BAC Information

Click to search

BAC

Clone NameB6Ng01-284N17
Chromosome17 (Build37)
Map Location 91,897,715 - 91,898,825
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235
Downstream geneLOC100043741, LOC100043742, EG640442, LOC627395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284N17.bB6Ng01-284N17.g
ACCGA083455GA083456
length1,1061,148
definitionB6Ng01-284N17.b B6Ng01-284N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctaggctctaccccacagttacctgacatcagccaggtatg
cctggcttactataaaagggggtattagtacccttctctccctcttcttc
tgtgccctttcactttctggcctctttctaaactttccccttctcccctc
tctccacatgtttctggccagcctctcctcctctcctcctctccttcctc
tccatcaccctctctatcccccctcccttcccaactccacttcccatgcc
ctaaataaattctattccatactattttctcatatgactgacacctctgt
agaaagcatgcctcagcatgggcccactgagtcgcctctctcacttcacc
atacttgctctaccaaaacttatccttggcactctttctttttataaaat
acagcaaaggccaaatatgagggacaggtaataagttgacaacatatacc
cactacaaaatttatactagctagttattcattataagtgttaaaataca
ctattttttaatagtacaataaaaaatagattggcaacattatcgaaatt
cagaagctaaagatgtagatactcgtttgagctttttactatattttgta
tttgcaaggaaaccttaaaatcatgatactcacaggtaaatggatggtgc
taggggaaaaaaaaacatcctgtatgagataatacagatccaaaacacaa
atatgatacatatttgtttttatgtagatgttagatgttaagtctttggt
aagcctgctacaatctataaaaccacagaaattaggtagagagtagtaaa
tgaggtttatagatctcttaagttagagtaaatagaatagatggatttaa
atagacacagtgggggtggacaggggcagaaagataaaatggtgagagga
aggcaagatgagtgcaagagaggtaatataggggaggtacaggtaaaact
aagggcatttaagaggtcatgttaaaacccaatgcttcgaaacttctgaa
acaattattacgtatgaaagtgatttaaatgcattgcccaacagaaagag
gtgatctggtgagtgaacacctcccaagtgacctttactgtggacgagtt
acatct

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caatcacccatggaaggagttacagaaacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcttccaaacgctgacaccattgcatatactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggccctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggctcccaat
ggaggagctagagaaagtaccaagagctaaaggatcttcaacctatagtg
acacatatgactaacaataccctgagctctgactctagctgcatatgtat
caaagatgctagtcgcattcacttgaagaagtccaatgacccgcgaactg
atgctgtcgaacgcaggctaacgaggcagattgcgctgtgttagagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91897715_91898825
seq2: B6Ng01-284N17.b_48_1153

seq1  GAATTCCTTCTAGGCTCTACCCCACAGTTACCTGACATCAGCCAGGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTAGGCTCTACCCCACAGTTACCTGACATCAGCCAGGTATG  50

seq1  CCTGGCTTACTATAAAAGGGGGTATTAGTACCCTTCTCTCCCTCTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTACTATAAAAGGGGGTATTAGTACCCTTCTCTCCCTCTTCTTC  100

seq1  TGTGCCCTTTCACTTTCTGGCCTCTTTCTAAACTTTCCCCTTCTCCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTTTCACTTTCTGGCCTCTTTCTAAACTTTCCCCTTCTCCCCTC  150

seq1  TCTCCACATGTTTCTGGCCAGCCTCTCCTCCTCTCCTCCTCTCCTTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATGTTTCTGGCCAGCCTCTCCTCCTCTCCTCCTCTCCTTCCTC  200

seq1  TCCATCACCCTCTCTATCCCCCCTCCCTTCCCAACTCCACTTCCCATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACCCTCTCTATCCCCCCTCCCTTCCCAACTCCACTTCCCATGCC  250

seq1  CTAAATAAATTCTATTCCATACTATTTTCTCATATGACTGACACCTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAATTCTATTCCATACTATTTTCTCATATGACTGACACCTCTGT  300

seq1  AGAAAGCATGCCTCAGCATGGGCCCACTGAGTCGCCTCTCTCACTTCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCATGCCTCAGCATGGGCCCACTGAGTCGCCTCTCTCACTTCACC  350

seq1  ATACTTGCTCTACCAAAACTTATCCTTGGCACTCTTTCTTTTTATAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGCTCTACCAAAACTTATCCTTGGCACTCTTTCTTTTTATAAAAT  400

seq1  ACAGCAAAGGCCAAATATGAGGGACAGGTAATAAGTTGACAACATATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAGGCCAAATATGAGGGACAGGTAATAAGTTGACAACATATACC  450

seq1  CACTACAAAATTTATACTAGCTAGTTATTCATTATAAGTGTTAAAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAAAATTTATACTAGCTAGTTATTCATTATAAGTGTTAAAATACA  500

seq1  CTATTTTTTAATAGTACAATAAAAAATAGATTGGCAACATTATCGAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTTAATAGTACAATAAAAAATAGATTGGCAACATTATCGAAATT  550

seq1  CAGAAGCTAAAGATGTAGATACTCGTTTGAGCTTTTTACTATATTTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTAAAGATGTAGATACTCGTTTGAGCTTTTTACTATATTTTGTA  600

seq1  TTTGCAAGGAAACCTTAAAATCATGATACTCACAGGTAAATGGATGGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAGGAAACCTTAAAATCATGATACTCACAGGTAAATGGATGGTGC  650

seq1  TAGGGGAAAAAAAAACATCCTGTATGAGATAATACAGATCCAAAACACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAAAAAAAAACATCCTGTATGAGATAATACAGATCCAAAACACAA  700

seq1  ATATGATACATATTTGTTTTTATGTAGATGTTAGATGTTAAGTCTTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATACATATTTGTTTTTATGTAGATGTTAGATGTTAAGTCTTTGGT  750

seq1  AAGCCTGCTACAATCTATAAAACCACAGAAATTAGGTAGAGAGTAGTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGCTACAATCTATAAAACCACAGAAATTAGGTAGAGAGTAGTAAA  800

seq1  TGAGGTTTATAGATCTCTTAAGTTAGAGTAAATAGAATAGATGGATTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTATAGATCTCTTAAGTTAGAGTAAATAGAATAGATGGATTTAA  850

seq1  ATAGACACAGTGGGGGTGGACAGGGGCAGAAAGATAAAATGGTGAGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACAGTGGGGGTGGACAGGGGCAGAAAGATAAAATGGTGAGAGGA  900

seq1  AGGCAAGATGAGTGCAAGAGAGGTAATATA-GGGAGGTACAGGTAAAACT  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGCAAGATGAGTGCAAGAGAGGTAATATAGGGGAGGTACAGGTAAAACT  950

seq1  AAGGGCCATTTAAGAGGTCATGTTAAAACCCAATGCCTTCGAAACTTCCT  999
      ||||| ||||||||||||||||||||||||||||| ||||||||||| ||
seq2  AAGGG-CATTTAAGAGGTCATGTTAAAACCCAATG-CTTCGAAACTT-CT  997

seq1  GAAACA--TA-TACGTATGAAAGTGATTTAAATGCAATTGCCAAACAGAG  1046
      ||||||  || |||||||||||||||||||||||| |||||| |||||| 
seq2  GAAACAATTATTACGTATGAAAGTGATTTAAATGC-ATTGCCCAACAGAA  1046

seq1  A-AGGTGGATCT-GTGAGTGAACACCTCCCCAAGTGAACCTTTTACTGTT  1094
      | |||| ||||| |||||||||||||| |||||||||  | |||||||| 
seq2  AGAGGT-GATCTGGTGAGTGAACACCT-CCCAAGTGA--CCTTTACTGT-  1091

seq1  GGGACGAGGTTACATCT  1111
       |||||| |||||||||
seq2  -GGACGA-GTTACATCT  1106


| Home | SequenceCutter | Blast | Download |