BAC Information

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BAC

Clone NameB6Ng01-291B01
Chromosome17 (Build37)
Map Location 77,398,591 - 77,509,309
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043886, EG624348
Downstream geneLOC545234, LOC100043887, LOC668795
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291B01.bB6Ng01-291B01.g
ACCGA088051GA088052
length1,0321,026
definitionB6Ng01-291B01.b B6Ng01-291B01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,398,591 - 77,399,406)(77,508,681 - 77,509,309)
sequence
gaattcactcactctagtaagtttgtaatgaacgtcttacatgtaggaac
attttaaattaaaagagtttaatatatcctcttcaatctctatgtttctc
attttatttgttcttgcccctggctagggactcacatattaaagttacct
gagcaaacactgttgtcctttcccagtcctatgatcatttactcttgtgt
aggcatgctggctataaatgttaatggcgataccttatcagtcttgactt
ctttttatgagttggtttaaaaatattgctcatattattctttgggtagt
tgagtcatctgggagaaatgacctcaagtaacttttcacattctaagtat
ctatttttatgttttctgtgcagtgtgtccctccacattatttctctatt
tctatttaattcttctctttgtattattatttttaaatgttccttatata
ttctatataaaacctctttttgagaacagtattgatgaatatttatctca
attgttgtatttcattgcacaaactatattttgaaaattatttttatatt
tgtctaaattgatgtgttaatgaaacttagtgtttttcctcctatcaaaa
ctacctggacattttaatttaaaggcatcacaatttttgatataaaatta
attaacttcaatatggttaacccattgcatcacacttaacaatatacgta
ttaacttctaactcattgttttgaattactgtttttaatggagagtttta
gaaaataaaatgttgagttgtttcctgttctttctccatcaggatactaa
atgggttcaagcaatatttgttggaaagactttgaaaaaatctatttatg
tatgttggataattaattgtaaatgtgttctttcttgacttcattttctt
ccagttacctgctttacaattttcttatcctgattagaatgccttgatta
ctgcacttttagaaaattcccttaatttattcttcatttagtagaatctt
tttttcagatcttgggttaatacatagatttt

gaattcctttctcaagacgtttccatgtctactcattgctggcagaacta
aattttaagtactttgaatgtattcaataccttgcaatatctatgatacc
ctgcaataatatccaataccttgcaatatctattataccctgcaataaaa
cttctggacttcagacatctattaaaaaacaataagaaaacaaaatagaa
attttttctgcattattcaaaatattccggtatgtactgaatttttattt
gactttcattgaaatagaattacatccccaccatcttcctccagtcccta
cctgttgcccttcctcaaagaactcctgtgtcactatcaagtatataatc
tctttttatttggttattgttgctacataaatataaatgtctatatactt
gtaagtaaaagaatgaatcaacagaaattgctaagtctatttttaatgac
agtgtgcataagatttcagggctgaccactctgcactgggcaacctgtaa
ggtggctcaattttgggataggttcattctccttctccccactacatgca
ccatgcattgcctctaattctttatctagagtcgggacctgaaaaatgtt
ccctttaatgctaacttgtccattgatattgtcatagtgcttttcatgtt
catgtagccatttgtaggaaagcttgttttatagcgacttcctggtagtc
aggctctgacagtttccttactataccctcttccacaatgtcccataatc
cacagatgcagaagttattatgtagatgtagccattgaagctgggctctc
aagatcacttgatttctgcatgagtccttttgcatttttctgatgtggtc
tgcctctacttgaggtaaacagaagattctttgatgaggtagatacattt
atattctgaggtaggcacttgttggctgagacagaatgtggcatttgtct
ttctgagtgtaggctatgtcacttattgtagtcttatctattatccacct
cattttacatgaaaaatgtataattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77398591_77399406
seq2: B6Ng01-291B01.b_45_860

seq1  GAATTCACTCACTCTAGTAAGTTTGTAATGAACGTCTTACATGTAGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACTCTAGTAAGTTTGTAATGAACGTCTTACATGTAGGAAC  50

seq1  ATTTTAAATTAAAAGAGTTTAATATATCCTCTTCAATCTCTATGTTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATTAAAAGAGTTTAATATATCCTCTTCAATCTCTATGTTTCTC  100

seq1  ATTTTATTTGTTCTTGCCCCTGGCTAGGGACTCACATATTAAAGTTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTGTTCTTGCCCCTGGCTAGGGACTCACATATTAAAGTTACCT  150

seq1  GAGCAAACACTGTTGTCCTTTCCCAGTCCTATGATCATTTACTCTTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAACACTGTTGTCCTTTCCCAGTCCTATGATCATTTACTCTTGTGT  200

seq1  AGGCATGCTGGCTATAAATGTTAATGGCGATACCTTATCAGTCTTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCTGGCTATAAATGTTAATGGCGATACCTTATCAGTCTTGACTT  250

seq1  CTTTTTATGAGTTGGTTTAAAAATATTGCTCATATTATTCTTTGGGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGAGTTGGTTTAAAAATATTGCTCATATTATTCTTTGGGTAGT  300

seq1  TGAGTCATCTGGGAGAAATGACCTCAAGTAACTTTTCACATTCTAAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATCTGGGAGAAATGACCTCAAGTAACTTTTCACATTCTAAGTAT  350

seq1  CTATTTTTATGTTTTCTGTGCAGTGTGTCCCTCCACATTATTTCTCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTATGTTTTCTGTGCAGTGTGTCCCTCCACATTATTTCTCTATT  400

seq1  TCTATTTAATTCTTCTCTTTGTATTATTATTTTTAAATGTTCCTTATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTAATTCTTCTCTTTGTATTATTATTTTTAAATGTTCCTTATATA  450

seq1  TTCTATATAAAACCTCTTTTTGAGAACAGTATTGATGAATATTTATCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATAAAACCTCTTTTTGAGAACAGTATTGATGAATATTTATCTCA  500

seq1  ATTGTTGTATTTCATTGCACAAACTATATTTTGAAAATTATTTTTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTATTTCATTGCACAAACTATATTTTGAAAATTATTTTTATATT  550

seq1  TGTCTAAATTGATGTGTTAATGAAACTTAGTGTTTTTCCTCCTATCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAATTGATGTGTTAATGAAACTTAGTGTTTTTCCTCCTATCAAAA  600

seq1  CTACCTGGACATTTTAATTTAAAGGCATCACAATTTTTGATATAAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGGACATTTTAATTTAAAGGCATCACAATTTTTGATATAAAATTA  650

seq1  ATTAACTTCAATATGGTTAACCCATTGCATCACACTTAACAATATACGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTCAATATGGTTAACCCATTGCATCACACTTAACAATATACGTA  700

seq1  TTAACTTCTAACTCATTGTTTTGAATTACTGTTTTTAATGGAGAGTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCTAACTCATTGTTTTGAATTACTGTTTTTAATGGAGAGTTTTA  750

seq1  GAAAATAAAATGTTGAGTTGTTTCCTGTTCTTTCTCCATCAGGATACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAATGTTGAGTTGTTTCCTGTTCTTTCTCCATCAGGATACTAA  800

seq1  ATGGGTTCAAGCAATA  816
      ||||||||||||||||
seq2  ATGGGTTCAAGCAATA  816


seq1: chr17_77508681_77509309
seq2: B6Ng01-291B01.g_69_697 (reverse)

seq1  ATATCAATGGACAAGTTAGCATTAAAGGGAACATTTTTCAGGTCCCGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATGGACAAGTTAGCATTAAAGGGAACATTTTTCAGGTCCCGACT  50

seq1  CTAGATAAAGAATTAGAGGCAATGCATGGTGCATGTAGTGGGGAGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAAAGAATTAGAGGCAATGCATGGTGCATGTAGTGGGGAGAAGGA  100

seq1  GAATGAACCTATCCCAAAATTGAGCCACCTTACAGGTTGCCCAGTGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACCTATCCCAAAATTGAGCCACCTTACAGGTTGCCCAGTGCAGA  150

seq1  GTGGTCAGCCCTGAAATCTTATGCACACTGTCATTAAAAATAGACTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCAGCCCTGAAATCTTATGCACACTGTCATTAAAAATAGACTTAGC  200

seq1  AATTTCTGTTGATTCATTCTTTTACTTACAAGTATATAGACATTTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTTGATTCATTCTTTTACTTACAAGTATATAGACATTTATATT  250

seq1  TATGTAGCAACAATAACCAAATAAAAAGAGATTATATACTTGATAGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCAACAATAACCAAATAAAAAGAGATTATATACTTGATAGTGAC  300

seq1  ACAGGAGTTCTTTGAGGAAGGGCAACAGGTAGGGACTGGAGGAAGATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTTCTTTGAGGAAGGGCAACAGGTAGGGACTGGAGGAAGATGGT  350

seq1  GGGGATGTAATTCTATTTCAATGAAAGTCAAATAAAAATTCAGTACATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGTAATTCTATTTCAATGAAAGTCAAATAAAAATTCAGTACATAC  400

seq1  CGGAATATTTTGAATAATGCAGAAAAAATTTCTATTTTGTTTTCTTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATATTTTGAATAATGCAGAAAAAATTTCTATTTTGTTTTCTTATTG  450

seq1  TTTTTTAATAGATGTCTGAAGTCCAGAAGTTTTATTGCAGGGTATAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATAGATGTCTGAAGTCCAGAAGTTTTATTGCAGGGTATAATAG  500

seq1  ATATTGCAAGGTATTGGATATTATTGCAGGGTATCATAGATATTGCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCAAGGTATTGGATATTATTGCAGGGTATCATAGATATTGCAAGG  550

seq1  TATTGAATACATTCAAAGTACTTAAAATTTAGTTCTGCCAGCAATGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATACATTCAAAGTACTTAAAATTTAGTTCTGCCAGCAATGAGTA  600

seq1  GACATGGAAACGTCTTGAGAAAGGAATTC  629
      |||||||||||||||||||||||||||||
seq2  GACATGGAAACGTCTTGAGAAAGGAATTC  629


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