40 45 28 23 34 34 43 34 39 45 32 45 40 34 36 40 41 43 43 40 39 28 34 40 34 34 43 43 34 36 37 34 39 41 43 46 43 49 40 46 34 35 43 46 38 46 35 36 40 51 51 43 45 48 46 50 37 43 34 40 41 37 30 31 34 34 39 31 35 30 50 50 43 51 49 43 27 28 32 37 34 43 46 50 23 50 30 34 34 43 24 49 38 28 31 34 43 31 34 30 34 39 51 43 43 34 34 34 36 43 43 51 45 45 34 34 34 24 30 34 13 45 43 24 36 25 25 28 59 59 59 56 51 51 43 51 51 51 45 43 38 38 43 41 45 45 38 43 45 41 38 27 38 35 38 38 30 28 38 32 32 50 22 31 32 27 35 35 50 50 50 38 50 50 39 42 51 50 50 62 38 51 28 36 31 33 51 38 39 31 22 28 28 24 27 27 39 51 51 42 51 38 22 51 31 31 38 38 50 47 39 43 30 41 31 38 22 36 37 33 42 33 30 38 38 22 31 27 27 38 20 31 23 38 22 38 28 30 25 30 35 35 34 35 33 52 50 47 41 40 34 34 35 27 35 24 52 52 33 47 52 31 35 35 14 35 13 23 19 27 38 29 28 22 29 39 47 23 39 40 29 34 47 29 30 21 19 21 33 32 32 39 34 27 27 27 42 34 31 25 34 47 52 52 37 42 47 52 47 33 35 50 35 52 50 52 41 33 34 24 29 12 32 52 29 31 34 37 46 46 40 37 52 50 50 50 47 34 42 42 40 42 21 35 35 34 37 47 33 23 34 35 42 37 38 48 50 31 48 47 46 52 42 32 39 50 50 32 47 39 39 54 49 46 27 41 28 42 40 39 46 40 48 35 42 46 46 41 37 46 50 52 58 46 36 29 37 39 42 42 40 41 32 25 24 23 39 27 24 39 32 40 40 40 49 24 44 35 40 29 35 40 50 26 29 31 33 33 43 31 30 26 39 28 29 26 30 58 21 26 16 33 15 18 30 35 29 34 35 50 34 31 42 30 31 26 38 21 29 35 44 29 36 40 46 31 34 40 52 52 51 26 52 47 32 34 27 49 42 42 40 49 38 17 47 23 39 12 23 35 32 24 39 13 37 40 19 42 24 51 44 46 32 40 25 47 42 42 34 40 37 24 25 24 51 16 25 31 31 21 34 30 32 34 13 30 26 33 32 32 29 31 31 35 35 20 12 27 18 49 40 26 17 46 47 28 31 41 24 32 28 29 26 31 30 18 38 26 36 27 38 51 46 27 18 22 12 29 28 51 39 31 51 21 31 28 28 33 34 33 29 51 45 32 21 34 32 32 10 22 17 31 22 18 26 25 23 32 38 11 38 33 22 14 6 31 11 21 38 27 21 38 25 30 30 18 32 31 24 40 19 24 19 42 14 41 33 24 31 6 19 14 37 18 32 36 38 37 31 26 26 32 32 38 34 32 17 16 15 9 18 35 31 31 24 32 31 30 31 34 32 31 31 22 33 39 9 13 11 18 27 31 19 36 11 31 30 33 21 18 21 23 19 7 7 10 20 44 44 44 8 9 21 44 27 8 19 25 26 33 34 12 33 21 17 41 18 27 9 17 18 48 34 19 32 33 28 14 33 20 20 23 18 11 11 9 12 30 27 22 16 10 17 17 33 9 31 32 8 21 14 18 24 31 14 6 33 11 23 23 22 6 8 4 11 17 22 33 19 31 24 20 43 31 28 7 20 10 7 8 7 7 34 13 13 33 29 28 9 29 20 23 27 16 13 8 5 20 7 12 11 21 4 14 24 24 40 21 6 6 6 5 9 19 20 27 9 8 8 15 7 14 16 9 5 8 9 11 12 6 14 24 27 23 18 11 6 25 13 6 4 14 16 10 8 7 14 14 22 17 10 25 9 6 3 7 18 4 5 15 5 10 8 9 23 7 4 3 4 8 15 8 10 9 22 9 5 4 4 11 4 1 2 12 6 7 5 11 12 5 10 11 5 5 4 8 9 8 6 6 10 4 3 2 2 9 12 4 1 1 3 2 2 1 2 6 6 5 7 7 4 5 9 5 21 5 5 13 3 1 2 6 12 4 4 6 6 6 16 5 4 6 11 4 3 4 3 2 1 4 16 7 8 10 17 6 16 5 5 5 15 9 12 4 6 4 6 5 16 4 2 1 3 3 4 7 5 8 7 7 5 5 10 1 1 2 8 3 3 4 10 4 5 14 16 3 2 2 3 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_16687186_16688266
seq2: B6Ng01-284A13.b_178_1250

seq1  CATTCCTATTCAACATTGTTCTTGAATTCCTAGCCAGAGCAATTCGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTATTCAACATTGTTCTTGAATTCCTAGCCAGAGCAATTCGACAA  50

seq1  CAAAAGGAGATCAAGGGGATACAAAATGGAAAAGAGGAAGTCAAAGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAGATCAAGGGGATACAAAATGGAAAAGAGGAAGTCAAAGCTTG  100

seq1  TTTTTCTTAATGAGAGACAGAAAGGGAATAGGTAGAGAAAGGAGGAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTAATGAGAGACAGAAAGGGAATAGGTAGAGAAAGGAGGAGATT  150

seq1  TGAATAGAAACTAGGGAAAGTAGAGGAAAGTGAAAACATAATTAGGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGAAACTAGGGAAAGTAGAGGAAAGTGAAAACATAATTAGGATAT  200

seq1  ATTATGTGAGAAAAAGTCCATTTTCAATAAAAGGAGAGAAAACTGTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGAGAAAAAGTCCATTTTCAATAAAAGGAGAGAAAACTGTGCTT  250

seq1  GTATAAATTCTTTATTCTAGCAATTCAACTTTGTAGTGTATCCTATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAATTCTTTATTCTAGCAATTCAACTTTGTAGTGTATCCTATTGTT  300

seq1  ATTCTTAAAGGAATTTTGTTGTATATTTCACATGATACAATAACACAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAAGGAATTTTGTTGTATATTTCACATGATACAATAACACAATC  350

seq1  TTCTGTGTAATAGGAAAATATGGAAAAGAAACTAAATTTTTATCAAGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTAATAGGAAAATATGGAAAAGAAACTAAATTTTTATCAAGGTG  400

seq1  GCTAAGAAATTAATTTACATTACATATATAGTATGAACTATCATACAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAATTAATTTACATTACATATATAGTATGAACTATCATACAACT  450

seq1  GCAACAACTTAAAGTAGCTCTTTGTACACTAAAATAGAATGATGTTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAACTTAAAGTAGCTCTTTGTACACTAAAATAGAATGATGTTCTTG  500

seq1  GACAAACCCTGTGAAAGAACAGATTACGTTGCTTATGATAGAGTTTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACCCTGTGAAAGAACAGATTACGTTGCTTATGATAGAGTTTTCAT  550

seq1  GCATGCATAAATGCTGGGAGTGGAAGTATTCTCATTTGAGAAAATTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCATAAATGCTGGGAGTGGAAGTATTCTCATTTGAGAAAATTGAAG  600

seq1  GTACTCAAATAATTGGCTTTTGGAGGAATGAAGTATCCACACGCTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAAATAATTGGCTTTTGGAGGAATGAAGTATCCACACGCTGGTCT  650

seq1  CCCCCCTTAGAATAGGGGACAAAATACCCATGAAAGGAGTTACAGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTTAGAATAGGGGACAAAATACCCATGAAAGGAGTTACAGAGACA  700

seq1  AAGTTTGGAGCTAAGATGAAAGGATGGACTATCCAGAGACTACCCCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGAGCTAAGATGAAAGGATGGACTATCCAGAGACTACCCCACCC  750

seq1  AGGGATCCATCCTATAATCAGCCACCAAACCCAGACACTATTGCATATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCCATCCTATAATCAGCCACCAAACCCAGACACTATTGCATATGC  800

seq1  CAGCAATAGTGATTTTGCTGAAGGGACCCTGTTATAGCTGTCTCGTATGA  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGCAATAGTGATTTTGCTGAA-GGACCCTGTTATAGCTGTCTCGTATGA  849

seq1  GGCTATGCCAGTGCCTGAGAAATACAGAAGTGAATGGAACAGTCA-TCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||| | ||
seq2  GGCTATGCCAGTGCCTGAGAAATACAGAAGTGAATGGAACAGTCATTTTA  899

seq1  TAGGCTGGAACAAAGGGCCCCCAATGGA-GGAGCTAGTGAAAGCACCCAA  948
      || |||||||||||||| |||||||||| |||||||||||||||||||||
seq2  TA-GCTGGAACAAAGGG-CCCCAATGGAGGGAGCTAGTGAAAGCACCCAA  947

seq1  GGAACTAAAGGAATCTGCAACCCTATAGGTACAACAACAATA-TGAACTA  997
      |  ||||||||||||||| |||||||||||||||| |||||| |||||||
seq2  G--ACTAAAGGAATCTGCTACCCTATAGGTACAAC-ACAATATTGAACTA  994

seq1  ACCAGTAACCCCAGAGCTCGTGTCTCTAGCTGCTTTTGTAGCAGAAGATG  1047
      | |||||||||  |||||||  |||||| |   | ||||| |  ||||  
seq2  A-CAGTAACCC--GAGCTCGGTTCTCTAAC--GTCTTGTACC--AAGAAT  1037

seq1  GCCTAGTCGGCCACCATTGAG-AAGAGA---TGCCCCT  1081
      | ||| ||||||||||| ||| ||||||   |||||||
seq2  G-CTA-TCGGCCACCATGGAGAAAGAGAAAGTGCCCCT  1073

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information