MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-292N02
Chromosome	17 (Build37)
Map Location	85,564,556 - 85,710,007
singlet/doublet	doublet
Overlap gene	1700106N22Rik
Upstream gene	Zfp36l2, Thada, Plekhh2, Dync2li1, Abcg5, Abcg8, Lrpprc, LOC668848, 1110020A21Rik, Ppm1b, Slc3a1, Prepl, LOC100043901
Downstream gene	EG668850, LOC383282, LOC100043902, Six3, LOC100043717, Six2, LOC100043903, Srbd1, LOC545228, Prkce
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zfp36l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12193 MGI:107945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thada (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240174 MGI:3039623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 3 Proteins

name	Plekhh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213556 MGI:2146813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dync2li1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213575 MGI:1913996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcg5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27409 MGI:1351659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcg8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67470 MGI:1914720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrpprc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72416 MGI:1919666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668848 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668848
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	1110020A21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68531 MGI:1915781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Ppm1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19043 MGI:101841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc3a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20532 MGI:1195264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prepl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213760 MGI:2441932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	1700106N22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73582 MGI:1920832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668850 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668850 MGI:3648831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 574 ESTs, 7 Proteins pseudo : _no_value

name	LOC383282 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100043902 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs

name	Six3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20473 MGI:102764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043717 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins

name	Six2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20472 MGI:102778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043903 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Srbd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78586 MGI:1925836
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 1 Protein

name	LOC545228 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Prkce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18754 MGI:97599
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp36l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253917 GeneID:12193 MGI:107945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 36, C3H type-like 2 transcript_id : NM_001001806.2

name	Thada (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268929 GeneID:240174 MGI:3039623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 3 Proteins product : thyroid adenoma associated transcript_id : XM_619495.4

name	Plekhh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357535 GeneID:213556 MGI:2146813
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 transcript_id : NM_177606.3

name	Dync2li1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986540 GeneID:213575 MGI:1913996
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 2 light intermediate chain 1 transcript_id : NM_172256.1

name	Abcg5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14141177 GeneID:27409 MGI:1351659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family G (WHITE), member 5 transcript_id : NM_031884.1

name	Abcg8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475677 GeneID:67470 MGI:1914720
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family G (WHITE), member 8 transcript_id : NM_026180.2

name	Lrpprc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031975 GeneID:72416 MGI:1919666
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich PPR-motif containing transcript_id : NM_028233.2

name	1110020A21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402190 GeneID:68531 MGI:1915781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1110020A21 gene transcript_id : XM_148821.4

name	Ppm1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859599 GeneID:19043 MGI:101841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1B, magnesium dependent, beta isoform transcript_id : NM_011151.1

name	Slc3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120878 GeneID:20532 MGI:1195264
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 3, member 1 transcript_id : NM_009205.2

name	Prepl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981860 GeneID:213760 MGI:2441932
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prolyl endopeptidase-like transcript_id : NM_145984.2

name	LOC100043901 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268931 GeneID:100043901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043901 transcript_id : XM_001481204.1

name	1700106N22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802462 GeneID:73582 MGI:1920832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700106N22 gene transcript_id : NM_028576.2

name	LOC100043902 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268934 GeneID:100043902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs product : hypothetical protein LOC100043902 transcript_id : XM_001481207.1

name	Six3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130181 GeneID:20473 MGI:102764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sine oculis-related homeobox 3 homolog (Drosophila) transcript_id : NM_011381.3

name	LOC100043717 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268826 GeneID:100043717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001480803.1

name	Six2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859627 GeneID:20472 MGI:102778
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sine oculis-related homeobox 2 homolog (Drosophila) transcript_id : NM_011380.1

name	LOC100043903 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268936 GeneID:100043903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043903 transcript_id : XM_001481208.1

name	Srbd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268828 GeneID:78586 MGI:1925836
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 1 Protein product : S1 RNA binding domain 1 transcript_id : XM_001480810.1

name	LOC545228 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268830 GeneID:545228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC545228 transcript_id : XM_001480818.1

name	Prkce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755083 GeneID:18754 MGI:97599
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, epsilon transcript_id : NM_011104.1

name	Zfp36l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49249965 CCDS:CCDS28998.1 GeneID:12193 MGI:107945
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0043488 - regulation of mRNA stability [Evidence IDA] codon_start : 1 note : butyrate response factor 2 product : zinc finger protein 36, C3H type-like 2 protein_id : NP_001001806.1

name	Thada (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268930 GeneID:240174 MGI:3039623
definition	codon_start : 1 product : thyroid adenoma associated protein_id : XP_619495.3

name	Plekhh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243976 CCDS:CCDS28999.1 GeneID:213556 MGI:2146813
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein_id : NP_808274.1

name	Dync2li1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986541 CCDS:CCDS29000.1 GeneID:213575 MGI:1913996
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0042384 - cilium biogenesis [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP] codon_start : 1 product : dynein 2 light intermediate chain protein_id : NP_758460.1

name	Abcg5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14141178 CCDS:CCDS29001.1 GeneID:27409 MGI:1351659
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sterolin; ATP-binding cassette sub-family G member 5 product : ATP-binding cassette, subfamily G, member 5 protein_id : NP_114090.1

name	Abcg8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17530789 CCDS:CCDS29002.1 GeneID:67470 MGI:1914720
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP-binding cassette, sub-family G (WHITE), member 8 protein_id : NP_080456.1

name	Lrpprc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134031976 CCDS:CCDS29003.1 GeneID:72416 MGI:1919666
definition	GO_component : GO:0000794 - condensed nuclear chromosome [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0051015 - actin filament binding [Evidence ISS]; GO:0048487 - beta-tubulin binding [Evidence ISS]; GO:0005488 - binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IDA] codon_start : 1 note : leucine rich protein LRP130 product : leucine-rich PPR motif-containing protein protein_id : NP_082509.2

name	1110020A21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20901299 GeneID:68531 MGI:1915781
definition	codon_start : 1 product : hypothetical protein LOC68531 protein_id : XP_148821.1

name	Ppm1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859600 GeneID:19043 MGI:101841
definition	GO_component : GO:0008287 - protein serine/threonine phosphatase complex [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 function : phophatase product : protein phosphatase 1B, magnesium dependent, beta isoform protein_id : NP_035281.1

name	Slc3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120879 GeneID:20532 MGI:1195264
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 3, member 1 protein_id : NP_033231.2

name	Prepl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981861 CCDS:CCDS29005.1 GeneID:213760 MGI:2441932
definition	GO_function : GO:0004287 - prolyl oligopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : prolyl endopeptidase-like protein_id : NP_666096.2

name	LOC100043901 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268932 GeneID:100043901
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481254.1

name	1700106N22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249226 GeneID:73582 MGI:1920832
definition	codon_start : 1 product : hypothetical protein LOC73582 protein_id : NP_082852.1

name	LOC100043902 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268935 GeneID:100043902
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481257.1

name	Six3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59939908 GeneID:20473 MGI:102764
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001654 - eye development [Evidence IDA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : sine oculis-related homeobox 3 homolog protein_id : NP_035511.2

name	LOC100043717 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268827 GeneID:100043717
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480853.1

name	Six2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859628 CCDS:CCDS29007.1 GeneID:20472 MGI:102778
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : sine oculis-related homeobox 2 homolog protein_id : NP_035510.1

name	LOC100043903 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268937 GeneID:100043903
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481258.1

name	Srbd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268829 GeneID:78586 MGI:1925836
definition	codon_start : 1 product : S1 RNA binding domain 1 protein_id : XP_001480860.1

name	LOC545228 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268831 GeneID:545228
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480868.1

name	Prkce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755084 CCDS:CCDS29008.1 GeneID:18754 MGI:97599
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004699 - calcium-independent protein kinase C activity [Evidence IDA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007635 - chemosensory behavior [Evidence TAS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP] codon_start : 1 product : protein kinase C, epsilon protein_id : NP_035234.1

name	LOC668848 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668848
definition	number : 1 pseudo : _no_value

name	LOC668848 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668848
definition	number : 2 pseudo : _no_value

name	LOC668848 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668848
definition	number : 3 pseudo : _no_value

name	LOC383282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383282
definition	number : 1 pseudo : _no_value

name	EG668850 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268933 GeneID:668850 MGI:3648831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 574 ESTs, 7 Proteins product : predicted gene, EG668850 pseudo : _no_value transcript_id : XR_002259.2

clone name	MSMg01-488L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178C21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-087B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096M09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-207I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-292N02.b	B6Ng01-292N02.g
ACC	GA089358	GA089359
length	1,199	909
definition	B6Ng01-292N02.b	B6Ng01-292N02.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(85,564,556 - 85,565,734)	(85,709,100 - 85,710,007)
sequence	gaattctctggcaaacttctgccagcttcagagtataactgagaccttcc cttcctgctgaagcctcctccccttgtattatagcatttggggcacccag ttattcttgatgtcagccatgcctccgtctgctggaactggggtggtttt tacatcgctaacatctggcgtgaatctcttcttctgggaggttgtaataa atgcttggatgactgaaggaataagtgaatgaaaaaaaaatcccgcctcg tgttcaacgcctgcttgggtccttccatcccacctcatgtttgaagcgtg ctgggtccttccggcccatcttttcttttgtgctatttaatcttttttct tgtcacacattttcctgtccccctccagtagatgttagagttcaggaaat ctgcgtttgaagatttaaaatatagtgctttgaactccttagaggaaaag ctatgaataaataattagactcatttcacatcaaaatctaaagtgtggaa aaaaaagttcgtatcatttggtgctttattcacgtgtatggtaatctgat ggcacatccattgttaacacagagctacactgaaatattttactctcggg gcttttcatgtgacagaagacggcttttttgaaaatgaaaaagctcctgt ccctggcatgccaagttgaaatttgttagttttgaaaagcgtggataaat ataactgtgttttcctcggacagtacttgagaagttcccgcctgcatcag tgttgcacatgagcgcatacgacagtcctgccgactttggggggggtgta aatcagggtgttgccgaggagctgcttagcgttttcctgagggtgaagtg cttaggtttggaatttaattgcaggttttacgtttaagctgttcagtatt attctcataaaggttctaatacatttcgtgctctgtagtttcacaggctt agtcaacacagttgaaagacatcatcttcaataatgaagccagaaatgaa aaaaaggttgatcacgcacgtggctgcttgggacgctgaacaaatagcgt atgacttcttcatgttctaataaggtaagaactgtggggtgttgttttat cttcctgcaattgaatatcgaacctgtaaacaaaggaaaaatgtaacgct gtgcagctctgccaagggtgtgcgttctgttctctcacttgtatgtgtg	gaattccacctccatggaatcctcttaattatggcttctccatctccaga tgcttttgtctccatagacgatgaaaaattaagaaggagaagaaataaag gaaaagaagagggaacccggcagagggtagaattgttgccacagtcttct tgggagaggacaagaggtgagaaaaggtctgggggccttggaattgcatt tcctctgcattcagctgagtctgtcactggctgaggacctcacactggga cccaaacaatataacactcagacggagaggatgggggtactcgctcaggt tggccaaatagggttagccaccaatacactccttgttcagttttctctaa agccacaatgtatccgataatgaaagctaacaactctatcataaagccta ctggagaactaacaagcacgctttggagaaggaaaactcaacagtaaaaa caccctagccccgcagcacattcgatttagaagactccgagggaatggag ggcttgagaagatgatggtaatcaaagaaaacagagactggtaactcctg cctctccttatcaccatcataacacatgccaaaattaactgtattattca ctactcaaacttaaatttgggagatgacgggatcctggagacaggagtga tgttataaagaagtctaatctgcatcagctgactctttacccaaacctta tggaaatcccagtttctagtcaaagatgtgttatagagcagggtctttcc atccccatttgctacaaaaaaaaattccaaaatcaccataaaacctaaaa aaaaattaattactttgacattccccctaaagtagaaatactacttccat ccaaccagtctctctcgcctgcatatcacctccccactcaaccccagtgg ggtgtgtgt
quality values	Open. Hide. 58 36 22 27 62 62 62 62 62 62 49 47 39 62 62 62 62 62 62 54 47 62 44 33 62 62 62 62 47 44 51 62 59 40 40 51 50 32 38 56 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 38 40 58 58 58 58 54 54 58 58 54 58 58 54 58 49 58 58 52 58 52 58 58 58 58 58 53 58 58 45 58 58 58 49 58 58 54 58 54 58 58 58 58 58 58 58 58 58 52 52 51 58 58 58 58 50 58 50 58 54 53 58 39 46 58 48 58 58 58 58 58 58 49 52 58 58 49 47 58 58 58 58 58 58 50 58 50 50 58 49 58 53 51 58 58 49 54 58 53 42 51 58 51 41 35 58 49 58 49 44 58 58 37 50 58 51 58 50 52 42 50 58 58 58 51 49 50 58 58 51 50 47 50 53 58 49 38 42 38 54 49 53 45 53 40 54 50 54 54 52 51 54 54 49 35 37 53 46 42 50 40 31 29 37 45 42 42 45 53 53 53 51 34 51 51 32 51 45 28 54 51 45 52 47 37 42 52 37 53 42 42 32 33 53 45 53 42 42 38 47 38 47 46 33 22 54 40 52 37 52 36 45 26 39 29 34 31 23 39 53 33 53 31 51 32 42 25 32 51 53 40 52 51 52 49 49 49 41 31 52 33 18 53 32 45 39 7 10 30 40 28 42 31 37 31 18 46 18 46 18 20 31 17 31 43 31 31 31 42 37 10 38 30 32 51 51 41 33 36 31 30 51 14 46 46 31 31 31 41 31 31 32 24 34 46 25 19 11 13 46 22 21 20 20 31 46 47 33 23 31 25 27 31 28 27 22 31 13 48 48 46 31 41 23 29 48 27 27 39 26 29 31 31 21 31 33 32 31 26 30 34 31 31 30 38 41 27 32 31 32 32 46 31 25 27 10 28 31 21 20 5 7 23 37 28 36 48 35 25 17 6 26 31 38 34 27 31 31 33 20 38 48 38 31 20 25 11 6 14 17 21 16 21 7 19 27 11 10 25 4 6 12 7 26 23 29 32 43 32 24 32 13 23 23 25 13 23 22 20 24 13 9 6 16 9 33 31 32 27 38 15 18 16 19 16 28 48 32 34 32 27 43 43 43 48 48 15 29 11 15 15 16 20 28 24 15 25 10 26 15 8 9 6 10 19 9 12 17 3 9 11 27 34 7 7 11 16 28 28 21 30 21 11 9 32 20 24 26 6 12 11 13 14 10 7 13 6 11 11 28 13 28 14 13 9 6 6 9 16 17 6 3 13 4 11 5 4 24 6 5 6 5 11 8 6 4 1 3 14 3 7 5 11 6 4 6 6 24 26 12 18 21 14 8 12 9 15 4 6 16 9 16 8 5 9 16 10 7 4 1 3 4 17 14 5 6 20 15 4 3 5 7 11 7 18 16 7 4 18 17 17 17 9 5 4 5 8 13 16 8 10 8 1 5 4 3 6 4 1 4 4 14 6 3 6 4 1 4 13 1 8 8 4 4 7 4 8 4 7 7 12 10 8 5 5 4 4 11 6 9 13 21 5 9 7 4 11 5 5 4 6	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr17_85564556_85565734
seq2: B6Ng01-292N02.b_46_1244

seq1  GAATTCTCTGGCAAACTTCTGCCAGCTTCAGAGTATAACTGAGACCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCAAACTTCTGCCAGCTTCAGAGTATAACTGAGACCTTCC  50

seq1  CTTCCTGCTGAAGCCTCCTCCCCTTGTATTATAGCATTTGGGGCACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCTGAAGCCTCCTCCCCTTGTATTATAGCATTTGGGGCACCCAG  100

seq1  TTATTCTTGATGTCAGCCATGCCTCCGTCTGCTGGAACTGGGGTGGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTGATGTCAGCCATGCCTCCGTCTGCTGGAACTGGGGTGGTTTT  150

seq1  TACATCGCTAACATCTGGCGTGAATCTCTTCTTCTGGGAGGTTGTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCGCTAACATCTGGCGTGAATCTCTTCTTCTGGGAGGTTGTAATAA  200

seq1  ATGCTTGGATGACTGAAGGAATAAGTGAATGAAAAAAAAATCCCGCCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGATGACTGAAGGAATAAGTGAATGAAAAAAAAATCCCGCCTCG  250

seq1  TGTTCAACGCCTGCTTGGGTCCTTCCATCCCACCTCATGTTTGAAGCGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAACGCCTGCTTGGGTCCTTCCATCCCACCTCATGTTTGAAGCGTG  300

seq1  CTGGGTCCTTCCGGCCCATCTTTTCTTTTGTGCTATTTAATCTTTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCCTTCCGGCCCATCTTTTCTTTTGTGCTATTTAATCTTTTTTCT  350

seq1  TGTCACACATTTTCCTGTCCCCCTCCAGTAGATGTTAGAGTTCAGGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACATTTTCCTGTCCCCCTCCAGTAGATGTTAGAGTTCAGGAAAT  400

seq1  CTGCGTTTGAAGATTTAAAATATAGTGCTTTGAACTCCTTAGAGGAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTTTGAAGATTTAAAATATAGTGCTTTGAACTCCTTAGAGGAAAAG  450

seq1  CTATGAATAAATAATTAGACTCATTTCACATCAAAATCTAAAGTGTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATAAATAATTAGACTCATTTCACATCAAAATCTAAAGTGTGGAA  500

seq1  AAAAAAGTTCGTATCATTTGGTGCTTTATTCACGTGTATGGTAATCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTTCGTATCATTTGGTGCTTTATTCACGTGTATGGTAATCTGAT  550

seq1  GGCACATCCATTGTTAACACAGAGCTACACTGAAATATTTTACTCTCGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCCATTGTTAACACAGAGCTACACTGAAATATTTTACTCTCGGG  600

seq1  GCTTTTCATGTGACAGAAGACGGCTTTTTTGAAAATGAAAAAGCTCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCATGTGACAGAAGACGGCTTTTTTGAAAATGAAAAAGCTCCTGT  650

seq1  CCCTGGCATGCCAAGTTGAAATTTGTTAGTTTTGAAAAGCGTGGATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCATGCCAAGTTGAAATTTGTTAGTTTTGAAAAGCGTGGATAAAT  700

seq1  ATAACTGTGTTTTCCTCGGACAGTACTTGAGAAGTTCCCGCCTGCATCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGTGTTTTCCTCGGACAGTACTTGAGAAGTTCCCGCCTGCATCAG  750

seq1  TGTTGCACATGAGCGCATACGACAGTCCTGCCGACTTT-GGGGGGGTGTA  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTGCACATGAGCGCATACGACAGTCCTGCCGACTTTGGGGGGGGTGTA  800

seq1  AATCAGGGGTGTTGCCGAGGAGCTGCTTAGCGTTTTCCTGAGGGTGAAGT  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCA-GGGTGTTGCCGAGGAGCTGCTTAGCGTTTTCCTGAGGGTGAAGT  849

seq1  GCTTAGGTTTGGAATTTAATTGCAGGTTTTACGTTTAAGCTGTTCAGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTTTGGAATTTAATTGCAGGTTTTACGTTTAAGCTGTTCAGTAT  899

seq1  TATTCTCATAAAGGTTCT-ATACATTTCGTGCTCTGTAGTTTCACAGGCT  948
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATTCTCATAAAGGTTCTAATACATTTCGTGCTCTGTAGTTTCACAGGCT  949

seq1  TAGTCACCACAGTTGAAAGACATCATCTTC-ATAATGAAGCCAGAAATG-  996
      |||||| ||||||||||||||||||||||| |||||||||||||||||| 
seq2  TAGTCAACACAGTTGAAAGACATCATCTTCAATAATGAAGCCAGAAATGA  999

seq1  AAAAAAGGTTGATCACGCACGGTGGCTGGCTGGGACGCTGAAC-AATAGC  1045
      |||||||||||||||||||| |||||||  ||||||||||||| ||||||
seq2  AAAAAAGGTTGATCACGCAC-GTGGCTGCTTGGGACGCTGAACAAATAGC  1048

seq1  GTATGACTTCTTCATG-TCTATTAAGTTA--GACTGTGGGGTGT--GTTT  1090
      |||||||||||||||| |||| |||| ||   ||||||||||||   |||
seq2  GTATGACTTCTTCATGTTCTAATAAGGTAAGAACTGTGGGGTGTTGTTTT  1098

seq1  ATCTTCCTGCAAT--GATACCGAA-CTGT-AACAA---GAAAATGTAACG  1133
      |||||||||||||   ||| |||| |||| |||||    |||||||||||
seq2  ATCTTCCTGCAATTGAATATCGAACCTGTAAACAAAGGAAAAATGTAACG  1148

seq1  CTGTGCAGCTCTGCCAGGGGGTGTGCG-TCTGT--TCTCACTTG---GTG  1177
      ||||||||||||||||  ||||||||| |||||  |||||||||   |||
seq2  CTGTGCAGCTCTGCCA-AGGGTGTGCGTTCTGTTCTCTCACTTGTATGTG  1197

seq1  TG  1179
      ||
seq2  TG  1199

seq1: chr17_85709100_85710007
seq2: B6Ng01-292N02.g_67_975 (reverse)

seq1  ACACACACCCCACTGGGGTTGAGTGGGGAGGTGATATGCAGGCGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCCCACTGGGGTTGAGTGGGGAGGTGATATGCAGGCGAGAGAG  50

seq1  ACTGGTTGGATGGAAGTAGTATTTCTACTTTAGGGGGAATGTCAAAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTGGATGGAAGTAGTATTTCTACTTTAGGGGGAATGTCAAAGTAA  100

seq1  TTAATTTTTTTTTAGGTTTTATGGTGATTTTGGAA-TTTTTTTTGTAGCA  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTAATTTTTTTTTAGGTTTTATGGTGATTTTGGAATTTTTTTTTGTAGCA  150

seq1  AATGGGGATGGAAAGACCCTGCTCTATAACACATCTTTGACTAGAAACTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGATGGAAAGACCCTGCTCTATAACACATCTTTGACTAGAAACTG  200

seq1  GGATTTCCATAAGGTTTGGGTAAAGAGTCAGCTGATGCAGATTAGACTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCCATAAGGTTTGGGTAAAGAGTCAGCTGATGCAGATTAGACTTC  250

seq1  TTTATAACATCACTCCTGTCTCCAGGATCCCGTCATCTCCCAAATTTAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAACATCACTCCTGTCTCCAGGATCCCGTCATCTCCCAAATTTAAG  300

seq1  TTTGAGTAGTGAATAATACAGTTAATTTTGGCATGTGTTATGATGGTGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTAGTGAATAATACAGTTAATTTTGGCATGTGTTATGATGGTGAT  350

seq1  AAGGAGAGGCAGGAGTTACCAGTCTCTGTTTTCTTTGATTACCATCATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGGCAGGAGTTACCAGTCTCTGTTTTCTTTGATTACCATCATCT  400

seq1  TCTCAAGCCCTCCATTCCCTCGGAGTCTTCTAAATCGAATGTGCTGCGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCCCTCCATTCCCTCGGAGTCTTCTAAATCGAATGTGCTGCGGG  450

seq1  GCTAGGGTGTTTTTACTGTTGAGTTTTCCTTCTCCAAAGCGTGCTTGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTGTTTTTACTGTTGAGTTTTCCTTCTCCAAAGCGTGCTTGTTA  500

seq1  GTTCTCCAGTAGGCTTTATGATAGAGTTGTTAGCTTTCATTATCGGATAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAGTAGGCTTTATGATAGAGTTGTTAGCTTTCATTATCGGATAC  550

seq1  ATTGTGGCTTTAGAGAAAACTGAACAAGGAGTGTATTGGTGGCTAACCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGCTTTAGAGAAAACTGAACAAGGAGTGTATTGGTGGCTAACCCT  600

seq1  ATTTGGCCAACCTGAGCGAGTACCCCCATCCTCTCCGTCTGAGTGTTATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCCAACCTGAGCGAGTACCCCCATCCTCTCCGTCTGAGTGTTATA  650

seq1  TTGTTTGGGTCCCAGTGTGAGGTCCTCAGCCAGTGACAGACTCAGCTGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGGTCCCAGTGTGAGGTCCTCAGCCAGTGACAGACTCAGCTGAA  700

seq1  TGCAGAGGAAATGCAATTCCAAGGCCCCCAGACCTTTTCTCACCTCTTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGAAATGCAATTCCAAGGCCCCCAGACCTTTTCTCACCTCTTGT  750

seq1  CCTCTCCCAAGAAGACTGTGGCAACAATTCTACCCTCTGCCGGGTTCCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCAAGAAGACTGTGGCAACAATTCTACCCTCTGCCGGGTTCCCT  800

seq1  CTTCTTTTCCTTTATTTCTTCTCCTTCTTAATTTTTCATCGTCTATGGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTCCTTTATTTCTTCTCCTTCTTAATTTTTCATCGTCTATGGAG  850

seq1  ACAAAAGCATCTGGAGATGGAGAAGCCATAATTAAGAGGATTCCATGGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCATCTGGAGATGGAGAAGCCATAATTAAGAGGATTCCATGGAG  900

seq1  GTGGAATTC  908
      |||||||||
seq2  GTGGAATTC  909

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information