BAC Information

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BAC

Clone NameB6Ng01-290G22
Chromosome17 (Build37)
Map Location 32,386,107 - 32,572,756
singlet/doubletdoublet
Overlap geneBrd4, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2
Upstream geneLOC100042906, Tsga2, EG667056, Slc37a1, Pde9a, Wdr4, 1500032D16Rik, Pknox1, Cbs, LOC623242, U2af1, Cryaa, Snf1lk, Hsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, LOC100043434
Downstream gene4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290G22.bB6Ng01-290G22.g
ACCGA087576GA087577
length1,1191,170
definitionB6Ng01-290G22.b B6Ng01-290G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,571,647 - 32,572,756)(32,386,107 - 32,387,261)
sequence
gaattcaatgtgtaactgaatctggcctgaacttctgatcctcctgtctc
caactctccagtgtcaatgtgcctgtctcctgtgtccctcttttgaggga
gtgacaccaagttagcctgtgggcagtgggggttatttgcccaggccctc
ccctccaggcccatttactccactcaacctgggccctagcactccctcac
ggactgagctcacacatctacataaagtcctgcatcttcatttacaaaac
ttcttcccagttccaggatgagatgcctggatgattaaatctctcccatc
ccttccagaaactcagctcaggacacctattgcctattggagactcctgg
aggcagagagtcagcagctccaacagcaaacagcttttatttcctttggt
actctggactcctctaatccctgtgctggcctaaaccagcttcaacagct
tggcagctgctctagatgggcttcagtcccggccctgaggcccggaagcc
cacaggaatctaggggcgctccagatgaggaaataatggagtcctgtggg
cccggatttgcctcagatgtgggagccctgacatcaggttaatgagatgg
attacgcccattggctagactctgccatagctggggcctctgagacagat
gtgtaggacagagaaccctgagcacaccctcccacgcactcccagggccc
tgttcctcaatcccagcccacacagtgttgcatctctgtggcctgattcc
accttcacagtgtctatgggaggggctctccttccattctcaaggtggac
ggaatgagggcaagtcatgaaactacttactagaagtagaggcagaccag
gaatttgttaaatgttttaaatgagtttttactgtttaagaatttcatac
atgcatgcaatgtgttttaatcaaatctctctctcccatcacctccaatt
ccctgcccttatctcctactactcaactccctcccaatttccatgtaaat
tttttttttaacccagtgagttaacactaatgctggccttgttatctcat
gatgtaggatcatctactgacgtggagcagtcttctcagattgccacaac
cctttaaaggaaactgact
gaattcaggtgccgtcactttcttccatctcaagagaggtcatggcattt
atccactgtcatgacacctggggtagggtacaacttcatacaaatggaat
tttaaggaagccagtcctttacaatctggcagtcattctcacagccatat
taatgacgtatttttatgtatattggtgttttacctgtgtatatgtctat
gtgaaggtacttgatctccccaaactggagttacagttttgagctgtcat
gtggggtgtcaggaactgcacccaggtcctctggaagtacagcctgtgct
cttaaccaatgagctatctctctagccttagtgaaagtcatttccaagtc
tattttcagctagaacctaataaagatttctaaactatagacaccctgtc
ccacaaatataagattaaggccagtggttctcatccttaataatgctgtg
gccttttaatacagtctttcatgttgtggtgacccctaattattgttact
agttcctaactggaattttactaattttatgaattatgtataaatttctg
atagatatgagacctgtggaagggtaattctctccccactaggggtcttg
aactacaggtctcacaaacaaaacaagtaacaaaacagatcaagaaagga
taaaaattcagctagatcacctaggcagtactcaaggaaacaaatatcta
gaaacaaaatcaagagtttcatttcagctgggcacggtggcgcacgcctt
taattccagcactcaggaggcagaggcaggcggatttctgtgttccaggc
cagcctggtctacaaagtgagttccaggacagcgagggctacacagagaa
accctgtctcgaaaacccaaaaagagtttcatttcacaaccatctggggc
ttagatgttatctataccctgaaagatctctttaagaagccagttgttat
ttaaactatttagtgtactactgagaaaaatagcttgctcaaggaaggca
tatgggcaattaaaacatttttcctttgggacttgaatggtggaatctta
cccaggtcatatttactacattgaacacctaaggaacctggagacccagc
cagcttgtccactgcaattgcccaacaactctcaaggaggctactgcagg
ttatctgctcaaaggtaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_32571647_32572756
seq2: B6Ng01-290G22.b_46_1164 (reverse)

seq1  AGTCAGTTTCCTTTAA--GGTTGTGGC-ATCTGAG-AGACTGCT-CACGT  45
      ||||||||||||||||  ||||||||| ||||||| |||||||| |||||
seq2  AGTCAGTTTCCTTTAAAGGGTTGTGGCAATCTGAGAAGACTGCTCCACGT  50

seq1  TCCAGTAGATGATCCTACATCCATGAGAT-ACA--GGCAGCATTTAGTGT  92
        |||||||||||||||||| |||||||| |||  | ||||| |||||||
seq2  --CAGTAGATGATCCTACAT-CATGAGATAACAAGGCCAGCA-TTAGTGT  96

seq1  TAACTCACTGGGTT--AAAAAAAATTTACAT-GAAATTGGGAGGGAGTTG  139
      ||||||||||||||  ||||||||||||||| ||||||||||||||||||
seq2  TAACTCACTGGGTTAAAAAAAAAATTTACATGGAAATTGGGAGGGAGTTG  146

seq1  AGTAGTAGGAGATAA-GGCA-GGAATTGGAGGTGATGGGAGAGAGAGATT  187
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  AGTAGTAGGAGATAAGGGCAGGGAATTGGAGGTGATGGGAGAGAGAGATT  196

seq1  TGATTAAAACACATTGCATGCATGTATGAAATTCTTAAACAGTAAAAACT  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAACACATTGCATGCATGTATGAAATTCTTAAACAGTAAAAACT  246

seq1  CATTTAAAACATTTAACAAATTCCTGGTCTGCCTCTACTTCTAGTAAGTA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAACATTTAACAAATTCCTGGTCTGCCTCTACTTCTAGTAAGTA  296

seq1  GTTTCATGACTTGCCCTCATTCCGTCCACCTTGAGAATGGAAGGAGAGCC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGACTTGCCCTCATTCCGTCCACCTTGAGAATGGAAGGAGAGCC  346

seq1  CCTCCCATAGACACTGTGAAGGTGGAATCAGGCCACAGAGATGCAACACT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCATAGACACTGTGAAGGTGGAATCAGGCCACAGAGATGCAACACT  396

seq1  GTGTGGGCTGGGATTGAGGAACAGGGCCCTGGGAGTGCGTGGGAGGGTGT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGCTGGGATTGAGGAACAGGGCCCTGGGAGTGCGTGGGAGGGTGT  446

seq1  GCTCAGGGTTCTCTGTCCTACACATCTGTCTCAGAGGCCCCAGCTATGGC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGTTCTCTGTCCTACACATCTGTCTCAGAGGCCCCAGCTATGGC  496

seq1  AGAGTCTAGCCAATGGGCGTAATCCATCTCATTAACCTGATGTCAGGGCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTAGCCAATGGGCGTAATCCATCTCATTAACCTGATGTCAGGGCT  546

seq1  CCCACATCTGAGGCAAATCCGGGCCCACAGGACTCCATTATTTCCTCATC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATCTGAGGCAAATCCGGGCCCACAGGACTCCATTATTTCCTCATC  596

seq1  TGGAGCGCCCCTAGATTCCTGTGGGCTTCCGGGCCTCAGGGCCGGGACTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCGCCCCTAGATTCCTGTGGGCTTCCGGGCCTCAGGGCCGGGACTG  646

seq1  AAGCCCATCTAGAGCAGCTGCCAAGCTGTTGAAGCTGGTTTAGGCCAGCA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATCTAGAGCAGCTGCCAAGCTGTTGAAGCTGGTTTAGGCCAGCA  696

seq1  CAGGGATTAGAGGAGTCCAGAGTACCAAAGGAAATAAAAGCTGTTTGCTG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTAGAGGAGTCCAGAGTACCAAAGGAAATAAAAGCTGTTTGCTG  746

seq1  TTGGAGCTGCTGACTCTCTGCCTCCAGGAGTCTCCAATAGGCAATAGGTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGCTGACTCTCTGCCTCCAGGAGTCTCCAATAGGCAATAGGTG  796

seq1  TCCTGAGCTGAGTTTCTGGAAGGGATGGGAGAGATTTAATCATCCAGGCA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCTGAGTTTCTGGAAGGGATGGGAGAGATTTAATCATCCAGGCA  846

seq1  TCTCATCCTGGAACTGGGAAGAAGTTTTGTAAATGAAGATGCAGGACTTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCCTGGAACTGGGAAGAAGTTTTGTAAATGAAGATGCAGGACTTT  896

seq1  ATGTAGATGTGTGAGCTCAGTCCGTGAGGGAGTGCTAGGGCCCAGGTTGA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATGTGTGAGCTCAGTCCGTGAGGGAGTGCTAGGGCCCAGGTTGA  946

seq1  GTGGAGTAAATGGGCCTGGAGGGGAGGGCCTGGGCAAATAACCCCCACTG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTAAATGGGCCTGGAGGGGAGGGCCTGGGCAAATAACCCCCACTG  996

seq1  CCCACAGGCTAACTTGGTGTCACTCCCTCAAAAGAGGGACACAGGAGACA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGGCTAACTTGGTGTCACTCCCTCAAAAGAGGGACACAGGAGACA  1046

seq1  GGCACATTGACACTGGAGAGTTGGAGACAGGAGGATCAGAAGTTCAGGCC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATTGACACTGGAGAGTTGGAGACAGGAGGATCAGAAGTTCAGGCC  1096

seq1  AGATTCAGTTACACATTGAATTC  1110
      |||||||||||||||||||||||
seq2  AGATTCAGTTACACATTGAATTC  1119

seq1: chr17_32386107_32387261
seq2: B6Ng01-290G22.g_64_1233

seq1  GAATTCAGGTGCCGTCACTTTCTTCCATCTCAAGAGAGGTCATGGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGCCGTCACTTTCTTCCATCTCAAGAGAGGTCATGGCATTT  50

seq1  ATCCACTGTCATGACACCTGGGGTAGGGTACAACTTCATACAAATGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGTCATGACACCTGGGGTAGGGTACAACTTCATACAAATGGAAT  100

seq1  TTTAAGGAAGCCAGTCCTTTACAATCTGGCAGTCATTCTCACAGCCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGAAGCCAGTCCTTTACAATCTGGCAGTCATTCTCACAGCCATAT  150

seq1  TAATGACGTATTTTTATGTATATTGGTGTTTTACCTGTGTATATGTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACGTATTTTTATGTATATTGGTGTTTTACCTGTGTATATGTCTAT  200

seq1  GTGAAGGTACTTGATCTCCCCAAACTGGAGTTACAGTTTTGAGCTGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGTACTTGATCTCCCCAAACTGGAGTTACAGTTTTGAGCTGTCAT  250

seq1  GTGGGGTGTCAGGAACTGCACCCAGGTCCTCTGGAAGTACAGCCTGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGTCAGGAACTGCACCCAGGTCCTCTGGAAGTACAGCCTGTGCT  300

seq1  CTTAACCAATGAGCTATCTCTCTAGCCTTAGTGAAAGTCATTTCCAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCAATGAGCTATCTCTCTAGCCTTAGTGAAAGTCATTTCCAAGTC  350

seq1  TATTTTCAGCTAGAACCTAATAAAGATTTCTAAACTATAGACACCCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAGCTAGAACCTAATAAAGATTTCTAAACTATAGACACCCTGTC  400

seq1  CCACAAATATAAGATTAAGGCCAGTGGTTCTCATCCTTAATAATGCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATATAAGATTAAGGCCAGTGGTTCTCATCCTTAATAATGCTGTG  450

seq1  GCCTTTTAATACAGTCTTTCATGTTGTGGTGACCCCTAATTATTGTTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTAATACAGTCTTTCATGTTGTGGTGACCCCTAATTATTGTTACT  500

seq1  AGTTCCTAACTGGAATTTTACTAATTTTATGAATTATGTATAAATTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTAACTGGAATTTTACTAATTTTATGAATTATGTATAAATTTCTG  550

seq1  ATAGATATGAGACCTGTGGAAGGGTAATTCTCTCCCCACTAGGGGTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATGAGACCTGTGGAAGGGTAATTCTCTCCCCACTAGGGGTCTTG  600

seq1  AACTACAGGTCTCACAAACAAAACAAGTAACAAAACAGATCAAGAAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGGTCTCACAAACAAAACAAGTAACAAAACAGATCAAGAAAGGA  650

seq1  TAAAAATTCAGCTAGATCACCTAGGCAGTACTCAAGGAAACAAATATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTCAGCTAGATCACCTAGGCAGTACTCAAGGAAACAAATATCTA  700

seq1  GAAACAAAATCAAGAGTTTCATTTCAGCTGGGCACGGTGGCGCACGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAATCAAGAGTTTCATTTCAGCTGGGCACGGTGGCGCACGCCTT  750

seq1  TAATTCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGTGTTCCAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGTGTTCCAGGC  800

seq1  CAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCGAGGGCTACACAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCGAGGGCTACACAGAGAA  850

seq1  ACCCTGTCTCGAAAACCC-AAAAGAGTTTCATTTCACAACCATCTGGGGC  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCGAAAACCCAAAAAGAGTTTCATTTCACAACCATCTGGGGC  900

seq1  TTAGATGTTATCTATACCCTGAAAGATCTCTTTAAGAAGCCAGTTGTTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGTTATCTATACCCTGAAAGATCTCTTTAAGAAGCCAGTTGTTAT  950

seq1  TTAAACTATTTAGTGTACTACTGAG-AAAATAGCTTGCTCAAGGAAGGCA  998
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAAACTATTTAGTGTACTACTGAGAAAAATAGCTTGCTCAAGGAAGGCA  1000

seq1  TATGGGCAAATAAAAACATTTTTCCTTT-GGACTTGAAATGGTGG-ATCT  1046
      ||||||| ||| |||||||||||||||| ||||||| |||||||| ||||
seq2  TATGGGC-AATTAAAACATTTTTCCTTTGGGACTTG-AATGGTGGAATCT  1048

seq1  AACCAAGGTCATA-TTACTACA-TGAACACCTAA-GAACCT-GAGA-CCA  1091
       ||| |||||||| |||||||| ||||||||||| |||||| |||| |||
seq2  TACCCAGGTCATATTTACTACATTGAACACCTAAGGAACCTGGAGACCCA  1098

seq1  G-CAGC-TGTCCACTGCCAATG-CCAACAA--CTCAAGGAGGCTACTGGC  1136
      | |||| |||||||||| | || |||||||  ||||||||||||||| ||
seq2  GCCAGCTTGTCCACTGCAATTGCCCAACAACTCTCAAGGAGGCTACT-GC  1147

seq1  AG--TA-CTGCTCAAA-GTAATG  1155
      ||  || ||||||||| ||||||
seq2  AGGTTATCTGCTCAAAGGTAATG  1170