BAC Information

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BAC

Clone NameB6Ng01-285H24
Chromosome17 (Build37)
Map Location 84,879,749 - 84,880,677
singlet/doubletsinglet
Overlap genenone
Upstream geneCox7a2l, Kcng3, Mta3, Haao, Zfp36l2, Thada
Downstream genePlekhh2, Dync2li1, Abcg5, Abcg8, Lrpprc, LOC668848, 1110020A21Rik, Ppm1b, Slc3a1, Prepl, LOC100043901, 1700106N22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285H24.bB6Ng01-285H24.g
ACCGA083935GA083936
length276943
definitionB6Ng01-285H24.b B6Ng01-285H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
attaactcctgccagagccactgtggctgctgccacaagatcaagccaat
cgaccctctaacgtggagtatgaagagcaatcgaggccccacctttagtg
gagtgagtactggcggttgatggtcactaggagatggaaagttttctata
gtaatgtgtggatcccatggtggatgctcgtggtccatgtgtgcagttgg
attaactgaacaaagagtggaagaagaaaaagaaggtggggaaggaagaa
gacataatggagttaggggagggggg
gaattctcatctggttgacggataaaggtgtgcaaggactctgctgctca
ggcaagggctctttctagtgcattccacatgcttctctttttctaaatgc
aaataccgctggctgtttgtagcatcgactcttccgcatgaagagaaaca
aaggcgtaattacaagggcttgggaattaatggtactaaatgggtaattt
gggtttcatgttaaatcctggaatggatgacccagggtcagaaagattgg
ctttccaagtgtcacctctgccatctggtggtcaagtgacaatataacca
caacaactgggcattgatactgtcatcacgttagccatctgcgaccttgg
ggtcgggtgaatggattgagtgtgagatctgtctttgtaaggcctgagat
gacaaaataaaatgttaagtatacaaataaaggttaaatgttttccacaa
tatttcagctcagcgtgagaactgtggaaaagtcccttcattcatttctt
caacaaatatttattaaacacggtcttagttggtttccctggaaacagac
ctcaggcagagacatgtgtgagggagggtggatagagactcctcttgaga
gcaacccttgtaagggtttgagggaaaaaagaactagctggaaagagttg
aactgagatgaacttgctgcagaggtctgggccaatcctgctatgagctg
tcaagctggctgggcatgaagactgagcctcgacattttctgtatccagt
cgtccttagactagcccctgagctacgggcagacaatgcgactgtctgaa
agctcccttgaccctgaccgcaaaaccacaccacagtgtccactatagac
attctacgctttgctagagccctagccctaacccaggcatagaaggtgta
gaagtgggggttatagaaccatctctgccctcttaaaagggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_84879749_84880677
seq2: B6Ng01-285H24.g_63_1005

seq1  GAATTCTCATCTGGTTGACGGATAAAGGTGTGCAAGGACTCTGCTGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCTGGTTGACGGATAAAGGTGTGCAAGGACTCTGCTGCTCA  50

seq1  GGCAAGGGCTCTTTCTAGTGCATTCCACATGCTTCTCTTTTTCTAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGGCTCTTTCTAGTGCATTCCACATGCTTCTCTTTTTCTAAATGC  100

seq1  AAATACCGCTGGCTGTTTGTAGCATCGACTCTTCCGCATGAAGAGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCGCTGGCTGTTTGTAGCATCGACTCTTCCGCATGAAGAGAAACA  150

seq1  AAGGCGTAATTACAAGGGCTTGGGAATTAATGGTACTAAATGGGTAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTAATTACAAGGGCTTGGGAATTAATGGTACTAAATGGGTAATTT  200

seq1  GGGTTTCATGTTAAATCCTGGAATGGATGACCCAGGGTCAGAAAGATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCATGTTAAATCCTGGAATGGATGACCCAGGGTCAGAAAGATTGG  250

seq1  CTTTCCAAGTGTCACCTCTGCCATCTGGTGGTCAAGTGACAATATAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAGTGTCACCTCTGCCATCTGGTGGTCAAGTGACAATATAACCA  300

seq1  CAACAACTGGGCATTGATACTGTCATCACGTTAGCCATCTGCGACCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTGGGCATTGATACTGTCATCACGTTAGCCATCTGCGACCTTGG  350

seq1  GGTCGGGTGAATGGATTGAGTGTGAGATCTGTCTTTGTAAGGCCTGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGGTGAATGGATTGAGTGTGAGATCTGTCTTTGTAAGGCCTGAGAT  400

seq1  GACAAAATAAAATGTTAAGTATACAAATAAAGGTTAAATGTTTTCCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATAAAATGTTAAGTATACAAATAAAGGTTAAATGTTTTCCACAA  450

seq1  TATTTCAGCTCAGCGTGAGAACTGTGGAAAAGTCCCTTCATTCATTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGCTCAGCGTGAGAACTGTGGAAAAGTCCCTTCATTCATTTCTT  500

seq1  CAACAAATATTTATTAAACACGGTCTTAGTTGGTTTCCCTGGAAACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATATTTATTAAACACGGTCTTAGTTGGTTTCCCTGGAAACAGAC  550

seq1  CTCAGGCAGAGACATGTGTGAGGGAGGGTGGATAGAGACTCCTCTTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCAGAGACATGTGTGAGGGAGGGTGGATAGAGACTCCTCTTGAGA  600

seq1  GCAACCCTTGTAAGGGTTTGAGGGAAAAAAGAACTAGCTGGAAAGAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTTGTAAGGGTTTGAGGGAAAAAAGAACTAGCTGGAAAGAGTTG  650

seq1  AACTGAGATGAACTTGCTGCAGAGGTCTGGGCCAATCCTGCTATGAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGATGAACTTGCTGCAGAGGTCTGGGCCAATCCTGCTATGAGCTG  700

seq1  TCAAGCTGGCTGGGCATGAAGACTGAGCCTCGACA-TTTCTGTATCCAGT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCAAGCTGGCTGGGCATGAAGACTGAGCCTCGACATTTTCTGTATCCAGT  750

seq1  CGTCCTTAGACTAG-CCCTGAGCTAC-GGCAGACAATGCGACTGTCTG-A  796
      |||||||||||||| ||||||||||| ||||||||||||||||||||| |
seq2  CGTCCTTAGACTAGCCCCTGAGCTACGGGCAGACAATGCGACTGTCTGAA  800

seq1  AGCT-CCTTGACCCTGACCGCAGAACCACACCACAGTGTCCACTATAGAC  845
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGCTCCCTTGACCCTGACCGCAAAACCACACCACAGTGTCCACTATAGAC  850

seq1  A-TCTACGC-TTGCTAGAGCCCTAGCCCTAA-CCAGGCATAG-AGGTGTA  891
      | ||||||| ||||||||||||||||||||| |||||||||| |||||||
seq2  ATTCTACGCTTTGCTAGAGCCCTAGCCCTAACCCAGGCATAGAAGGTGTA  900

seq1  G-AGT-GGGGTTATAG-ACCATCTCTG-CCTCTT-AAAGGGAT  929
      | ||| |||||||||| |||||||||| |||||| ||||||||
seq2  GAAGTGGGGGTTATAGAACCATCTCTGCCCTCTTAAAAGGGAT  943