MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-287O03
Chromosome	17 (Build37)
Map Location	79,315,705 - 79,421,896
singlet/doublet	doublet
Overlap gene	Cebpz, 2410091C18Rik, Prkcn
Upstream gene	LOC668795, LOC383275, Crim1, Fez2, LOC100043888, Hdac1-ps, Vit, Strn, Heatr5b, 2310002B06Rik, EG625054, Eif2ak2, 2410078J06Rik
Downstream gene	LOC675425, Qpct, LOC668812, LOC383277, Cdc42ep3, LOC639964, AW061290, Cyp1b1, EG668821, Arl6ip2, LOC625074
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668795 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668795
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC383275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Crim1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50766 MGI:1354756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fez2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225020 MGI:2675856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hdac1-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:15181
definition	gene_synonym : HD1; Hdac1; RPD3 note : histone deacetylase 1 pseudogene pseudo : _no_value

name	Vit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74199 MGI:1921449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Strn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268980 MGI:1333757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heatr5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320473 MGI:2444098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53951 MGI:1858435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625054 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625054 MGI:3644071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Eif2ak2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19106 MGI:1353449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410078J06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73671 MGI:1920921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	Cebpz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12607 MGI:109386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410091C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73694 MGI:1920944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Prkcn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75292 MGI:1922542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675425 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675425
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Qpct (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70536 MGI:1917786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC383277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	Cdc42ep3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:260409 MGI:2384718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC639964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	AW061290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381110 MGI:2147043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp1b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13078 MGI:88590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668821 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Arl6ip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC625074 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins pseudo : _no_value

name	Crim1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131067 GeneID:50766 MGI:1354756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine rich transmembrane BMP regulator 1 (chordin like) transcript_id : NM_015800.2

name	Fez2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130929 GeneID:225020 MGI:2675856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fasciculation and elongation protein zeta 2 (zygin II) transcript_id : NM_199448.2

name	LOC100043888 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268917 GeneID:100043888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043888 transcript_id : XM_001481193.1

name	Vit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037354 GeneID:74199 MGI:1921449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vitrin transcript_id : NM_028813.1

name	Strn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098077 GeneID:268980 MGI:1333757
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : striatin, calmodulin binding protein transcript_id : NM_011500.2

name	Heatr5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487156 GeneID:320473 MGI:2444098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 5B transcript_id : NM_001081179.1

name	2310002B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130682 GeneID:53951 MGI:1858435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310002B06 gene transcript_id : NM_181649.4

name	Eif2ak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227203 GeneID:19106 MGI:1353449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2-alpha kinase 2 transcript_id : NM_011163.3

name	2410078J06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268919 GeneID:73671 MGI:1920921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : RIKEN cDNA 2410078J06 gene, transcript variant 1 transcript_id : XM_356960.5

name	Cebpz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006993 GeneID:12607 MGI:109386
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCAAT/enhancer binding protein zeta transcript_id : NM_001024806.2

name	2410091C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385424 GeneID:73694 MGI:1920944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410091C18 gene transcript_id : NM_028611.2

name	2410091C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450839 GeneID:73694 MGI:1920944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410091C18 gene transcript_id : NM_144760.1

name	Prkcn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753988 GeneID:75292 MGI:1922542
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, nu transcript_id : NM_029239.2

name	Qpct (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353769 GeneID:70536 MGI:1917786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaminyl-peptide cyclotransferase (glutaminyl cyclase) transcript_id : NM_027455.2

name	Cdc42ep3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367815 GeneID:260409 MGI:2384718
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC42 effector protein (Rho GTPase binding) 3 transcript_id : NM_026514.2

name	LOC639964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268817 GeneID:639964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to MOB1, Mps One Binder kinase activator-like 2B (yeast) transcript_id : XM_001480729.1

name	AW061290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376382 GeneID:381110 MGI:2147043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW061290 transcript_id : NM_201361.2

name	Cyp1b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753567 GeneID:13078 MGI:88590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 1, subfamily b, polypeptide 1 transcript_id : NM_009994.1

name	EG668821 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402172 GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668821 transcript_id : XM_001003779.1

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372303 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_178050.3

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372299 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_019717.2

name	Crim1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71895029 CCDS:CCDS28976.1 GeneID:50766 MGI:1354756
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : cysteine-rich motor neuron 1 product : cysteine rich transmembrane BMP regulator 1 (chordin like) protein_id : NP_056615.1

name	Fez2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789098 CCDS:CCDS28977.1 GeneID:225020 MGI:2675856
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : zygin 2 product : fasciculation and elongation protein zeta 2 (zygin II) protein_id : NP_955519.1

name	LOC100043888 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268918 GeneID:100043888
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481243.1

name	Vit (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037355 GeneID:74199 MGI:1921449
definition	codon_start : 1 product : vitrin protein_id : NP_083089.1

name	Strn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098078 CCDS:CCDS28978.1 GeneID:268980 MGI:1333757
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 product : striatin, calmodulin binding protein protein_id : NP_035630.2

name	Heatr5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487157 GeneID:320473 MGI:2444098
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : HEAT repeat containing 5B protein_id : NP_001074648.1

name	2310002B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62461575 CCDS:CCDS28979.1 GeneID:53951 MGI:1858435
definition	codon_start : 1 product : hypothetical protein LOC53951 protein_id : NP_857632.2

name	Eif2ak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755160 CCDS:CCDS28980.1 GeneID:19106 MGI:1353449
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006412 - protein biosynthesis [Evidence IDA]; GO:0009615 - response to virus [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 note : protein kinase, interferon inducible double stranded RNA dependent; T-cell viral integration site; eukaryotic translation initiation factor 2 alpha kinase 2; eIF-2 alpha; dsRNA-activated kinase; IFN- type I-induced and dsRNA-activated kinase; IFN-induced and double-stranded RNA-activated kinase product : protein kinase, interferon-inducible double stranded RNA dependent protein_id : NP_035293.1

name	2410078J06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268920 GeneID:73671 MGI:1920921
definition	codon_start : 1 product : hypothetical protein LOC73671 isoform 1 protein_id : XP_356960.5

name	Cebpz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67188876 CCDS:CCDS28981.1 GeneID:12607 MGI:109386
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CCAAT/enhancer binding protein alpha (C/EBP) related sequence 1; CCAAT-binding factor product : CCAAT/enhancer binding protein zeta protein_id : NP_001019977.1

name	2410091C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229156 CCDS:CCDS28982.1 GeneID:73694 MGI:1920944
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC73694 isoform 1 protein_id : NP_082887.1

name	2410091C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450840 GeneID:73694 MGI:1920944
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC73694 isoform 2 protein_id : NP_658905.1

name	Prkcn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753989 GeneID:75292 MGI:1922542
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : protein kinase D3 protein_id : NP_083515.2

name	Qpct (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625782 CCDS:CCDS28983.1 GeneID:70536 MGI:1917786
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016603 - glutaminyl-peptide cyclotransferase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : glutaminyl-peptide cyclotransferase (glutaminyl cyclase) protein_id : NP_081731.1

name	Cdc42ep3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386006 CCDS:CCDS28984.1 GeneID:260409 MGI:2384718
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008360 - regulation of cell shape [Evidence IEA] codon_start : 1 product : CDC42 effector protein (Rho GTPase binding) 3 protein_id : NP_080790.1

name	LOC639964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268818 GeneID:639964
definition	codon_start : 1 product : similar to MOB1, Mps One Binder kinase activator-like 2B (yeast) protein_id : XP_001480779.1

name	AW061290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235741 CCDS:CCDS28985.1 GeneID:381110 MGI:2147043
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC381110 protein_id : NP_958749.1

name	Cyp1b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753568 CCDS:CCDS28986.1 GeneID:13078 MGI:88590
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, 1b1, benz[a]anthracene inducible product : cytochrome P450, family 1, subfamily b, polypeptide 1 protein_id : NP_034124.1

name	EG668821 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402173 GeneID:668821 MGI:3644108
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003779.1

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372300 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 1 protein_id : NP_062691.3

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372304 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 2 protein_id : NP_835151.2

name	LOC668795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668795
definition	number : 1 pseudo : _no_value

name	LOC383275 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383275
definition	number : 1 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 1 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 2 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 3 pseudo : _no_value

name	LOC383277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383277
definition	number : 3 pseudo : _no_value

name	LOC383277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383277
definition	number : 2 pseudo : _no_value

name	LOC383277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383277
definition	number : 1 pseudo : _no_value

name	EG625054 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:126090591 GeneID:625054 MGI:3644071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625054 pseudo : _no_value transcript_id : NR_003363.1

name	LOC668812 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268816 GeneID:668812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_034816.1

name	LOC625074 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268921 GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins product : similar to eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa pseudo : _no_value transcript_id : XR_035043.1

clone name	MSMg01-452H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-192B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-329E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-447N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-287O03.b	B6Ng01-287O03.g
ACC	GA085689	GA085690
length	1,067	1,055
definition	B6Ng01-287O03.b	B6Ng01-287O03.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(79,420,759 - 79,421,896)	(79,315,705 - 79,316,769)
sequence	gaattcagctcaatgaaatatttatgtgtaaagtatgtatttcgcataaa cacttaaatctctgtagagcagcagtttagttctttgagaaagttacacc tatgaaaagtaactgtttcttaagggccacagcagaaaatggaagtctag agttggttcaaactgaatgcaaattgctctgatgagatcctgcgagtctt gctgagagaagatattcctggctgggccaaaacatctattgtgaagaaga gagaaagagagaaagaaagaaagaaagagagaaagagagaaagagagaaa gagagaaagagagaaagagagaaagagagaaagaaagaaagaaagaaaga aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa gaaagaaagaaagaagagagcagttaggcaagggaacgcttaagaagagg gtacactggaatgaatctgcttttaatcttaaagtaaaagaatcacaaaa tatatttaaagagtctctgtctctctccctctcctccctccctcgctccc tgccctccaccaccaccattttgatcatattcacaacccataccctactc aattgagccccttctgaactgggccctttcctttgacaccttttttgttt agttagggttgcctgcattagtgtgagtggtgtctgggtaagactttaag aacaaagatgtaatcagatttagattttagtggatgttggcagtttccga ttccagagaaatgtccgaaatgtcctcccaccccttaacgctccctgtag aaaagattatacacagttttgttttaaagcctcactccctaggagacgag ctgcagctagtagtatggtcagtgcttagctctcagtgacttgtgagtgg tcgtctcccatttctatccctggggggcagagagtctcactaattcatca gactatcatatattacgatcgtaacggatatctccctatgtctcaaagct gcctccaccccgctctgcatccagacgatgccttatggacaatattttac ttgagattaacgtcgac	gaattcttttacttgggtgtgaccgcgggcaggataaccttgcctaaacg ataccagcttcccacagctagttaggtcaggttcctctgtggggcgtggc taaagctgggggcgtggcgctaagaccgtgcgcttgcgcagtcgggttgc ggaggcctcaggtaaggaccgggcagtgtttcttgtcctctgttccccaa tgtgtggcgcgtggggtctgtgacattcttgggtgtggggaacactcgag cgagcccgccccgcaggcgcaggagcgcgagcgtttccgggtcgccgagc cgcgacgcatgctgggaccaggaccccgggtaaggctgggtgctcgctgt tggatccttgcagggcagcagcccccggtcgcagcgccgcctttcctccc tcgggcctacactggagcacacgcagggttgcttctcctgcgctgcagcc ccaggcgctcctgtgcaacaaggctccgtggtctttggtctccctgagcc atcttgtctggacagtgtgtctctggtgacaaacgtgctttattattaag tagacaagtcccgaagcgcagggctttggaatgtggcacgtccatcagtt tttaagaaattaagtgttttattaatatcattatttggactgtttgatat cttagcatcactctcttccaatcaaaaaagatttcgctcagatcccgtaa gttgtggaacaggatgcaggcaggtgtgccctgtcctcgccctgaaacct taaaaccgcccttgagaacttagaactgagcgggaccgtcagtgatttag cagagtactgggaaatcgaggaacacagctgtcccttctgcctcctcccc agttttttatttgcttcgttttaaaaatgagaataatacagttttttttt tttttctggtccctgagtaattcccattactaagtgaaaaacgaacgttg gaggagggacacatggtaacagagtcaagcgatcctgatagtgttattat ttcatgctagataccatgaaagggacgtaagcaggcaaagactggctgat cctga
quality values	Open. 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Hide. 62 47 31 41 62 62 62 62 62 47 56 51 56 56 38 38 28 56 62 62 62 44 44 62 62 62 62 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 47 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 62 62 62 62 62 52 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 54 46 54 58 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 58 58 58 58 52 58 58 58 58 54 37 58 54 49 58 58 58 58 58 58 58 58 58 58 49 46 54 58 58 58 54 58 58 58 58 58 58 51 58 58 58 46 50 46 58 58 58 49 58 58 58 58 58 43 50 49 46 50 51 53 58 58 58 58 47 53 58 38 35 58 48 58 51 58 58 51 58 58 52 58 50 49 53 35 49 58 50 58 49 58 41 51 58 42 38 58 52 58 49 50 50 50 50 52 50 44 33 58 52 52 52 58 58 58 58 35 37 49 35 58 41 43 50 50 35 58 41 58 51 23 58 58 39 50 42 50 53 53 53 53 49 47 42 51 51 53 53 54 54 54 40 51 35 50 54 21 54 49 49 50 47 49 51 34 54 32 41 39 52 40 52 52 41 39 54 53 54 49 54 49 29 30 26 42 42 41 47 54 44 54 51 54 45 38 24 32 54 44 35 53 53 53 37 22 31 34 33 54 29 38 37 54 44 40 54 54 54 37 54 38 52 52 32 36 26 52 33 32 52 52 32 20 47 41 33 34 53 53 53 51 47 53 47 40 36 35 29 37 45 45 32 32 47 40 32 33 24 36 51 30 25 31 30 30 28 51 45 34 27 22 25 33 40 31 31 29 31 42 22 45 31 35 28 32 31 31 48 31 24 31 31 32 14 40 30 46 46 26 24 43 31 31 32 28 33 26 34 31 32 48 38 28 24 31 28 24 46 12 31 34 34 38 43 46 22 19 47 30 31 29 29 31 21 32 18 31 33 29 32 31 32 34 38 31 32 32 48 33 25 25 28 24 29 21 22 31 26 19 14 16 46 32 17 23 22 33 48 48 46 46 36 32 17 47 30 19 25 31 33 31 21 21 43 44 28 22 41 41 44 32 28 31 30 15 26 27 18 10 13 19 30 31 32 31 21 36 44 38 41 38 38 41 36 41 41 38 48 10 26 12 19 27 15 27 39 25 9 20 22 16 23 18 19 12 18 16 43 22 14 19 22 18 34 15 29 6 15 22 14 19 47 37 39 21 20 9 16 17 26 32 20 19 16 23 25 22 10 25 10 34 21 6 10 16 13 13 28 18 15 16 21 16 13 10 10 27 10 22 24 7 5 6 6 7 27 7 10 23 27 28 8 15 19 7 8 19 26 7 6 3 10 9 13 22 20 8 15 24 26 16 29 10 7 8 17 9 11 14 24 15 11 17 28 13 16 28 13 15 16 16 21 7 3 4 14 10 22 5 1 3 21 7 3 2 7 10 13 15 4 11 21 21 16 6 8 5 5 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_79420759_79421896
seq2: B6Ng01-287O03.b_46_1112 (reverse)

seq1  GTCGACGTTTTATATCTTCAAAGTAAAATATATTGTCATAAAGGCCACTC  50
      |||||||||    ||||   |||||||  ||||||||   |||||   ||
seq2  GTCGACGTT---AATCT--CAAGTAAA--ATATTGTCCATAAGGC--ATC  41

seq1  GTCTGGATGCAGAAAGCGGGGTGGGGGGCAGCTTTTGAGAACATAGGGGA  100
      ||||||||||||  |||||||| || |||||| |||||| ||||| ||||
seq2  GTCTGGATGCAG--AGCGGGGT-GGAGGCAGC-TTTGAG-ACATA-GGGA  85

seq1  GAATTAATCTGGGTACAGAATCTGTAATATTAATGGATAGTCCTGGATTT  150
      ||    |||  | |||   ||| |||||||  || |||||||   |||  
seq2  GA---TATC-CGTTAC--GATC-GTAATAT--AT-GATAGTC--TGAT--  121

seq1  GAAATAAGTGAGACCTCTCCCTGCCCCCCCAGGGATAGAAATGGGAGACC  200
        ||| |||||||   ||| ||| |||||||||||||||||||||||| |
seq2  -GAATTAGTGAGA---CTCTCTG-CCCCCCAGGGATAGAAATGGGAGA-C  165

seq1  GAACCCACTCACAAGGTCACTGAAGAGCTAAAGCACTGACCATACTACTA  250
      ||  |||||||||| ||||||| |||||| ||||||||||||||||||||
seq2  GA--CCACTCACAA-GTCACTG-AGAGCT-AAGCACTGACCATACTACTA  210

seq1  GCTGCAGCCTCGTCTCCTAGGGAGTGAGGCTTTTAAAACAAAACTGTGTA  300
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  GCTGCAG-CTCGTCTCCTAGGGAGTGAGGC-TTTAAAACAAAACTGTGTA  258

seq1  TAATCTTTTTCTACAGGGAGCGTTAAGGGGTGGGAGGACATTTCGGACAT  350
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATC-TTTTCTACAGGGAGCGTTAAGGGGTGGGAGGACATTTCGGACAT  307

seq1  TTCTCTGGAATCGGAAACTGCCAACATCCACTAAAATCTAAATCTGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGAATCGGAAACTGCCAACATCCACTAAAATCTAAATCTGATTA  357

seq1  CATCTTTGTTCTTAAAGTCTTACCCAGACACCACTCACACTAATGCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGTTCTTAAAGTCTTACCCAGACACCACTCACACTAATGCAGGC  407

seq1  AACCCTAACTAAACAAAAAAGGTGTCAAAGGAAAGGGCCCAGTTCAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAACTAAACAAAAAAGGTGTCAAAGGAAAGGGCCCAGTTCAGAAG  457

seq1  GGGCTCAATTGAGTAGGGTATGGGTTGTGAATATGATCAAAATGGTGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAATTGAGTAGGGTATGGGTTGTGAATATGATCAAAATGGTGGTG  507

seq1  GTGGAGGGCAGGGAGCGAGGGAGGGAGGAGAGGGAGAGAGACAGAGACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGGCAGGGAGCGAGGGAGGGAGGAGAGGGAGAGAGACAGAGACTC  557

seq1  TTTAAATATATTTTGTGATTCTTTTACTTTAAGATTAAAAGCAGATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATATTTTGTGATTCTTTTACTTTAAGATTAAAAGCAGATTCAT  607

seq1  TCCAGTGTACCCTCTTCTTAAGCGTTCCCTTGCCTAACTGCTCTCTTCTT  700
      |||||||||||||||||||||||||||||||||||||||||||||     
seq2  TCCAGTGTACCCTCTTCTTAAGCGTTCCCTTGCCTAACTGCTCTC-----  652

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  750
                             |||||||||||||||||||||||||||
seq2  -----------------------TTCTTTCTTTCTTTCTTTCTTTCTTTC  679

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  729

seq1  TCTTTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTCTCTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTCTCTTTC  779

seq1  TCTCTTTCTCTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTTCTTCACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTTCTTCACAA  829

seq1  TAGATGTTTTGGCCCAGCCAGGAATATCTTCTCTCAGCAAGACTCGCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTTTGGCCCAGCCAGGAATATCTTCTCTCAGCAAGACTCGCAGG  879

seq1  ATCTCATCAGAGCAATTTGCATTCAGTTTGAACCAACTCTAGACTTCCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATCAGAGCAATTTGCATTCAGTTTGAACCAACTCTAGACTTCCAT  929

seq1  TTTCTGCTGTGGCCCTTAAGAAACAGTTACTTTTCATAGGTGTAACTTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTGTGGCCCTTAAGAAACAGTTACTTTTCATAGGTGTAACTTTC  979

seq1  TCAAAGAACTAAACTGCTGCTCTACAGAGATTTAAGTGTTTATGCGAAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACTAAACTGCTGCTCTACAGAGATTTAAGTGTTTATGCGAAAT  1029

seq1  ACATACTTTACACATAAATATTTCATTGAGCTGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||
seq2  ACATACTTTACACATAAATATTTCATTGAGCTGAATTC  1067

seq1: chr17_79315705_79316769
seq2: B6Ng01-287O03.g_65_1119

seq1  GAATTCTTTTACTTGGGTGTGACCGCGGGCAGGATAACCTTGCCTAAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACTTGGGTGTGACCGCGGGCAGGATAACCTTGCCTAAACG  50

seq1  ATACCAGCTTCCCACAGCTAGTTAGGTCAGGTTCCTCTGTGGGGCGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGCTTCCCACAGCTAGTTAGGTCAGGTTCCTCTGTGGGGCGTGGC  100

seq1  TAAAGCTGGGGGCGTGGCGCTAAGACCGTGCGCTTGCGCAGTCGGGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGGGGGCGTGGCGCTAAGACCGTGCGCTTGCGCAGTCGGGTTGC  150

seq1  GGAGGCCTCAGGTAAGGACCGGGCAGTGTTTCTTGTCCTCTGTTCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTCAGGTAAGGACCGGGCAGTGTTTCTTGTCCTCTGTTCCCCAA  200

seq1  TGTGTGGCGCGTGGGGTCTGTGACATTCTTGGGTGTGGGGAACACTCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGCGCGTGGGGTCTGTGACATTCTTGGGTGTGGGGAACACTCGAG  250

seq1  CGAGCCCGCCCCGCAGGCGCAGGAGCGCGAGCGTTTCCGGGTCGCCGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCGCCCCGCAGGCGCAGGAGCGCGAGCGTTTCCGGGTCGCCGAGC  300

seq1  CGCGACGCATGCTGGGACCAGGACCCCGGGTAAGGCTGGGTGCTCGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGACGCATGCTGGGACCAGGACCCCGGGTAAGGCTGGGTGCTCGCTGT  350

seq1  TGGATCCTTGCAGGGCAGCAGCCCCCGGTCGCAGCGCCGCCTTTCCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTTGCAGGGCAGCAGCCCCCGGTCGCAGCGCCGCCTTTCCTCCC  400

seq1  TCGGGCCTACACTGGAGCACACGCAGGGTTGCTTCTCCTGCGCTGCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCCTACACTGGAGCACACGCAGGGTTGCTTCTCCTGCGCTGCAGCC  450

seq1  CCAGGCGCTCCTGTGCAACAAGGCTCCGTGGTCTTTGGTCTCCCTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCGCTCCTGTGCAACAAGGCTCCGTGGTCTTTGGTCTCCCTGAGCC  500

seq1  ATCTTGTCTGGACAGTGTGTCTCTGGTGACAAACGTGCTTTATTATTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCTGGACAGTGTGTCTCTGGTGACAAACGTGCTTTATTATTAAG  550

seq1  TAGACAAGTCCCGAAGCGCAGGGCTTTGGAATGTGGCACGTCCATCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAGTCCCGAAGCGCAGGGCTTTGGAATGTGGCACGTCCATCAGTT  600

seq1  TTTAAGAAATTAAGTGTTTTATTAATATCATTATTTGGACTGTTTGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAATTAAGTGTTTTATTAATATCATTATTTGGACTGTTTGATAT  650

seq1  CTTAGCATCACTCTCTTCCAATCAAAAAAGATTTCGCTCAGATCCCGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATCACTCTCTTCCAATCAAAAAAGATTTCGCTCAGATCCCGTAA  700

seq1  GTTGTGGAACAGGATGCAGGCAGGTGTGCCCTGTCCTCGCCCTGAAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGAACAGGATGCAGGCAGGTGTGCCCTGTCCTCGCCCTGAAACCT  750

seq1  TAAAACCGCCCTTGAGAACTTAGAACTGAGCGGGACCGTCAGTGATTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCGCCCTTGAGAACTTAGAACTGAGCGGGACCGTCAGTGATTTAG  800

seq1  CAGAGTACTGGGAAATCGAGGAACACAGCTGTCCCTTCTGCCTCCTCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACTGGGAAATCGAGGAACACAGCTGTCCCTTCTGCCTCCTCCCC  850

seq1  AGTTTTTTATTTGCTTCGTTTTAAAAATGAGAATAATACAG--TTTTTTT  898
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  AGTTTTTTATTTGCTTCGTTTTAAAAATGAGAATAATACAGTTTTTTTTT  900

seq1  TTTTTCTGGTCCCTGAGTAATTCCCATTACTAAAGTGAAAAACGAACGTT  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTTCTGGTCCCTGAGTAATTCCCATTACT-AAGTGAAAAACGAACGTT  949

seq1  GGAGGAGGGACACATGGTAACAGAGTCCAAGGCGAATCCTGATAGTGTTT  998
      |||||||||||||||||||||||||||  | ||| |||||||||||||| 
seq2  GGAGGAGGGACACATGGTAACAGAGTC--AAGCG-ATCCTGATAGTGTT-  995

seq1  AATTATTTTCATGCTTAGATACCATGAAAGGGACGTAAAAGCAGGGGAAA  1048
       |||| |||||||| |||||||||||||||||||||  |||||  || ||
seq2  -ATTA-TTTCATGC-TAGATACCATGAAAGGGACGT--AAGCA--GGCAA  1038

seq1  GGACTGGCTGATCCTGA  1065
       ||||||||||||||||
seq2  AGACTGGCTGATCCTGA  1055

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information