BAC Information

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BAC

Clone NameB6Ng01-284H15
Chromosome17 (Build37)
Map Location 23,264,615 - 23,265,285
singlet/doubletsinglet
Overlap genenone
Upstream geneEG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225
Downstream geneLOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik, Pkmyt1, Paqr4, Kremen2, 9530082P21Rik, Flywch1, 2810417J12Rik, LOC100042865, Srrm2, Tceb2, Prss33, 4931440B09Rik, Prss32, Prss21, Dcpp1, LOC666157, Dcpp2, LOC620233, Dcpp3, Sbp, Sbpl, Tmprss8, Prss22, LOC100042414, LOC383225, Prss27, Kctd5, Pdpk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284H15.bB6Ng01-284H15.g
ACCGA083168GA083169
length6711,197
definitionB6Ng01-284H15.b B6Ng01-284H15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaacaccatcttccccctagaaccttagttctcaattatcaa
tatattgtatcgatacatttcttttaatttttcttagatttcctatgctg
cttttgcttgatttacattccagtagtggctgtgagaaaaatgatttagg
cattggtaaagacttcctcagcaggactccacctcacttgtttgggaaaa
aaggccaacaactgtcttttaagagttcataagaagaggaggaggaggaa
gaggaagaggggaggagaaggaagagaaagaagaagaaagtaaaaagaaa
gaaagaaagaaagaaagaaagaaagaaagacccaaaagtattgaataaat
gagcactcaacaaaatggaagaaaatcattgcacaatatacgtgtgacag
aggattaaaatccataatatataaaaacctcagaagactaaataacaaaa
aattcagacaatatggttattaaatgggctaatgaaataacagtttccaa
atgatgaaatgtagggtcccggatccctcagagacaagtctgcacaggtg
agagtgtggactacataagctacacagcttctgagacaggccctgtttcg
agccttcatcttcaagcagtaggcaggtctgaatgccagatatctgtgca
ccttcccttgtagaggagagc
gaattctcacctgaggaatactgaatggcagagaagcacctgagaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgggtaagaaggacacatgctccactatgttcatag
cagccttatttataatagccagaagctggaaagaacctagatgcccctca
acagaggaatggatacagaaaatgtggtacatctacacaatggagtacta
ctcagctatcaaaaagaatgaatttatgaaattcctagccaaatggatgg
acctggagggcatcatcctgagtgaggtaacacattcacaaagaaactca
cacaatatgtactcactgataagtggatattagccccaaatgtaggatac
ccaagatataagatataatttgctaaacacatgaaactcaagaagaatga
agactgaagtgtggacactatgcccctccttagatttgggaacaaaacac
ccatggaaggagttacagagacaaagtttggagctgagatgaaaggatgg
accatatagagactgccatatccagggatccaccccataatcagcatcca
aacgctgacaccattgcatacactagcaagatttttactgaaaggaccca
gatgtagctgtctcttgtgagactatgccgggggcctagcaaacacagaa
gttggatgctcacagtcagctaatgggatggggtcattagggctcccagt
tggagggagctaggaagaaaagttagccaaaggagctaaaggggatcttg
caacccttataagtggaccacatatgaactaccagtactcccggtgctct
tggactcttagctgcatttatattccaagatgctagtcgggcatcactgg
caaggaaggccaattggactggcaacctttattgcctaagttacggcact
catgtcccaaaaaggtgggacttgggttggctccaggggtgagacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_23264615_23265285
seq2: B6Ng01-284H15.b_45_715

seq1  GAATTCTAAAACACCATCTTCCCCCTAGAACCTTAGTTCTCAATTATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAACACCATCTTCCCCCTAGAACCTTAGTTCTCAATTATCAA  50

seq1  TATATTGTATCGATACATTTCTTTTAATTTTTCTTAGATTTCCTATGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTATCGATACATTTCTTTTAATTTTTCTTAGATTTCCTATGCTG  100

seq1  CTTTTGCTTGATTTACATTCCAGTAGTGGCTGTGAGAAAAATGATTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTTGATTTACATTCCAGTAGTGGCTGTGAGAAAAATGATTTAGG  150

seq1  CATTGGTAAAGACTTCCTCAGCAGGACTCCACCTCACTTGTTTGGGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTAAAGACTTCCTCAGCAGGACTCCACCTCACTTGTTTGGGAAAA  200

seq1  AAGGCCAACAACTGTCTTTTAAGAGTTCATAAGAAGAGGAGGAGGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAACAACTGTCTTTTAAGAGTTCATAAGAAGAGGAGGAGGAGGAA  250

seq1  GAGGAAGAGGGGAGGAGAAGGAAGAGAAAGAAGAAGAAAGTAAAAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAGGGGAGGAGAAGGAAGAGAAAGAAGAAGAAAGTAAAAAGAAA  300

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGACCCAAAAGTATTGAATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGACCCAAAAGTATTGAATAAAT  350

seq1  GAGCACTCAACAAAATGGAAGAAAATCATTGCACAATATACGTGTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTCAACAAAATGGAAGAAAATCATTGCACAATATACGTGTGACAG  400

seq1  AGGATTAAAATCCATAATATATAAAAACCTCAGAAGACTAAATAACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAAATCCATAATATATAAAAACCTCAGAAGACTAAATAACAAAA  450

seq1  AATTCAGACAATATGGTTATTAAATGGGCTAATGAAATAACAGTTTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGACAATATGGTTATTAAATGGGCTAATGAAATAACAGTTTCCAA  500

seq1  ATGATGAAATGTAGGGTCCCGGATCCCTCAGAGACAAGTCTGCACAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAATGTAGGGTCCCGGATCCCTCAGAGACAAGTCTGCACAGGTG  550

seq1  AGAGTGTGGACTACAGAAGCTACACAGCTTCTGAGACAGGCCCTGTTTCG  600
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGGACTACATAAGCTACACAGCTTCTGAGACAGGCCCTGTTTCG  600

seq1  AGCCTTCATCTTCAAGCAGTAGGCAGGTCCGAATGCCAGATATCTGTGCA  650
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGCCTTCATCTTCAAGCAGTAGGCAGGTCTGAATGCCAGATATCTGTGCA  650

seq1  CCTTCCCTGTAAGAGGAGAGC  671
      ||||||||   ||||||||||
seq2  CCTTCCCTTGTAGAGGAGAGC  671