BAC Information

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BAC

Clone NameB6Ng01-285J15
Chromosome17 (Build37)
Map Location 61,191,589 - 61,320,786
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285J15.bB6Ng01-285J15.g
ACCGA084010GA084011
length1,1291,115
definitionB6Ng01-285J15.b B6Ng01-285J15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,319,653 - 61,320,786)(61,191,589 - 61,192,707)
sequence
gaattctgacagaaaaggaactactctgattagctgtatatccactggta
atcccagcaagctccattggattgttccaaatccattataacacctatgg
ctttagataaactcattggttcttgcaacacaaagagacatggacacgag
aaagagacttttagcaagaagggtgggtacactgtcgtaggagggagatg
acaggagataagtatgagaatagtcagatgacttatagaaatgtaagaga
ttgtcaaagccatttttaattattaataaaaataacaacagcaaaacaaa
tatcaataatttaaaagcacttaagcctcttgatcttgctagtgatggtg
tgtataactttaattgtagaacttaggaggcagaggaaaccttgtctcaa
aaaacaaaatgaaaggaaagaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaggacggaaggaagaaagaaatataaattcattacttcttgaa
aatagcacttgaatatttgccatcctgtaacatgcttgattgtttgatca
tctgaataaaaaatatgtgtgtaatatgtaggattgctaccatgaaaaca
cacaaatgatgtgttagattggcctgtccatatgaaatgtggtattactg
agctccctcgtgcttttctgaagctttagttgtatttctaggtatgtgtg
taagaagcaggaaataaacttaggcagtgagcaagagttcatactaaggt
catgtatgcaaaatttccacaagcagaatgaaatgaaatgttgatgcttc
atactccatagaggatgtaggttggacagtgactcaaatgtaggacagag
tacctgactgcacactggaaatcatctggtgtctaaacaagaaaaggtat
tctacacaaatccatgtcctttagttttgttgttctttagaaatcactca
gacacagcacaatctttattctaaaaggacatgtgctatttcttttgctt
tctatagagcatagtagtttttattatgcagaggacagctatattatgtc
ttttagtatcatcatacacatgcttcttattcatacaaagaaaagttgcc
accttcaaatgctatgttatttggcatct

gaattcttctcagccctgcccaaagctttactggtgcatgatccatattg
cacattttcataggcatcataggaattgcttctataagacatcttggaac
tcctcttcctcaaatctcctgattgttctctcggtgtccagtgatacact
gctctctttaaccaaatccaccatctggacacaagccaatgaaacatggt
ttaaccttacgctaaattagttaatttaagttttgttccaactatttact
gtttgaacatcatcataaaatggagttacttcaaataaagctttatttct
taattatgagttttctgtggacagtggattaatctatttgtaataccagc
tttaacggtaatttctaattcatccattccaatttgaagcatttctgaga
tatttaaaaactatgactttctttcattgccagattctcctataaacaag
cattattctgttctctgacccatttttttttttttgtagaaaaaatgacc
ttgatagacgttggcaaattcaaggagccaaagcacttcgaatgcttctg
taataaatatgattcatttgttaataatagatgggcaaagcatacactac
caaaccattaaacaaggtgtgaaaaagctttgaaaagaaaaatattctaa
gaaatacaagtaaccttaatcttgctcagtctgccaaagtaactgaaagc
catatttactgacttgttttgtgtcaatttgacccaagctagactcagca
gagaagaagcagtctcaatagaggaaatgacaccatgagacccagctccc
agctgaaaggtattttcttaattcataattgatagggagagtccaggccc
ccttgtttcctgggttttgtaagaaagcaggctgagcaaaccagggatag
catatcagtaagcaaaatgattccacagcctctgcttcagctcttgtctc
caggatacaacaagcaaagggatagccagtctagtgaggaaaggaataca
ctaatttatgcgaatggtgagaatttttgtgtgagtgtgtcacagcctgg
ttctggacattgggttatatgctggaaacagactttcagttgagctctct
taggatagtgggcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61319653_61320786
seq2: B6Ng01-285J15.b_43_1171 (reverse)

seq1  AGATGCAAAAT-ACATAGCATTTGAAAGTTGC-ACTTTTCTTTGTATGA-  47
      |||||| |||| |||||||||||||| || || |||||||||||||||| 
seq2  AGATGCCAAATAACATAGCATTTGAAGGTGGCAACTTTTCTTTGTATGAA  50

seq1  -TAGAACCATTGTGTATGGATGGAATACTTAAAAGGACAT-ATATAGCTG  95
        |||| || ||||||| ||||  |||||  ||| ||||| |||||||||
seq2  TAAGAAGCA-TGTGTAT-GATG--ATACT--AAAAGACATAATATAGCTG  94

seq1  TCCTCTGCAT-ATAAAAACTACTATGCCTCTAATAAGAAAAGCAAAAGAA  144
      |||||||||| ||||||||||||||| |||| |||   ||||||||||||
seq2  TCCTCTGCATAATAAAAACTACTATG-CTCT-ATA--GAAAGCAAAAGAA  140

seq1  ATAAGCAACATGTCCTTTTAGAATAAAGATTGTGCTGTGTCTGAGTGATT  194
      || ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AT-AGC-ACATGTCCTTTTAGAATAAAGATTGTGCTGTGTCTGAGTGATT  188

seq1  TCTAAAGAACAACAAAACTAAAGGACATGGATTTGTGTAGAATACC-TTT  243
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTAAAGAACAACAAAACTAAAGGACATGGATTTGTGTAGAATACCTTTT  238

seq1  CTTGTTTAGACACCAGATGATTTCCAGTGTGCAGTCAGGTACTCTGTCCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTAGACACCAGATGATTTCCAGTGTGCAGTCAGGTACTCTGTCCT  288

seq1  ACATTTGAGTCACTGTCCAACCTACATCCTCTATGGAGTATGAAGCATCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAGTCACTGTCCAACCTACATCCTCTATGGAGTATGAAGCATCA  338

seq1  ACATTTCATTTCATTCTGCTTGTGGAAATTTTGCATACATGACCTTAGTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCATTTCATTCTGCTTGTGGAAATTTTGCATACATGACCTTAGTA  388

seq1  TGAACTCTTGCTCACTGCCTAAGTTTATTTCCTGCTTCTTACACACATAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTTGCTCACTGCCTAAGTTTATTTCCTGCTTCTTACACACATAC  438

seq1  CTAGAAATACAACTAAAGCTTCAGAAAAGCACGAGGGAGCTCAGTAATAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATACAACTAAAGCTTCAGAAAAGCACGAGGGAGCTCAGTAATAC  488

seq1  CACATTTCATATGGACAGGCCAATCTAACACATCATTTGTGTGTTTTCAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCATATGGACAGGCCAATCTAACACATCATTTGTGTGTTTTCAT  538

seq1  GGTAGCAATCCTACATATTACACACATATTTTTTATTCAGATGATCAAAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAATCCTACATATTACACACATATTTTTTATTCAGATGATCAAAC  588

seq1  AATCAAGCATGTTACAGGATGGCAAATATTCAAGTGCTATTTTCAAGAAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGCATGTTACAGGATGGCAAATATTCAAGTGCTATTTTCAAGAAG  638

seq1  TAATGAATTTATATTTCTTTCTTCCTTCCGTCCTTCCTTCCTTCCTTCCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATTTATATTTCTTTCTTCCTTCCGTCCTTCCTTCCTTCCTTCCT  688

seq1  TCCTTCCTTCCTTCCTTCCTTCTTTCCTTTCATTTTGTTTTTTGAGACAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTCTTTCCTTTCATTTTGTTTTTTGAGACAA  738

seq1  GGTTTCCTCTGCCTCCTAAGTTCTACAATTAAAGTTATACACACCATCAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCTCTGCCTCCTAAGTTCTACAATTAAAGTTATACACACCATCAC  788

seq1  TAGCAAGATCAAGAGGCTTAAGTGCTTTTAAATTATTGATATTTGTTTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGATCAAGAGGCTTAAGTGCTTTTAAATTATTGATATTTGTTTTG  838

seq1  CTGTTGTTATTTTTATTAATAATTAAAAATGGCTTTGACAATCTCTTACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTATTTTTATTAATAATTAAAAATGGCTTTGACAATCTCTTACA  888

seq1  TTTCTATAAGTCATCTGACTATTCTCATACTTATCTCCTGTCATCTCCCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAAGTCATCTGACTATTCTCATACTTATCTCCTGTCATCTCCCT  938

seq1  CCTACGACAGTGTACCCACCCTTCTTGCTAAAAGTCTCTTTCTCGTGTCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACGACAGTGTACCCACCCTTCTTGCTAAAAGTCTCTTTCTCGTGTCC  988

seq1  ATGTCTCTTTGTGTTGCAAGAACCAATGAGTTTATCTAAAGCCATAGGTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTTTGTGTTGCAAGAACCAATGAGTTTATCTAAAGCCATAGGTG  1038

seq1  TTATAATGGATTTGGAACAATCCAATGGAGCTTGCTGGGATTACCAGTGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGGATTTGGAACAATCCAATGGAGCTTGCTGGGATTACCAGTGG  1088

seq1  ATATACAGCTAATCAGAGTAGTTCCTTTTCTGTCAGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGCTAATCAGAGTAGTTCCTTTTCTGTCAGAATTC  1129


seq1: chr17_61191589_61192707
seq2: B6Ng01-285J15.g_66_1180

seq1  GAATTCTTCTCAGCCCTGCCCAAAGCTTTACTGGTGCATGATCCATATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCAGCCCTGCCCAAAGCTTTACTGGTGCATGATCCATATTG  50

seq1  CACATTTTCATAGGCATCATAGGAATTGCTTCTATAAGACATCTTGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTCATAGGCATCATAGGAATTGCTTCTATAAGACATCTTGGAAC  100

seq1  TCCTCTTCCTCAAATCTCCTGATTGTTCTCTCGGTGTCCAGTGATACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCCTCAAATCTCCTGATTGTTCTCTCGGTGTCCAGTGATACACT  150

seq1  GCTCTCTTTAACCAAATCCACCATCTGGACACAAGCCAATGAAACATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTTAACCAAATCCACCATCTGGACACAAGCCAATGAAACATGGT  200

seq1  TTAACCTTACGCTAAATTAGTTAATTTAAGTTTTGTTCCAACTATTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTACGCTAAATTAGTTAATTTAAGTTTTGTTCCAACTATTTACT  250

seq1  GTTTGAACATCATCATAAAATGGAGTTACTTCAAATAAAGCTTTATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAACATCATCATAAAATGGAGTTACTTCAAATAAAGCTTTATTTCT  300

seq1  TAATTATGAGTTTTCTGTGGACAGTGGATTAATCTATTTGTAATACCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGAGTTTTCTGTGGACAGTGGATTAATCTATTTGTAATACCAGC  350

seq1  TTTAACGGTAATTTCTAATTCATCCATTCCAATTTGAAGCATTTCTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACGGTAATTTCTAATTCATCCATTCCAATTTGAAGCATTTCTGAGA  400

seq1  TATTTAAAAACTATGACTTTCTTTCATTGCCAGATTCTCCTATAAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAAACTATGACTTTCTTTCATTGCCAGATTCTCCTATAAACAAG  450

seq1  CATTATTCTGTTCTCTGACCCATTTTTTTTTTTTTGTAGAAAAAATGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCTGTTCTCTGACCCATTTTTTTTTTTTTGTAGAAAAAATGACC  500

seq1  TTGATAGACGTTGGCAAATTCAAGGAGCCAAAGCACTTCGAATGCTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGACGTTGGCAAATTCAAGGAGCCAAAGCACTTCGAATGCTTCTG  550

seq1  TAATAAATATGATTCATTTGTTAATAATAGATGGGCAAAGCATACACTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATATGATTCATTTGTTAATAATAGATGGGCAAAGCATACACTAC  600

seq1  CAAACCATTAAACAAGGTGTGAAAAAGCTTTGAAAAGAAAAATATTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATTAAACAAGGTGTGAAAAAGCTTTGAAAAGAAAAATATTCTAA  650

seq1  GAAATACAAGTAACCTTAATCTTGCTCAGTCTGCCAAAGTAACTGAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACAAGTAACCTTAATCTTGCTCAGTCTGCCAAAGTAACTGAAAGC  700

seq1  CATATTTACTGACTTGTTTTGTGTCAATTTGACCCAAGCTAGACTCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTACTGACTTGTTTTGTGTCAATTTGACCCAAGCTAGACTCAGCA  750

seq1  GAGAAGAAGCAGTCTCAATAGAGGAAATGACACCATGAGACCCAGCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGCAGTCTCAATAGAGGAAATGACACCATGAGACCCAGCTCCC  800

seq1  AGCTGAAAGGTATTTTCTTAATTCATAATTGATAGGGAGAGTCCAGGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGGTATTTTCTTAATTCATAATTGATAGGGAGAGTCCAGGCCC  850

seq1  CCTTGTTTCCTGGGTTTTGTAAGAAAGCAGGCTGAGCAAACCAGGGATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTCCTGGGTTTTGTAAGAAAGCAGGCTGAGCAAACCAGGGATAG  900

seq1  CATATCAGTAAGCAAAATGATTCCACAGCCTCTGCTTCAGCTCTTGTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAGTAAGCAAAATGATTCCACAGCCTCTGCTTCAGCTCTTGTCTC  950

seq1  CAGGATACAACAAAGCAAGGGATAGCCAGTCTAGTGAGGAAAGGAATACA  1000
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  CAGGATACAACAAGCAAAGGGATAGCCAGTCTAGTGAGGAAAGGAATACA  1000

seq1  CTAATTTATGCGAATGGTGAG-ATTTTTGTGTGAGTGTTGTCACAGCCTT  1049
      ||||||||||||||||||||| ||||||||||||||| ||||||||||| 
seq2  CTAATTTATGCGAATGGTGAGAATTTTTGTGTGAGTG-TGTCACAGCCTG  1049

seq1  GGTCTTGGAACATTGGGTTATATGCTGGAAACAGGACTTTCAGTGGAGCC  1099
      | |||  | |||||||||||||||||||||||| |||||||||| ||| |
seq2  GTTCT--GGACATTGGGTTATATGCTGGAAACA-GACTTTCAGTTGAG-C  1095

seq1  TCTCTAAAGATAGTGGGCCA  1119
      ||||| | ||||||||||||
seq2  TCTCTTAGGATAGTGGGCCA  1115


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