BAC Information

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BAC

Clone NameB6Ng01-288O20
Chromosome17 (Build37)
Map Location 60,097,737 - 60,098,636
singlet/doubletsinglet
Overlap genenone
Upstream gene2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288O20.bB6Ng01-288O20.g
ACCGA086465GA086466
length907961
definitionB6Ng01-288O20.b B6Ng01-288O20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgagcaactagtgtaaccctacagagaatactaaatatttcag
tctaaatagaaaaaactgcactcagagattacaggaaaggaagtaaatga
tggtaaacaacggaacagcagggagccatagatgtctcttaataacaact
gtaaatgccgatggtctcagtcacccctaaaaagacatttagtagtgatt
tggattacaggacagaatgtttctttttgttgcatccaaaaacaacagag
aacacaaacagagacgtagactatgtaaaagtatattagtcagagagaca
gaattcatagaacaaatctcttcctcctctttctgctttctctatctatc
tatctatctatctatctatctatctatatccatctccttgaggaatgtat
ttttttgtttacctttattattaattgaagtggaaacttaagagttcttt
ggaaagttaattggatggtgttttgctgggactaataggtgaaagcagac
aggggtgtaaaatgctaaggccaattcttcaaggaatgtttcactgaaac
acttcatgaaagaatattctgctaaagcaagtacatgaaagaacatgtga
tgaaggactctttcctaatgacacttatgtattggtcctccttatattgt
gtagttgaaatgcacttgctgggaccacatagaaagaaacacaccaaaaa
acttctggaggtgtgaagtagtttgttgggacaacaagggctgaatgcac
gaatatgctgaaaagacatgtgaaaggacatgtgatgtttggagggtata
aataggacttcatggagtagcaaagacagaactctgcttgctggtacact
tagcttgcaacacttgtgggtctcactcatatctttgctgatcttcactt
ccttgaa
gaattcctgatctctccaatacttttaacatgaaggggtgttgtattttg
tcaaatcctttttctgtatctaagaagatgatcatgtgatttttttcttt
gggtttgtttatatagtggattactttaatggatttccatatattaaacc
aaacttgcatccctatttcacaattgagaaaactccactggctgagaagc
acctaaagaaatgttcaaagtccttagttgtggggaaccgccctcacatt
cgccattacaagatggcgctgacatcctgtgttctaagtggtaaacaaat
aatctgcgcatgtgccaagggtagttctccactccatgtgctctgccttc
cctgtgatgacaactcggccgatgggctgcagccaatcagggagcgacac
ttcctaggcggaggataattctccttaaaaagggatggggtttcgccatt
ctctctcttgctcttgctcttgctcctgaagatgtaagcaataaagcttt
tgccgcagaagattccggtttgttgtgtctttcctggccggtcgcgcgaa
tgcgtgtaagacttagttatcagagaaatgcaaataaaaatgaccctgag
agtcccccttacaccaattagaacggataagatcaaaacctcaggtgaca
gcacatgttggagacgatgtggagaaaaaggaacactcctcaattgctgg
tgggattgcaaactggtacaactactctggacatcaatctgacggtccct
cagaaaattggaaatagatctacctgaagagccagctataccactcttgg
gaatatacccaaaagatgccccaccatgccacaggggcatgtgttccact
gtgttcatagcagccttatttatgatagccagaaagctggaacaacctag
atgtcccacgacagaagaatgggaaacagaaaatgtgggttcatttacac
atggaatacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60097737_60098636
seq2: B6Ng01-288O20.b_48_948 (reverse)

seq1  GAAGTGAAGATCAGCAAAGATATGAGTGAGACCCACAAGTGTTGCAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAAGATCAGCAAAGATATGAGTGAGACCCACAAGTGTTGCAAGCT  50

seq1  AAGTGTACCAGCAAGCAGAGTTCTGTCTTTGCTACTCCATGAAGTCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTACCAGCAAGCAGAGTTCTGTCTTTGCTACTCCATGAAGTCCTAT  100

seq1  TTATACCCTCCAAACATCACATGTCC-TTCACATGTCTTTTCAGCATATT  149
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTATACCCTCCAAACATCACATGTCCTTTCACATGTCTTTTCAGCATATT  150

seq1  CGTGCATTCAGCCCTTGTTGTCCCAACAAACTACTTCACACCTCCAGAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCATTCAGCCCTTGTTGTCCCAACAAACTACTTCACACCTCCAGAAG  200

seq1  TTTTTTGGTGTGTTTCTTTCTATGTGGTCCCAGCAAGTGCATTTCAACTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTGTGTTTCTTTCTATGTGGTCCCAGCAAGTGCATTTCAACTA  250

seq1  CACAATATAAGGAGGACCAATACATAAGTGTCATTAGGAAAGAGTCCTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATATAAGGAGGACCAATACATAAGTGTCATTAGGAAAGAGTCCTTC  300

seq1  ATCACATGTTCTTTCATGTACTTGCTTTAGCAGAATATTCTTTCATGAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGTTCTTTCATGTACTTGCTTTAGCAGAATATTCTTTCATGAAG  350

seq1  TGTTTCAGTGAAACATTCCTTGAAGAATTGGCCTTAGCATTTTACACCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGTGAAACATTCCTTGAAGAATTGGCCTTAGCATTTTACACCCC  400

seq1  TGTCTGCTTTCACCTATTAGTCCCAGCAAAACACCATCCAATTAACTTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTTCACCTATTAGTCCCAGCAAAACACCATCCAATTAACTTTC  450

seq1  CAAAGAACTCTTAAGTTTCCACTTCAATTAATAATAAAGGTAAACAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAACTCTTAAGTTTCCACTTCAATTAATAATAAAGGTAAACAAAAA  500

seq1  AATACATTCCTCAAGGAGATGGATATAGATAGATAGATAGATAGATAGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTCCTCAAGGAGATGGATATAGATAGATAGATAGATAGATAGAT  550

seq1  AGATAGATAGAGAAAGCAGAAAGAGGAGGAAGAGATTTGTTCTATGAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGAGAAAGCAGAAAGAGGAGGAAGAGATTTGTTCTATGAATT  600

seq1  CTGTCTCTCTGACTAATATACTTTTACATAGTCTACGTCTCTGTTTGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTGACTAATATACTTTTACATAGTCTACGTCTCTGTTTGTGT  650

seq1  TCTCTGTTGTTTTTGGATGCAACAAAAAGAAACATTCTGTCCTGTAATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTGTTTTTGGATGCAACAAAAAGAAACATTCTGTCCTGTAATCC  700

seq1  AAATCACTACTAAATGTCTTTTTAGGGGTGACTGAGACCATCGGCATTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTACTAAATGTCTTTTTAGGGGTGACTGAGACCATCGGCATTTA  750

seq1  CAGTTGTTATTAAGAGACATCTATGGCTCCCTGCTGTTCCGTTGTTTACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTTATTAAGAGACATCTATGGCTCCCTGCTGTTCCGTTGTTTACC  800

seq1  ATCATTTACTTCCTTTCCTGTAATCTCTGAGTGCAGTTTTTTCTATTTAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTACTTCCTTTCCTGTAATCTCTGAGTGCAGTTTTTTCTATTTAG  850

seq1  ACTGAAATATTTAGTATTCTCTGTAGGGTTACACTAGTTGCTCATGAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATATTTAGTATTCTCTGTAGGGTTACACTAGTTGCTCATGAATT  900

seq1  C  900
      |
seq2  C  901