BAC Information

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BAC

Clone NameB6Ng01-288J04
Chromosome17 (Build37)
Map Location 73,300,214 - 73,301,173
singlet/doubletsinglet
Overlap genenone
Upstream geneAlk, Ypel5, Lbh
Downstream geneLycat, LOC668709, Capn13, LOC100043666, Galnt14, Ehd3, LOC240160, Xdh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288J04.bB6Ng01-288J04.g
ACCGA086201GA086202
length962311
definitionB6Ng01-288J04.b B6Ng01-288J04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagctctaatctcagcactgccttaccaactgcctgtgtgtcc
cttaaaccaggtcagctggctaaacagagctaagctctcagtcctatcta
aaccttcagtctccttgcttgcaaaggagcctggtagttttctccaatgg
tgacatcttagcgcttccccgcccactctgcccctttcctgattccttgt
gctgaggaaatggcagcttataccagctgtgctcctgaaggtcactgagg
gccaggctccttcccatatgaaggccattctcagatagggtgacaagaat
cagctgagcagtgcctccctcggcagtgccggtggctgagaaaggatgct
gaggagccttgggtatagcatgttttatctgtccctcgtggtggtttcat
ggtgaatggatggggactgtgatagtcagccaggaaccgagagctttatg
taaattatacctcaattataaagagtgtgtgaagctcaacaagaccccag
ggaaagatgagtctttggtgcagttgcaggggacttaggcaagcttgagt
gttaaagcaaaggttgggaggagggaatgggagagtcagagagagagacc
cagacaagtgtggacagagttgaagagattgctggagaagctaaaatttc
cctccagttctagccagccaaatgagtcctgagtgaaagatgggtttggc
ttccaagtagagtgaaaagccatactggcctgctctgggatagatatcct
cacttcattagtgaaagttctgtgtctcagggagcctctaagatcaagat
aaatgggctaccagtccatcaccctattcccaagtctggggctgtgggtg
gcacttagataggctgacttacctaccccacaagggaacccacaacacgc
caaagttattcgctgcaccaagttccaacttggtgacaagacccccaact
tccatcacaggt

tagccaaatgccagtgcctggcaaatacagaagtggatgctcacagtcat
ctatcggatggaacacagggcccccaatggaggacctagagaaagtaccc
aaggagctgaaggggtctgcaaccctataggtggaacaacattatgaact
aaccagtacccccagagctcttatctctagctgcatatgtagcagaggat
ggcctagttagccatcattgggaagagaggccccttggtcttgcaaactt
tatctgccccaatacaggggaacaccagggccaagaagtgggagtggtgg
gtaggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_73300214_73301173
seq2: B6Ng01-288J04.b_43_1004 (reverse)

seq1  ACCTGTGATGGA--GTGGGGGTCTTGTCACCAAGTTGGACTTTGGTGCAG  48
      ||||||||||||   ||||||||||||||||||||||||  |||||||||
seq2  ACCTGTGATGGAAGTTGGGGGTCTTGTCACCAAGTTGGAACTTGGTGCAG  50

seq1  CGAAT-ACTTTGGCGTGTTGTGGGTTCCCTTTGTGGGGTAGGTAAGTCAG  97
      ||||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGAATAACTTTGGCGTGTTGTGGGTTCCC-TTGTGGGGTAGGTAAGTCAG  99

seq1  CCTATCTAAGTGCCACCCACAGCCCCAGACTTGGGAATAGGGTGATGGAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTAAGTGCCACCCACAGCCCCAGACTTGGGAATAGGGTGATGGAC  149

seq1  TGGTAGCCCATTTATCTTGATCTTAGAGGCTCCCTGAGACACAGAACTTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCCCATTTATCTTGATCTTAGAGGCTCCCTGAGACACAGAACTTT  199

seq1  CACTAATGAAGTGAGGATATCTATCCCAGAGCAGGCCAGTATGGCTTTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGAAGTGAGGATATCTATCCCAGAGCAGGCCAGTATGGCTTTTC  249

seq1  ACTCTACTTGGAAGCCAAACCCATCTTTCACTCAGGACTCATTTGGCTGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACTTGGAAGCCAAACCCATCTTTCACTCAGGACTCATTTGGCTGG  299

seq1  CTAGAACTGGAGGGAAATTTTAGCTTCTCCAGCAATCTCTTCAACTCTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACTGGAGGGAAATTTTAGCTTCTCCAGCAATCTCTTCAACTCTGT  349

seq1  CCACACTTGTCTGGGTCTCTCTCTCTGACTCTCCCATTCCCTCCTCCCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTGTCTGGGTCTCTCTCTCTGACTCTCCCATTCCCTCCTCCCAA  399

seq1  CCTTTGCTTTAACACTCAAGCTTGCCTAAGTCCCCTGCAACTGCACCAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCTTTAACACTCAAGCTTGCCTAAGTCCCCTGCAACTGCACCAAA  449

seq1  GACTCATCTTTCCCTGGGGTCTTGTTGAGCTTCACACACTCTTTATAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATCTTTCCCTGGGGTCTTGTTGAGCTTCACACACTCTTTATAATT  499

seq1  GAGGTATAATTTACATAAAGCTCTCGGTTCCTGGCTGACTATCACAGTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATAATTTACATAAAGCTCTCGGTTCCTGGCTGACTATCACAGTCC  549

seq1  CCATCCATTCACCATGAAACCACCACGAGGGACAGATAAAACATGCTATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATTCACCATGAAACCACCACGAGGGACAGATAAAACATGCTATA  599

seq1  CCCAAGGCTCCTCAGCATCCTTTCTCAGCCACCGGCACTGCCGAGGGAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCTCCTCAGCATCCTTTCTCAGCCACCGGCACTGCCGAGGGAGG  649

seq1  CACTGCTCAGCTGATTCTTGTCACCCTATCTGAGAATGGCCTTCATATGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCAGCTGATTCTTGTCACCCTATCTGAGAATGGCCTTCATATGG  699

seq1  GAAGGAGCCTGGCCCTCAGTGACCTTCAGGAGCACAGCTGGTATAAGCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCCTGGCCCTCAGTGACCTTCAGGAGCACAGCTGGTATAAGCTG  749

seq1  CCATTTCCTCAGCACAAGGAATCAGGAAAGGGGCAGAGTGGGCGGGGAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCTCAGCACAAGGAATCAGGAAAGGGGCAGAGTGGGCGGGGAAG  799

seq1  CGCTAAGATGTCACCATTGGAGAAAACTACCAGGCTCCTTTGCAAGCAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAAGATGTCACCATTGGAGAAAACTACCAGGCTCCTTTGCAAGCAAG  849

seq1  GAGACTGAAGGTTTAGATAGGACTGAGAGCTTAGCTCTGTTTAGCCAGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGAAGGTTTAGATAGGACTGAGAGCTTAGCTCTGTTTAGCCAGCT  899

seq1  GACCTGGTTTAAGGGACACACAGGCAGTTGGTAAGGCAGTGCTGAGATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGTTTAAGGGACACACAGGCAGTTGGTAAGGCAGTGCTGAGATTA  949

seq1  GAGCTCAGAATTC  960
      |||||||||||||
seq2  GAGCTCAGAATTC  962


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