BAC Information

Click to search

BAC

Clone NameB6Ng01-293F24
Chromosome17 (Build37)
Map Location 92,064,991 - 92,065,284
singlet/doubletsinglet
Overlap geneLOC100043742
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741
Downstream geneEG640442, LOC627395, LOC676141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293F24.bB6Ng01-293F24.g
ACCGA089774GA089775
length2941,201
definitionB6Ng01-293F24.b B6Ng01-293F24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acattccataacaattgccatttttttttagtctgatacacagagatata
gtttcaaagacaaataagacagttacgggtcatactgaatatgagttatt
taaaagtacaaaaacacagaggtcatgataactgtattcaaatgttgatg
tgataaatgtatgcaaaaattattgggcattaatgaacatgagtaaaagt
tctgtggttctctggcctcaagttcaggagtacctatccaatacaaatca
gatgccttgtactttgtgtgtatgtgtgtgtggggtgttgtttc

gaattcagctggaactgacttggaaaacttatctctgaaaaaaagatttc
ataatatcccaaaggagaaaagcaatgtaatcactagtcctagtcaactg
tagattctgtaaccatgacaatgactaggctagcaagataccttcagtaa
aactacagtaaatgttttactgacaattctattttaggaaaacacactat
gaccaatgcaactcttataaaataaagcatttaattaggtgcttgcttac
attttctgagattcagtttattgttgttgtttgttgtttttgttgttatt
gttgctgctgctgctgttgctgctgctgctgttgctgctgctgctgctgt
tgctgctgctgctgttgctgctgctgctgctgttgctatggaaccaaaga
acttgagcagtagcagaaagcttcatctagaaccacaggcagaaaccaag
agccctttgcctaatatatgcttttaaaacctcaaagcacatgcccagtg
acacacttcctccaacaattccacacctatgaatctttctaatcctatca
aagaattccaatccctgattactaagtgtggagagctttgggggctgctt
tgaggaatttggcaagaatttgacattgtgccaagacatagaagtagaat
caggcaggaatttgactttgggccaggactaggatattggctcaagatga
atagaattgaggaatgtgctctttgtattttgatgggtcttgttaagaac
ctgaatacaataataacgggatctttgtctatgctttgtttcttaactgc
tttgtttatgctttaggactgaccaaattctttgtatgtacctagaatga
tataaaccagacttggaaaacaaaaaacccacttcagcctcagcactggc
tggtgttatattataatatcatctaatggtctttttttttttttttccct
tttcaatcttccctccctggagactctgttgactgactgagctggcttgg
tcagatggcaccttcaattgttggaatgcaagtacaaaaagtacaagtgc
aacacaatacaggaaaagatggggtggtgccaaaagaaaagttggcccaa
gtgtatgaataattcttgtaagaacaagctaatgtaaattgcctttggta
atggttaagagttatgctcttaacttccttaatgagagcccacgagatat
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92064991_92065284
seq2: B6Ng01-293F24.b_55_348

seq1  ACATTCCATAACAATTGCCATTTTTTTTTAGTCTGATACACAGAGATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCATAACAATTGCCATTTTTTTTTAGTCTGATACACAGAGATATA  50

seq1  GTTTCAAAGACAAATAAGACAGTTACGGGTCATACTGAATATGAGTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAAGACAAATAAGACAGTTACGGGTCATACTGAATATGAGTTATT  100

seq1  TAAAAGTACAAAAACACAGAGGTCATGATAACTGTATTCAAATGTTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTACAAAAACACAGAGGTCATGATAACTGTATTCAAATGTTGATG  150

seq1  TGATAAATGTATGCAAAAATTATTGGGCATTAATGAACATGAGTAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATGTATGCAAAAATTATTGGGCATTAATGAACATGAGTAAAAGT  200

seq1  TCTGTGGTTCTCTGGCCTCAAGTTCAGGAGTACCTATCCAATACAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTTCTCTGGCCTCAAGTTCAGGAGTACCTATCCAATACAAATCA  250

seq1  GATGCCTTGTACTTTGTGTGTATGTGTGTGTGGGGTGTTGTTTC  294
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTTGTACTTTGTGTGTATGTGTGTGTGGGGTGTTGTTTC  294


| Home | SequenceCutter | Blast | Download |